FFCP PHASE1:Hg19::chr5:140984131..140984145,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:140984131..140984145,+ | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_at_chr5:140984131..140984145,+ | |description=CAGE_peak_at_chr5:140984131..140984145,+ | ||
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|ontology_enrichment_celltype=CL:0002057!1.63e-60!42;CL:0000860!1.21e-55!45;CL:0002194!3.48e-42!63;CL:0000576!3.48e-42!63;CL:0000040!3.48e-42!63;CL:0000559!3.48e-42!63;CL:0000766!1.72e-41!76;CL:0002009!1.64e-40!65;CL:0000839!9.33e-39!70;CL:0000557!4.92e-38!71;CL:0000738!3.37e-28!140;CL:0000763!5.96e-28!112;CL:0000049!5.96e-28!112;CL:0002087!5.98e-28!119;CL:0002031!7.14e-25!124;CL:0000037!3.53e-23!172;CL:0000566!3.53e-23!172;CL:0002032!1.65e-21!165;CL:0000837!1.65e-21!165;CL:0000988!5.08e-21!182;CL:0002393!2.17e-17!9;CL:0002397!2.17e-17!9;CL:0000134!2.33e-16!358;CL:0002320!1.20e-15!365;CL:0000219!2.14e-14!390;CL:0000048!6.93e-12!430;CL:0000723!1.95e-11!436;CL:0000034!7.36e-11!444;CL:0000767!9.06e-08!3;CL:0002371!1.57e-07!591;CL:0000063!2.57e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.63e-60!42;CL:0000860!1.21e-55!45;CL:0002194!3.48e-42!63;CL:0000576!3.48e-42!63;CL:0000040!3.48e-42!63;CL:0000559!3.48e-42!63;CL:0000766!1.72e-41!76;CL:0002009!1.64e-40!65;CL:0000839!9.33e-39!70;CL:0000557!4.92e-38!71;CL:0000738!3.37e-28!140;CL:0000763!5.96e-28!112;CL:0000049!5.96e-28!112;CL:0002087!5.98e-28!119;CL:0002031!7.14e-25!124;CL:0000037!3.53e-23!172;CL:0000566!3.53e-23!172;CL:0002032!1.65e-21!165;CL:0000837!1.65e-21!165;CL:0000988!5.08e-21!182;CL:0002393!2.17e-17!9;CL:0002397!2.17e-17!9;CL:0000134!2.33e-16!358;CL:0002320!1.20e-15!365;CL:0000219!2.14e-14!390;CL:0000048!6.93e-12!430;CL:0000723!1.95e-11!436;CL:0000034!7.36e-11!444;CL:0000767!9.06e-08!3;CL:0002371!1.57e-07!591;CL:0000063!2.57e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.30e-63;33!CL:0002057;6.30e-63;33!CL:0000576;3.29e-48;48!CL:0000473;1.23e-42;39!CL:0000234;1.23e-42;39!CL:0000766;4.14e-25;69!CL:0000767;2.01e-21;3!CL:0000763;7.70e-14;100!CL:0002393;8.86e-11;6!CL:0002397;8.86e-11;6!CL:0002087;2.66e-10;104!CL:0000094;2.37e-08;8 | |ontology_enrichment_celltype_v019=CL:0000860;6.30e-63;33!CL:0002057;6.30e-63;33!CL:0000576;3.29e-48;48!CL:0000473;1.23e-42;39!CL:0000234;1.23e-42;39!CL:0000766;4.14e-25;69!CL:0000767;2.01e-21;3!CL:0000763;7.70e-14;100!CL:0002393;8.86e-11;6!CL:0002397;8.86e-11;6!CL:0002087;2.66e-10;104!CL:0000094;2.37e-08;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.19e-72,42;CL:0002057,2.19e-72,42;CL:0000473,7.87e-63,48;CL:0000234,7.87e-63,48;CL:0000766,2.56e-57,72;CL:0002194,2.53e-54,59;CL:0000576,2.53e-54,59;CL:0000040,2.53e-54,59;CL:0000559,2.53e-54,59;CL:0002009,1.96e-52,61;CL:0000839,3.32e-48,66;CL:0000557,1.96e-47,67;CL:0000763,6.96e-37,108;CL:0000049,6.96e-37,108;CL:0000738,6.85e-31,136;CL:0002087,1.40e-28,115;CL:0002031,3.25e-27,120;CL:0002032,2.15e-25,161;CL:0000837,2.15e-25,161;CL:0000037,3.82e-24,168;CL:0000988,1.11e-22,177;CL:0000767,1.48e-21,3;CL:0000134,4.30e-12,354;CL:0002320,9.24e-12,361;CL:0000219,1.38e-10,386;CL:0000048,3.78e-09,427;CL:0000723,5.97e-09,433;CL:0000034,1.08e-08,441;CL:0000094,2.12e-08,8;CL:0002393,2.37e-07,9;CL:0002397,2.37e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.70e-49;42!CL:0000049;2.84e-12;108 | |ontology_enrichment_development_v019=CL:0002057;2.70e-49;42!CL:0000049;2.84e-12;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.16e-41,76;UBERON:0001474,4.34e-38,82;UBERON:0004765,2.31e-34,90;UBERON:0002405,3.97e-33,93;UBERON:0002390,3.09e-31,98;UBERON:0003061,3.09e-31,98;UBERON:0001434,1.56e-30,100;UBERON:0002193,5.67e-28,108;UBERON:0002204,1.31e-16,167;UBERON:0003081,6.79e-13,203;UBERON:0002384,2.63e-11,371;UBERON:0000926,9.61e-07,315;UBERON:0004120,9.61e-07,315;UBERON:0006603,9.61e-07,315 | |||
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| ||
|short_description=p@chr5:140984131..140984145,+ | |short_description=p@chr5:140984131..140984145,+ | ||
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Latest revision as of 10:43, 30 July 2015
Short description: | p@chr5:140984131..140984145, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:140984131..140984145, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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bone marrow | 2.16e-41 | 76 |
bone element | 4.34e-38 | 82 |
skeletal element | 2.31e-34 | 90 |
immune system | 3.97e-33 | 93 |
hematopoietic system | 3.09e-31 | 98 |
blood island | 3.09e-31 | 98 |
skeletal system | 1.56e-30 | 100 |
hemolymphoid system | 5.67e-28 | 108 |
musculoskeletal system | 1.31e-16 | 167 |
lateral plate mesoderm | 6.79e-13 | 203 |
connective tissue | 2.63e-11 | 371 |
mesoderm | 9.61e-07 | 315 |
mesoderm-derived structure | 9.61e-07 | 315 |
presumptive mesoderm | 9.61e-07 | 315 |