FFCP PHASE1:Hg19::chr4:138369206..138369216,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-24bp_to_ENST00000463671_5end | |association_with_transcript=-24bp_to_ENST00000463671_5end | ||
|cluster_id=chr4:138369206..138369216,+ | |||
|coexpression_cluster_id=C1598 | |coexpression_cluster_id=C1598 | ||
|description=CAGE_peak_1_at_ENST00000463671_5end | |description=CAGE_peak_1_at_ENST00000463671_5end | ||
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|ontology_enrichment_celltype=CL:0000037!7.01e-25!172;CL:0000566!7.01e-25!172;CL:0000738!1.55e-24!140;CL:0002031!3.00e-24!124;CL:0002032!4.47e-23!165;CL:0000837!4.47e-23!165;CL:0000988!2.08e-22!182;CL:0002087!8.70e-22!119;CL:0002057!3.03e-18!42;CL:0000860!1.10e-17!45;CL:0000839!2.26e-15!70;CL:0000557!1.20e-14!71;CL:0000763!2.28e-14!112;CL:0000049!2.28e-14!112;CL:0002009!4.16e-14!65;CL:0002194!3.05e-13!63;CL:0000576!3.05e-13!63;CL:0000040!3.05e-13!63;CL:0000559!3.05e-13!63;CL:0000766!4.38e-13!76;CL:0000542!1.39e-08!53;CL:0000051!1.39e-08!53;CL:0000838!2.11e-08!52;CL:0000003!3.04e-08!722;CL:0000134!3.73e-07!358;CL:0002320!6.09e-07!365 | |ontology_enrichment_celltype=CL:0000037!7.01e-25!172;CL:0000566!7.01e-25!172;CL:0000738!1.55e-24!140;CL:0002031!3.00e-24!124;CL:0002032!4.47e-23!165;CL:0000837!4.47e-23!165;CL:0000988!2.08e-22!182;CL:0002087!8.70e-22!119;CL:0002057!3.03e-18!42;CL:0000860!1.10e-17!45;CL:0000839!2.26e-15!70;CL:0000557!1.20e-14!71;CL:0000763!2.28e-14!112;CL:0000049!2.28e-14!112;CL:0002009!4.16e-14!65;CL:0002194!3.05e-13!63;CL:0000576!3.05e-13!63;CL:0000040!3.05e-13!63;CL:0000559!3.05e-13!63;CL:0000766!4.38e-13!76;CL:0000542!1.39e-08!53;CL:0000051!1.39e-08!53;CL:0000838!2.11e-08!52;CL:0000003!3.04e-08!722;CL:0000134!3.73e-07!358;CL:0002320!6.09e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.63e-21;33!CL:0002057;6.63e-21;33!CL:0000473;2.39e-16;39!CL:0000234;2.39e-16;39!CL:0000576;2.24e-13;48!CL:0000766;2.51e-10;69!CL:0002087;3.30e-08;104 | |ontology_enrichment_celltype_v019=CL:0000860;6.63e-21;33!CL:0002057;6.63e-21;33!CL:0000473;2.39e-16;39!CL:0000234;2.39e-16;39!CL:0000576;2.24e-13;48!CL:0000766;2.51e-10;69!CL:0002087;3.30e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.49e-28,136;CL:0000037,7.33e-28,168;CL:0002031,8.83e-27,120;CL:0000988,1.90e-26,177;CL:0002032,4.66e-26,161;CL:0000837,4.66e-26,161;CL:0000860,7.78e-25,42;CL:0002057,7.78e-25,42;CL:0000473,8.06e-24,48;CL:0000234,8.06e-24,48;CL:0002087,1.36e-23,115;CL:0000839,1.29e-20,66;CL:0000557,4.54e-20,67;CL:0002009,1.60e-19,61;CL:0000763,2.85e-19,108;CL:0000049,2.85e-19,108;CL:0000766,3.55e-19,72;CL:0002194,2.90e-18,59;CL:0000576,2.90e-18,59;CL:0000040,2.90e-18,59;CL:0000559,2.90e-18,59;CL:0000034,1.16e-08,441;CL:0000134,5.89e-08,354;CL:0000723,8.04e-08,433;CL:0000048,1.02e-07,427;CL:0002320,1.18e-07,361;CL:0000219,6.23e-07,386;CL:0000542,8.69e-07,53;CL:0000051,8.69e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;5.18e-18;42!CL:0000049;3.54e-07;108 | |ontology_enrichment_development_v019=CL:0002057;5.18e-18;42!CL:0000049;3.54e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.56e-13!80;UBERON:0001474!1.36e-12!86;UBERON:0004765!1.52e-11!101;UBERON:0001434!1.52e-11!101;UBERON:0002390!4.31e-10!102;UBERON:0003061!4.31e-10!102;UBERON:0002193!7.51e-09!112;UBERON:0002405!1.52e-07!115 | |ontology_enrichment_uberon=UBERON:0002371!2.56e-13!80;UBERON:0001474!1.36e-12!86;UBERON:0004765!1.52e-11!101;UBERON:0001434!1.52e-11!101;UBERON:0002390!4.31e-10!102;UBERON:0003061!4.31e-10!102;UBERON:0002193!7.51e-09!112;UBERON:0002405!1.52e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.03e-19,76;UBERON:0004765,2.08e-18,90;UBERON:0001474,4.44e-18,82;UBERON:0002405,1.00e-15,93;UBERON:0001434,3.63e-15,100;UBERON:0002390,4.34e-14,98;UBERON:0003061,4.34e-14,98;UBERON:0002193,4.79e-13,108;UBERON:0002204,2.96e-08,167 | |||
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| ||
|short_description=p1@ENST00000463671 | |short_description=p1@ENST00000463671 | ||
}} | }} |
Latest revision as of 01:39, 30 July 2015
Short description: | p1@ENST00000463671 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000463671_5end |
Coexpression cluster: | C1598_CD34_CD133_CD4_CD8_Smooth_Cardiac_acute |
Association with transcript: | -24bp_to_ENST00000463671_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.49e-28 | 136 |
hematopoietic stem cell | 7.33e-28 | 168 |
hematopoietic lineage restricted progenitor cell | 8.83e-27 | 120 |
hematopoietic cell | 1.90e-26 | 177 |
hematopoietic oligopotent progenitor cell | 4.66e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.66e-26 | 161 |
classical monocyte | 7.78e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.78e-25 | 42 |
defensive cell | 8.06e-24 | 48 |
phagocyte | 8.06e-24 | 48 |
nongranular leukocyte | 1.36e-23 | 115 |
myeloid lineage restricted progenitor cell | 1.29e-20 | 66 |
granulocyte monocyte progenitor cell | 4.54e-20 | 67 |
macrophage dendritic cell progenitor | 1.60e-19 | 61 |
myeloid cell | 2.85e-19 | 108 |
common myeloid progenitor | 2.85e-19 | 108 |
myeloid leukocyte | 3.55e-19 | 72 |
monopoietic cell | 2.90e-18 | 59 |
monocyte | 2.90e-18 | 59 |
monoblast | 2.90e-18 | 59 |
promonocyte | 2.90e-18 | 59 |
stem cell | 1.16e-08 | 441 |
mesenchymal cell | 5.89e-08 | 354 |
somatic stem cell | 8.04e-08 | 433 |
multi fate stem cell | 1.02e-07 | 427 |
connective tissue cell | 1.18e-07 | 361 |
motile cell | 6.23e-07 | 386 |
lymphocyte | 8.69e-07 | 53 |
common lymphoid progenitor | 8.69e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.03e-19 | 76 |
skeletal element | 2.08e-18 | 90 |
bone element | 4.44e-18 | 82 |
immune system | 1.00e-15 | 93 |
skeletal system | 3.63e-15 | 100 |
hematopoietic system | 4.34e-14 | 98 |
blood island | 4.34e-14 | 98 |
hemolymphoid system | 4.79e-13 | 108 |
musculoskeletal system | 2.96e-08 | 167 |