FFCP PHASE1:Hg19::chr5:83680603..83680617,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10085 | |EntrezGene=entrezgene:10085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3173 | |HGNC=HGNC:3173 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=O43854,Q8N610 | |UniProt=uniprot:O43854,uniprot:Q8N610 | ||
|association_with_transcript=0bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | |association_with_transcript=0bp_to_ENST00000296591,NM_005711,uc003kio.1,uc003kip.1_5end | ||
|cluster_id=chr5:83680603..83680617,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_2_at_EDIL3_5end | |description=CAGE_peak_2_at_EDIL3_5end |
Revision as of 16:58, 30 July 2015
Short description: | p2@EDIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EDIL3_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000296591, NM_005711, uc003kio.1, uc003kip.1_5end |
EntrezGene: | 10085 |
HGNC: | 3173 |
UniProt: | O43854Q8N610 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@EDIL3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 7.33e-11 | 32 |
electrically responsive cell | 7.95e-09 | 61 |
electrically active cell | 7.95e-09 | 61 |
smooth muscle cell | 1.42e-08 | 43 |
smooth muscle myoblast | 1.42e-08 | 43 |
muscle precursor cell | 2.11e-08 | 58 |
myoblast | 2.11e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.11e-08 | 58 |
muscle cell | 5.72e-08 | 55 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.57e-36 | 81 |
nervous system | 1.21e-34 | 89 |
brain | 9.11e-33 | 68 |
future brain | 9.11e-33 | 68 |
neural tube | 2.19e-29 | 56 |
neural rod | 2.19e-29 | 56 |
future spinal cord | 2.19e-29 | 56 |
neural keel | 2.19e-29 | 56 |
neural plate | 5.63e-28 | 82 |
presumptive neural plate | 5.63e-28 | 82 |
Showing 1 to 10 of 77 entries