FFCP PHASE1:Hg19::chr5:135399376..135399482,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:135399376..135399482,+
|short_description=p@chr5:135399376..135399482,+
|description=CAGE_peak_at_chr5:135399376..135399482,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:135399376..135399482,+ | |||
|coexpression_cluster_id=C295 | |||
|description=CAGE_peak_at_chr5:135399376..135399482,+ | |||
|id=chr5:135399376..135399482,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.95e-24!180;CL:0000680!2.68e-18!57;CL:0000056!2.68e-18!57;CL:0000355!2.68e-18!57;CL:0000187!2.02e-16!54;CL:0000183!4.68e-16!59;CL:0000393!1.07e-13!60;CL:0000211!1.07e-13!60;CL:0000192!5.72e-13!42;CL:0000514!5.72e-13!42;CL:0002371!6.76e-12!591;CL:0000048!2.61e-11!430;CL:0000057!3.41e-11!75;CL:0000723!7.79e-11!436;CL:0000359!2.38e-10!32;CL:0000144!7.67e-10!625;CL:0000034!1.19e-09!444;CL:0000548!1.70e-08!679;CL:0000004!1.70e-08!679;CL:0000255!1.70e-08!679;CL:0000012!3.03e-08!682;CL:0002194!1.19e-07!63;CL:0000576!1.19e-07!63;CL:0000040!1.19e-07!63;CL:0000559!1.19e-07!63;CL:0002334!1.58e-07!12;CL:0002009!2.35e-07!65;CL:0002539!8.72e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.43e-10;12!CL:0000359;1.20e-09;32!CL:0000192;2.58e-09;43!CL:0000187;9.83e-09;55!CL:0002620;3.45e-08;23!CL:0002539;5.69e-08;10!CL:0000860;9.49e-07;33!CL:0002057;9.49e-07;33!CL:0000393;9.76e-07;61!CL:0000211;9.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,8.52e-21,427;CL:0000723,1.81e-20,433;CL:0000034,3.15e-19,441;CL:0000680,3.90e-16,58;CL:0000056,3.90e-16,58;CL:0000355,3.90e-16,58;CL:0000187,8.49e-14,55;CL:0000057,1.01e-13,76;CL:0000192,3.01e-12,43;CL:0000514,3.01e-12,43;CL:0000393,2.60e-11,61;CL:0000211,2.60e-11,61;CL:0002334,1.58e-10,12;CL:0000359,4.17e-10,32;CL:0000134,1.01e-09,354;CL:0002320,1.32e-09,361;CL:0000219,3.91e-09,386;CL:0002620,3.42e-08,23;CL:0002539,4.05e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.58e-09;43!CL:0000355;5.21e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.94e-17!167;UBERON:0001134!1.09e-16!61;UBERON:0002036!1.09e-16!61;UBERON:0003082!1.09e-16!61;UBERON:0002385!8.70e-16!63;UBERON:0001015!8.70e-16!63;UBERON:0000383!8.70e-16!63;UBERON:0004290!1.28e-13!70;UBERON:0000486!1.36e-13!82;UBERON:0000926!2.75e-12!448;UBERON:0004120!2.75e-12!448;UBERON:0006603!2.75e-12!448;UBERON:0000914!1.71e-11!83;UBERON:0002329!1.71e-11!83;UBERON:0003077!1.71e-11!83;UBERON:0003059!1.71e-11!83;UBERON:0007282!1.71e-11!83;UBERON:0009618!1.71e-11!83;UBERON:0007285!1.71e-11!83;UBERON:0000468!1.76e-11!659;UBERON:0002100!1.53e-10!216;UBERON:0000467!2.97e-10!625;UBERON:0000490!3.00e-10!138;UBERON:0000480!4.44e-10!626;UBERON:0005256!9.36e-10!143;UBERON:0003081!1.68e-08!216;UBERON:0001637!1.92e-08!42;UBERON:0003509!1.92e-08!42;UBERON:0004572!1.92e-08!42;UBERON:0004573!2.63e-08!33;UBERON:0004571!2.63e-08!33;UBERON:0000475!1.58e-07!365;UBERON:0002050!1.85e-07!605;UBERON:0005423!1.85e-07!605;UBERON:0000923!2.25e-07!604;UBERON:0005291!2.25e-07!604;UBERON:0006598!2.25e-07!604;UBERON:0002532!2.25e-07!604;UBERON:0004872!2.27e-07!84;UBERON:0003104!5.46e-07!238;UBERON:0009142!5.46e-07!238;UBERON:0004237!8.72e-07!10;UBERON:0004695!8.72e-07!10;UBERON:0002111!8.72e-07!10;UBERON:0004178!8.72e-07!10;UBERON:0003914!9.66e-07!118;UBERON:0000922!9.92e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.95e-09;31!UBERON:0001015;5.95e-09;31!UBERON:0000383;5.95e-09;31!UBERON:0004573;2.04e-08;33!UBERON:0004571;2.04e-08;33!UBERON:0004237;5.69e-08;10!UBERON:0004695;5.69e-08;10!UBERON:0002111;5.69e-08;10!UBERON:0004178;5.69e-08;10!UBERON:0001135;1.92e-07;15!UBERON:0004457;2.88e-07;9!UBERON:0000042;2.88e-07;9!UBERON:0001637;5.70e-07;42!UBERON:0003509;5.70e-07;42!UBERON:0004572;5.70e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,7.49e-15,167;UBERON:0001134,3.00e-14,62;UBERON:0002036,3.00e-14,62;UBERON:0003082,3.00e-14,62;UBERON:0002385,2.10e-13,64;UBERON:0001015,2.10e-13,64;UBERON:0000383,2.10e-13,64;UBERON:0007524,5.55e-11,73;UBERON:0002329,7.17e-11,71;UBERON:0003059,7.17e-11,71;UBERON:0007282,7.17e-11,71;UBERON:0004290,7.17e-11,71;UBERON:0009618,7.17e-11,71;UBERON:0003077,1.48e-10,72;UBERON:0007285,1.48e-10,72;UBERON:0000926,1.52e-10,315;UBERON:0004120,1.52e-10,315;UBERON:0006603,1.52e-10,315;UBERON:0002384,2.69e-10,371;UBERON:0000486,7.57e-10,83;UBERON:0007503,1.87e-09,78;UBERON:0004573,2.64e-09,33;UBERON:0004571,2.64e-09,33;UBERON:0001637,3.51e-09,42;UBERON:0003509,3.51e-09,42;UBERON:0004572,3.51e-09,42;UBERON:0004237,4.05e-08,10;UBERON:0004695,4.05e-08,10;UBERON:0002111,4.05e-08,10;UBERON:0004178,4.05e-08,10;UBERON:0001135,1.40e-07,15;UBERON:0003081,4.87e-07,203;UBERON:0005256,7.26e-07,122 | |||
|phase1_expression=6.7221000330106,4.28201047781966,7.3296290129905,1.0007329835313,2.23480547213644,0,0,1.26343974685366,0,2.94880723801811,0.697801167972428,9.61142037372758,0.263766978228454,0.37129905888014,0,8.0679017574213,3.61616716814386,5.11217063271161,3.90346239032406,13.912679562677,1.22400414746552,0.940364164434263,2.28988789704845,1.64249310087461,0.125542639594803,0,0,0,0.393364276848904,0,0.309632246632152,0,0.6024118375565,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.647787332037959,0.257575567634187,3.05336301437086,1.88937971844405,6.0646015296954,2.78914844286822,1.23350366406548,1.23882548358041,3.45230870786581,1.0246428261164,1.41889337933151,1.03423704220986,0,0,1.69418105588344,2.72906150057846,2.24723484445085,0.918251677112708,0.962787081228281,3.19668562899521,4.28806690242731,2.99195486432448,5.54092175692502,0.580418477257168,0.56738522469114,1.24564449799115,3.51748131359441,4.17186334736161,0.868755378820466,1.21079900526674,1.47311054395026,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0.300353785683013,0.64290234678832,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.511450247374121,29.999449647919,7.01873074890245,5.5041677205113,7.15757352345989,4.37971383272372,1.32348744029695,4.43458794925128,1.84453049955565,0,0,0.741568885568859,4.54366351116557,7.48757870386849,1.72845348674525,0.476981248610684,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,1.20848795132744,0,0,0.367663080345869,0,0,0,0,0,0,0,0,0,0.436094052142534,12.424298792383,2.5326102332916,1.05927344650575,5.44989579422746,0.354668382198357,3.36406560085384,13.8773694448616,2.22000793575444,0.933633106199299,0.404132016209064,0.326923806226917,4.23800797405808,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0,0.323745888736263,0,0.204154171254893,0,0,0,0.741800787835671,0,1.43723628363248,0,0,0,1.31693286264251,0.612975591598039,1.05166641234618,1.13432183160021,19.3740806543971,11.9592137738398,9.96079935449941,12.6038260355449,1.54578793857658,9.79034052173391,13.4004136558745,24.4725681749836,5.16416127354353,10.0973509697646,11.1380377357182,1.13152239773168,27.6907482162959,3.72782763442269,4.74769658469365,1.93260853163297,0.545492241181669,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0,0,0,0.8231480226628,1.47008711385542,1.26755034821831,0.982827216677626,0.590789906681404,0,0,5.14703430895577,3.18275827685014,0,0,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0.821860859650752,0,0,0,0,0,1.47730203652438,0.936017060556951,0.743155811443641,0,1.51183915378974,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,4.26596662000667,0,10.143633030672,1.06375246633948,0,1.54324424557285,0,0.266422179016099,4.71827379071887,7.05408087008876,0.823240336780769,1.95441710576241,1.77695974371273,3.16780749173372,0,0,0.499864955910285,1.2162378064119,0.502257091432126,4.21667878966063,4.55287225434007,2.29723871668228,17.1164286048862,8.97644101338991,5.95881335396112,34.2006439788201,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.981531933753119,1.00034104211935,0.271265023699736,6.03115498439341,3.21172179834891,0.315404830067869,0.702848489956279,1.80567659836631,0,0,2.65690239414175,0.737476674166813,0.60818530127658,1.56640925970192,0.343143423810856,0,0,0.106727557803444,2.42502057157008,1.66435439510497,0.30239029332968,8.93188108147597,11.2027240500286,4.2099014164961,37.4166315826647,5.62877973973374,5.14732547659544,2.96836132889982,2.00472601943452,1.24293207719189,3.20295908453856,1.55776328755086,2.32420756919918,0.241718899183244,0.200506470303285,0,3.3296189967736,1.0925470080403,0.917870904715969,0,0.231046011313244,0,0,0.844413031143006,0,0,1.51141141271498,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0.984043937099117,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,3.21367859688319,0.870036464629098,2.15668063960502,2.14905144616581,0.827019434907183,3.11518710117994,0.435050081742686,1.36362603865761,1.86967274858148,1.32227932288782,0.192190067365106,1.53135254993501,0.10115778085555,0.929691098594572,17.9443037693465,3.485186350803,3.69640296211307,3.72614221221915,7.82939692867565,10.9341289271313,1.00187420719394,0.372158369359667,0.632758849437452,0,0.255897791311334,0.42793898803392,2.22742273548156,0,1.07923474549989,1.37268514868027,1.88499843753098,8.8960291892259,1.58510321173008,2.10629228119491,1.95053495635836,0.487426979262569,5.28250733783777,2.59349831675173,2.68670320712054,3.39024349860728,8.82184549673799,1.32687795048244,3.06915619677634,2.31510213706675,0.655894752046633,5.2756698010303,0.92947049429925,2.53526042279017,0.143411352204052,0.0982490410131212,0.7133421029625,1.06428319221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| ||
|short_description=p@chr5:135399376..135399482,+ | |||
}} | }} |
Latest revision as of 10:04, 30 July 2015
Short description: | p@chr5:135399376..135399482, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:135399376..135399482, + |
Coexpression cluster: | C295_Fibroblast_Smooth_Myoblast_Chondrocyte_hepatic_Synoviocyte_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 8.52e-21 | 427 |
somatic stem cell | 1.81e-20 | 433 |
stem cell | 3.15e-19 | 441 |
muscle precursor cell | 3.90e-16 | 58 |
myoblast | 3.90e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.90e-16 | 58 |
muscle cell | 8.49e-14 | 55 |
fibroblast | 1.01e-13 | 76 |
smooth muscle cell | 3.01e-12 | 43 |
smooth muscle myoblast | 3.01e-12 | 43 |
electrically responsive cell | 2.60e-11 | 61 |
electrically active cell | 2.60e-11 | 61 |
preadipocyte | 1.58e-10 | 12 |
vascular associated smooth muscle cell | 4.17e-10 | 32 |
mesenchymal cell | 1.01e-09 | 354 |
connective tissue cell | 1.32e-09 | 361 |
motile cell | 3.91e-09 | 386 |
skin fibroblast | 3.42e-08 | 23 |
aortic smooth muscle cell | 4.05e-08 | 10 |