FFCP PHASE1:Hg19::chr4:2418461..2418476,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:2418461..2418476,+ | |||
|coexpression_cluster_id=C65 | |||
|description=CAGE_peak_at_chr4:2418461..2418476,+ | |description=CAGE_peak_at_chr4:2418461..2418476,+ | ||
|id=chr4:2418461..2418476,+ | |id=chr4:2418461..2418476,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.85e-33!42;CL:0000860!7.75e-30!45;CL:0000839!3.72e-26!70;CL:0000766!7.55e-26!76;CL:0000557!1.32e-25!71;CL:0002194!3.57e-25!63;CL:0000576!3.57e-25!63;CL:0000040!3.57e-25!63;CL:0000559!3.57e-25!63;CL:0002009!4.93e-24!65;CL:0002031!1.18e-17!124;CL:0002087!8.08e-17!119;CL:0000738!1.77e-16!140;CL:0000763!3.44e-16!112;CL:0000049!3.44e-16!112;CL:0000988!7.41e-14!182;CL:0002032!3.39e-13!165;CL:0000837!3.39e-13!165;CL:0000037!9.61e-13!172;CL:0000566!9.61e-13!172;CL:0000134!1.31e-10!358;CL:0002320!1.71e-10!365;CL:0000048!1.76e-10!430;CL:0000723!5.39e-10!436;CL:0000219!1.54e-09!390;CL:0000034!2.26e-09!444 | |ontology_enrichment_celltype=CL:0002057!8.85e-33!42;CL:0000860!7.75e-30!45;CL:0000839!3.72e-26!70;CL:0000766!7.55e-26!76;CL:0000557!1.32e-25!71;CL:0002194!3.57e-25!63;CL:0000576!3.57e-25!63;CL:0000040!3.57e-25!63;CL:0000559!3.57e-25!63;CL:0002009!4.93e-24!65;CL:0002031!1.18e-17!124;CL:0002087!8.08e-17!119;CL:0000738!1.77e-16!140;CL:0000763!3.44e-16!112;CL:0000049!3.44e-16!112;CL:0000988!7.41e-14!182;CL:0002032!3.39e-13!165;CL:0000837!3.39e-13!165;CL:0000037!9.61e-13!172;CL:0000566!9.61e-13!172;CL:0000134!1.31e-10!358;CL:0002320!1.71e-10!365;CL:0000048!1.76e-10!430;CL:0000723!5.39e-10!436;CL:0000219!1.54e-09!390;CL:0000034!2.26e-09!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.83e-97;33!CL:0002057;5.83e-97;33!CL:0000473;1.66e-78;39!CL:0000234;1.66e-78;39!CL:0000576;6.73e-46;48!CL:0000766;1.72e-28;69!CL:0000763;3.72e-14;100!CL:0002087;2.87e-11;104!CL:0000738;1.23e-08;136!CL:0000346;1.50e-08;3!CL:1000428;1.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.49e-83,48;CL:0000234,8.49e-83,48;CL:0000860,8.91e-82,42;CL:0002057,8.91e-82,42;CL:0002194,3.54e-65,59;CL:0000576,3.54e-65,59;CL:0000040,3.54e-65,59;CL:0000559,3.54e-65,59;CL:0002009,6.65e-63,61;CL:0000839,2.46e-62,66;CL:0000557,2.44e-61,67;CL:0000766,9.16e-57,72;CL:0000763,3.35e-36,108;CL:0000049,3.35e-36,108;CL:0002031,4.63e-32,120;CL:0002087,4.14e-31,115;CL:0000738,1.15e-27,136;CL:0002032,1.56e-22,161;CL:0000837,1.56e-22,161;CL:0000037,2.29e-21,168;CL:0000988,5.30e-20,177;CL:0000134,9.20e-10,354;CL:0002320,1.87e-09,361;CL:0000346,1.19e-08,3;CL:1000428,1.19e-08,3;CL:0000048,1.24e-08,427;CL:0000723,2.00e-08,433;CL:0000219,2.25e-08,386;CL:0000034,3.71e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.07e-64;42!CL:0000049;1.95e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.00e-25!102;UBERON:0003061!7.00e-25!102;UBERON:0002371!4.55e-24!80;UBERON:0002193!1.79e-23!112;UBERON:0001474!1.85e-21!86;UBERON:0004765!2.60e-18!101;UBERON:0001434!2.60e-18!101;UBERON:0002405!3.67e-17!115;UBERON:0003081!6.07e-14!216;UBERON:0002204!7.13e-14!167;UBERON:0002384!4.61e-10!375 | |ontology_enrichment_uberon=UBERON:0002390!7.00e-25!102;UBERON:0003061!7.00e-25!102;UBERON:0002371!4.55e-24!80;UBERON:0002193!1.79e-23!112;UBERON:0001474!1.85e-21!86;UBERON:0004765!2.60e-18!101;UBERON:0001434!2.60e-18!101;UBERON:0002405!3.67e-17!115;UBERON:0003081!6.07e-14!216;UBERON:0002204!7.13e-14!167;UBERON:0002384!4.61e-10!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.50e-08;3!UBERON:0001992;1.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-53,76;UBERON:0001474,2.88e-49,82;UBERON:0004765,1.88e-44,90;UBERON:0002390,1.17e-43,98;UBERON:0003061,1.17e-43,98;UBERON:0002405,7.38e-43,93;UBERON:0001434,1.66e-39,100;UBERON:0002193,3.87e-39,108;UBERON:0002204,2.96e-25,167;UBERON:0003081,1.95e-21,203;UBERON:0000926,5.84e-14,315;UBERON:0004120,5.84e-14,315;UBERON:0006603,5.84e-14,315;UBERON:0002384,4.89e-09,371;UBERON:0000412,1.19e-08,3;UBERON:0001992,1.19e-08,3 | |||
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|short_description=p@chr4:2418461..2418476,+ | |short_description=p@chr4:2418461..2418476,+ | ||
}} | }} |
Latest revision as of 04:28, 30 July 2015
Short description: | p@chr4:2418461..2418476, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:2418461..2418476, + |
Coexpression cluster: | C65_CD14_Eosinophils_Monocytederived_Basophils_immature_Macrophage_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.49e-83 | 48 |
phagocyte | 8.49e-83 | 48 |
classical monocyte | 8.91e-82 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.91e-82 | 42 |
monopoietic cell | 3.54e-65 | 59 |
monocyte | 3.54e-65 | 59 |
monoblast | 3.54e-65 | 59 |
promonocyte | 3.54e-65 | 59 |
macrophage dendritic cell progenitor | 6.65e-63 | 61 |
myeloid lineage restricted progenitor cell | 2.46e-62 | 66 |
granulocyte monocyte progenitor cell | 2.44e-61 | 67 |
myeloid leukocyte | 9.16e-57 | 72 |
myeloid cell | 3.35e-36 | 108 |
common myeloid progenitor | 3.35e-36 | 108 |
hematopoietic lineage restricted progenitor cell | 4.63e-32 | 120 |
nongranular leukocyte | 4.14e-31 | 115 |
leukocyte | 1.15e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.56e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.56e-22 | 161 |
hematopoietic stem cell | 2.29e-21 | 168 |
hematopoietic cell | 5.30e-20 | 177 |
mesenchymal cell | 9.20e-10 | 354 |
connective tissue cell | 1.87e-09 | 361 |
hair follicle dermal papilla cell | 1.19e-08 | 3 |
stem cell of epidermis | 1.19e-08 | 3 |
multi fate stem cell | 1.24e-08 | 427 |
somatic stem cell | 2.00e-08 | 433 |
motile cell | 2.25e-08 | 386 |
stem cell | 3.71e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-53 | 76 |
bone element | 2.88e-49 | 82 |
skeletal element | 1.88e-44 | 90 |
hematopoietic system | 1.17e-43 | 98 |
blood island | 1.17e-43 | 98 |
immune system | 7.38e-43 | 93 |
skeletal system | 1.66e-39 | 100 |
hemolymphoid system | 3.87e-39 | 108 |
musculoskeletal system | 2.96e-25 | 167 |
lateral plate mesoderm | 1.95e-21 | 203 |
mesoderm | 5.84e-14 | 315 |
mesoderm-derived structure | 5.84e-14 | 315 |
presumptive mesoderm | 5.84e-14 | 315 |
connective tissue | 4.89e-09 | 371 |
dermal papilla | 1.19e-08 | 3 |
papillary layer of dermis | 1.19e-08 | 3 |