FFCP PHASE1:Hg19::chr3:110690180..110690194,-: Difference between revisions
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|id=chr3:110690180..110690194,-
|short_description=p4@AK098733
|description=CAGE_peak_4_at_AK098733_5end
|association_with_transcript=-410bp_to_AK098733_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-410bp_to_AK098733_5end | |||
|cluster_id=chr3:110690180..110690194,- | |||
|coexpression_cluster_id=C4261 | |||
|description=CAGE_peak_4_at_AK098733_5end | |||
|id=chr3:110690180..110690194,- | |||
|ontology_enrichment_celltype=CL:0002150!1.86e-09!3;CL:0000861!1.86e-09!3;CL:0002178!2.30e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000054;2.74e-12;2!CL:0002097;2.74e-12;2!CL:0000137;2.74e-12;2!CL:0000092;2.74e-12;2!CL:0000174;1.26e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,2.59e-12,2;CL:0000054,3.24e-12,2;CL:0000137,3.24e-12,2;CL:0000092,3.24e-12,2;CL:0000174,1.21e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.38e-15!235;DOID:14566!8.89e-15!239;DOID:0050687!5.80e-11!143;DOID:6193!3.55e-08!1;DOID:0060085!4.35e-08!1;DOID:3165!4.35e-08!1;DOID:0060121!4.35e-08!1;DOID:2438!4.35e-08!1;DOID:4418!4.35e-08!1;DOID:4960!5.33e-08!1;DOID:0070004!5.33e-08!1;DOID:1036!5.37e-08!8;DOID:305!9.78e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.67e-23;1!DOID:3165;3.67e-23;1!DOID:0060121;3.67e-23;1!DOID:2438;3.67e-23;1!DOID:4418;3.67e-23;1!DOID:6193;3.67e-23;1!DOID:200;2.74e-12;2!DOID:3350;2.74e-12;2!DOID:4305;2.74e-12;2!DOID:4556;8.31e-09;3!DOID:0060072;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.62e-23,1;DOID:0060085,5.13e-23,1;DOID:3165,5.13e-23,1;DOID:0060121,5.13e-23,1;DOID:2438,5.13e-23,1;DOID:4418,5.13e-23,1;DOID:3350,2.32e-12,2;DOID:200,3.24e-12,2;DOID:4305,3.24e-12,2;DOID:4556,8.31e-09,3;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239;DOID:0060072,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001282!2.89e-08!1;UBERON:0009842!2.89e-08!1;UBERON:0003704!2.89e-08!1;UBERON:0001171!2.89e-08!1;UBERON:0001172!2.89e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;1.33e-23;1!UBERON:0009842;1.33e-23;1!UBERON:0003704;1.33e-23;1!UBERON:0001171;1.33e-23;1!UBERON:0001172;1.33e-23;1!UBERON:0001280;8.96e-09;3!UBERON:0004647;8.96e-09;3!UBERON:0002369;1.26e-08;3!UBERON:0001235;1.26e-08;3!UBERON:0006858;1.26e-08;3!UBERON:0002394;6.87e-07;4!UBERON:0003928;6.87e-07;4!UBERON:0000014;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,1.34e-23,1;UBERON:0009842,1.34e-23,1;UBERON:0003704,1.34e-23,1;UBERON:0001171,1.34e-23,1;UBERON:0001172,1.34e-23,1;UBERON:0001280,8.96e-09,3;UBERON:0004647,8.96e-09,3;UBERON:0005171,8.96e-09,3;UBERON:0002369,1.21e-08,3;UBERON:0001235,1.21e-08,3;UBERON:0006858,1.21e-08,3;UBERON:0000014,9.63e-07,4 | |||
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|short_description=p4@AK098733 | |||
}} | }} |
Latest revision as of 14:08, 29 July 2015
Short description: | p4@AK098733 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK098733_5end |
Coexpression cluster: | C4261_large_myeloma_mesothelioma_cholangiocellular_endometrial_epithelioid_leukemia |
Association with transcript: | -410bp_to_AK098733_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 2.59e-12 | 2 |
bone matrix secreting cell | 3.24e-12 | 2 |
osteocyte | 3.24e-12 | 2 |
osteoclast | 3.24e-12 | 2 |
steroid hormone secreting cell | 1.21e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 1.34e-23 | 1 |
acinus | 1.34e-23 | 1 |
intrahepatic bile duct | 1.34e-23 | 1 |
portal lobule | 1.34e-23 | 1 |
hepatic acinus | 1.34e-23 | 1 |
liver parenchyma | 8.96e-09 | 3 |
liver lobule | 8.96e-09 | 3 |
hepatic duct | 8.96e-09 | 3 |
adrenal gland | 1.21e-08 | 3 |
adrenal cortex | 1.21e-08 | 3 |
adrenal/interrenal gland | 1.21e-08 | 3 |
zone of skin | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.62e-23 | 1 |
organ system benign neoplasm | 5.13e-23 | 1 |
skin benign neoplasm | 5.13e-23 | 1 |
integumentary system benign neoplasm | 5.13e-23 | 1 |
dermis tumor | 5.13e-23 | 1 |
cutaneous fibrous histiocytoma | 5.13e-23 | 1 |
mesenchymal cell neoplasm | 2.32e-12 | 2 |
giant cell tumor | 3.24e-12 | 2 |
bone giant cell tumor | 3.24e-12 | 2 |
lung large cell carcinoma | 8.31e-09 | 3 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |
benign neoplasm | 9.63e-07 | 4 |