FFCP PHASE1:Hg19::chr5:98105586..98105654,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:98105586..98105654,+ | |||
|coexpression_cluster_id=C952 | |||
|description=CAGE_peak_at_chr5:98105586..98105654,+ | |||
|id=chr5:98105586..98105654,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.84e-33!180;CL:0000057!4.64e-20!75;CL:0000680!9.89e-19!57;CL:0000056!9.89e-19!57;CL:0000355!9.89e-19!57;CL:0000183!3.57e-18!59;CL:0000192!6.85e-18!42;CL:0000514!6.85e-18!42;CL:0000187!1.93e-17!54;CL:0000359!5.28e-15!32;CL:0000393!1.36e-14!60;CL:0000211!1.36e-14!60;CL:0000222!1.43e-13!119;CL:0002620!2.01e-12!23;CL:0000220!2.71e-10!246;CL:0002321!3.82e-10!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.58e-16;32!CL:0000192;2.11e-15;43!CL:0002620;2.11e-14;23!CL:0000187;1.65e-10;55!CL:0000393;9.66e-09;61!CL:0000211;9.66e-09;61!CL:0000057;4.54e-08;73!CL:0000134;2.14e-07;55!CL:0002539;2.20e-07;10!CL:0000048;2.31e-07;58!CL:0000723;3.13e-07;61!CL:0002320;3.87e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.21e-21,43;CL:0000514,3.21e-21,43;CL:0000680,4.03e-21,58;CL:0000056,4.03e-21,58;CL:0000355,4.03e-21,58;CL:0000057,1.38e-20,76;CL:0000187,1.34e-19,55;CL:0000359,1.53e-17,32;CL:0000393,2.40e-16,61;CL:0000211,2.40e-16,61;CL:0002620,1.80e-14,23;CL:0000222,2.67e-13,121;CL:0002539,2.38e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;2.11e-15;43!CL:0000355;1.29e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.06e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.43e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!3.37e-24!83;UBERON:0002329!3.37e-24!83;UBERON:0003077!3.37e-24!83;UBERON:0003059!3.37e-24!83;UBERON:0007282!3.37e-24!83;UBERON:0009618!3.37e-24!83;UBERON:0007285!3.37e-24!83;UBERON:0000475!6.95e-24!365;UBERON:0004290!4.17e-21!70;UBERON:0000486!3.39e-19!82;UBERON:0002385!1.58e-17!63;UBERON:0001015!1.58e-17!63;UBERON:0000383!1.58e-17!63;UBERON:0001134!2.54e-17!61;UBERON:0002036!2.54e-17!61;UBERON:0003082!2.54e-17!61;UBERON:0000119!3.02e-16!312;UBERON:0001637!5.57e-16!42;UBERON:0003509!5.57e-16!42;UBERON:0004572!5.57e-16!42;UBERON:0000481!5.96e-16!347;UBERON:0000483!7.08e-16!309;UBERON:0001981!3.78e-14!60;UBERON:0007500!3.78e-14!60;UBERON:0004537!3.78e-14!60;UBERON:0006965!3.78e-14!60;UBERON:0004573!7.78e-14!33;UBERON:0004571!7.78e-14!33;UBERON:0005256!1.28e-13!143;UBERON:0002049!2.92e-13!79;UBERON:0007798!2.92e-13!79;UBERON:0000055!6.73e-13!69;UBERON:0003102!1.08e-12!95;UBERON:0002100!3.83e-12!216;UBERON:0002199!1.83e-11!45;UBERON:0002416!1.83e-11!45;UBERON:0004872!2.20e-11!84;UBERON:0002097!3.90e-11!40;UBERON:0000490!8.23e-11!138;UBERON:0000468!2.47e-10!659;UBERON:0004111!5.95e-10!241;UBERON:0000467!8.19e-10!625;UBERON:0000480!1.33e-09!626;UBERON:0000477!1.45e-09!286;UBERON:0000025!6.75e-09!194;UBERON:0003104!6.16e-08!238;UBERON:0009142!6.16e-08!238;UBERON:0000947!6.50e-08!21;UBERON:0010191!6.50e-08!21;UBERON:0004535!2.45e-07!110;UBERON:0001009!7.04e-07!113;UBERON:0001135!7.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;7.00e-14;33!UBERON:0004571;7.00e-14;33!UBERON:0001637;2.32e-12;42!UBERON:0003509;2.32e-12;42!UBERON:0004572;2.32e-12;42!UBERON:0007500;3.73e-09;56!UBERON:0001981;3.73e-09;56!UBERON:0004537;3.73e-09;56!UBERON:0002097;4.07e-09;41!UBERON:0000947;2.29e-08;21!UBERON:0010191;2.29e-08;21!UBERON:0002199;2.82e-08;46!UBERON:0002416;2.82e-08;46!UBERON:0003102;5.18e-08;50!UBERON:0001135;1.49e-07;15!UBERON:0004237;2.20e-07;10!UBERON:0004695;2.20e-07;10!UBERON:0002111;2.20e-07;10!UBERON:0004178;2.20e-07;10!UBERON:0002384;3.22e-07;198!UBERON:0002385;3.70e-07;31!UBERON:0001015;3.70e-07;31!UBERON:0000383;3.70e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.65e-24,73;UBERON:0003077,1.47e-23,72;UBERON:0007285,1.47e-23,72;UBERON:0002329,2.25e-23,71;UBERON:0003059,2.25e-23,71;UBERON:0007282,2.25e-23,71;UBERON:0004290,2.25e-23,71;UBERON:0009618,2.25e-23,71;UBERON:0007503,2.85e-20,78;UBERON:0000486,7.49e-20,83;UBERON:0002385,3.33e-19,64;UBERON:0001015,3.33e-19,64;UBERON:0000383,3.33e-19,64;UBERON:0001134,6.06e-19,62;UBERON:0002036,6.06e-19,62;UBERON:0003082,6.06e-19,62;UBERON:0001637,1.90e-17,42;UBERON:0003509,1.90e-17,42;UBERON:0004572,1.90e-17,42;UBERON:0004573,2.55e-15,33;UBERON:0004571,2.55e-15,33;UBERON:0000490,8.72e-14,148;UBERON:0007500,9.57e-14,59;UBERON:0001981,9.57e-14,59;UBERON:0004537,9.57e-14,59;UBERON:0006965,9.57e-14,59;UBERON:0002199,1.13e-12,46;UBERON:0002416,1.13e-12,46;UBERON:0002097,5.02e-12,41;UBERON:0000055,5.18e-12,68;UBERON:0002049,8.72e-12,78;UBERON:0007798,8.72e-12,78;UBERON:0003102,1.17e-11,99;UBERON:0005256,5.30e-11,122;UBERON:0000119,2.24e-10,309;UBERON:0003104,2.41e-10,160;UBERON:0009142,2.41e-10,160;UBERON:0000483,3.58e-10,306;UBERON:0004872,3.63e-10,83;UBERON:0000947,2.26e-08,21;UBERON:0010191,2.26e-08,21;UBERON:0001135,7.08e-08,15;UBERON:0004237,2.38e-07,10;UBERON:0004695,2.38e-07,10;UBERON:0002111,2.38e-07,10;UBERON:0004178,2.38e-07,10;UBERON:0010314,5.52e-07,132 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.845726424575827,0,0.893922188854576,0.872338524100369,0,1.26343974685366,2.35067065379855,0.982935746006035,0,0,0,2.47532705920093,2.65117900582333,3.36162573225888,4.82155622419182,7.30310090387373,3.41552959153355,1.72369481307503,2.24400760368678,4.07491137921514,0.286235987131057,0.410623275218653,0.753255837568817,0.0764134057479513,0,0,0,0,0,0,1.204823675113,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.255725123687061,4.69870898099936,7.01873074890245,1.01392563272577,0.795285947051099,1.45990461090791,1.22895262313288,0.443458794925128,0.351339142772504,0.916853528483988,1.09288586487763,0.370784442784429,0,0,0,0,0,0,2.58391129576717,0.860234595106124,4.51282652089873,4.52246353539208,2.51699661725944,0.550236083880135,1.67195973229448,0.258416759169329,2.13459757612026,0.66944122552934,2.41697590265488,2.28081631715554,0.488124115096339,1.47065232138347,2.43042584364528,0.535798369704479,0,0.225222960966644,1.53316637465883,5.69559395740877,2.38162267109529,0,0,0.872188104285069,9.44246708221105,3.16576279161449,24.7605168120719,5.73673241497627,1.41867352879343,1.12135520028461,1.06748995729705,0.98667019366864,0.933633106199299,2.82892411346345,0.653847612453835,0.756787138224657,0,9.60717870518566,2.80944069147288,3.99330275081114,5.67904986096844,3.52303495931295,3.88495066483516,3.08991774744947,6.32877930890169,3.0708579327942,5.6829179646671,10.6920257155385,9.64341024186372,4.55080680969013,17.965453545406,3.19838616512726,3.62843707628696,7.20366700258876,7.02364193409341,12.2595118319608,10.9673783001816,1.13432183160021,13.6336123123535,14.308345050844,8.68920794754204,17.7053746689797,11.1296731577514,12.1091053821446,10.0503102419058,9.95780360223471,2.53336213419116,12.6216887122057,12.9790357085642,9.37547129549109,15.620422070731,9.16844093871526,8.98671139245584,0.57978255948989,1.36373060295417,0.860413786167011,0.365921118388786,0.265059536642971,0.464775771478074,0.829288440122964,0.252320850875628,0,28.1609158193669,14.7945415784364,9.66944449467364,6.03678306441573,6.49691533502627,0,0,0,0,0,0,0,0,0,0,9.81692416624121,0,0,0,0,0,0,0.245976877086227,1.20097467208968,0.548751427043128,1.1240175325762,0.201057944823262,0.370353780634118,4.56131627434455,2.07986957055916,1.44331342025273,3.59384255422738,1.05667824812239,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,1.17587489739202,1.13420077793909,0.447792613514241,0.871901815541886,0,0.492663237895943,0,0,0.144119953416961,0.12624243342638,0.571481048629521,4.96584953225761,7.03304683260282,0,0.411309970813294,0,3.14409075893636,5.04589879554123,0.43596006883328,1.466765716419,7.23921608243556,7.15312891703765,5.071816515336,12.233153362904,6.24044621468197,0.257207374262142,1.41849132023278,1.8649552531127,0.857867961948885,2.17048642156577,0,5.86325131728723,1.06617584622764,0,1.20575750823834,0.871533458600294,0.399891964728228,0,0,0,7.18874566474748,5.7430967917057,1.42636905040718,13.75422413342,2.05476322550383,7.87868238255541,0,0,0,0.128343036279748,1.01637849688985,1.30139853857622,1.54657762555539,0.167516265334349,0,0,0,0,0.858840442033979,3.00102312635806,9.22301080579101,4.36738809214695,9.45673640624957,8.35822799679854,10.8941515943223,2.70851489754947,2.27407504055985,2.0694614258501,1.32845119707087,2.76553752812555,8.25394337446787,11.9438706052272,3.43143423810856,0,0.215714200818617,0,0,0,0.30239029332968,3.47350930946288,1.53461973288062,1.12264037773229,3.45975702990393,0.511707249066704,0.965123526861645,0,10.0236300971726,4.43904313282818,7.06293541718759,6.75030757938707,4.64841513839837,0,0.802025881213139,0.736647911487171,6.42960909721798,15.1135669445575,5.37610101333639,0.902399225814824,0.385076685522074,1.56869953835371,1.46139224653261,0.949964660035881,0,0.680374821106063,0,0,1.08378575017541,2.00675909541941,0.509752546090077,0,0.895499018888713,0,0,0.512900250232778,0.328014645699706,0.650756789328606,0,0.183138929636687,0.247528499761764,1.14853107599234,0.650060246036521,6.42735719376638,5.89691381581944,0.924291702687866,0.767518373630648,4.41077031950498,1.18162269355101,1.0151168573996,2.55679882248303,5.34192213880424,0.991709492165869,0.960950336825531,0.510450849978337,0.708104465988849,6.04299214086472,15.4258049947014,11.1525963225696,6.16067160352178,10.1138145760234,24.358123778102,9.266210955196,5.29562080945368,1.48863347743867,1.2655176988749,2.66882271493355,6.14154699147201,2.56763392820352,11.1371136774078,7.8494864019923,1.79872457583315,2.19629623788844,2.94531005864216,6.87420437349274,3.17020642346017,6.31887684358472,4.8763373908959,10.7233935437765,13.7345190783782,5.05049672209547,5.79762271010222,2.26016233240486,6.61638412255349,5.30751180192976,12.2766247871054,3.4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| |||
|short_description=p@chr5:98105586..98105654,+ | |||
}} |
Latest revision as of 17:38, 30 July 2015
Short description: | p@chr5:98105586..98105654, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:98105586..98105654, + |
Coexpression cluster: | C952_basal_Fibroblast_tenocyte_Hair_Smooth_Preadipocyte_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.21e-21 | 43 |
smooth muscle myoblast | 3.21e-21 | 43 |
muscle precursor cell | 4.03e-21 | 58 |
myoblast | 4.03e-21 | 58 |
multi-potent skeletal muscle stem cell | 4.03e-21 | 58 |
fibroblast | 1.38e-20 | 76 |
muscle cell | 1.34e-19 | 55 |
vascular associated smooth muscle cell | 1.53e-17 | 32 |
electrically responsive cell | 2.40e-16 | 61 |
electrically active cell | 2.40e-16 | 61 |
skin fibroblast | 1.80e-14 | 23 |
mesodermal cell | 2.67e-13 | 121 |
aortic smooth muscle cell | 2.38e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.43e-07 | 14 |