FFCP PHASE1:Hg19::chr6:152957491..152957514,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:152957491..152957514,- | |||
|coexpression_cluster_id=C4575 | |coexpression_cluster_id=C4575 | ||
|description=CAGE_peak_at_chr6:152957491..152957514,- | |description=CAGE_peak_at_chr6:152957491..152957514,- | ||
|id=chr6:152957491..152957514,- | |id=chr6:152957491..152957514,- | ||
|ontology_enrichment_celltype=CL:0000625!7.06e-18!11;CL:0000791!3.59e-13!18;CL:0000789!3.59e-13!18;CL:0002420!3.59e-13!18;CL:0002419!3.59e-13!18;CL:0000790!3.59e-13!18;CL:0000094!6.41e-10!8;CL:0000084!1.02e-09!25;CL:0000827!1.02e-09!25;CL:0000081!8.53e-07!11 | |ontology_enrichment_celltype=CL:0000625!7.06e-18!11;CL:0000791!3.59e-13!18;CL:0000789!3.59e-13!18;CL:0002420!3.59e-13!18;CL:0002419!3.59e-13!18;CL:0000790!3.59e-13!18;CL:0000094!6.41e-10!8;CL:0000084!1.02e-09!25;CL:0000827!1.02e-09!25;CL:0000081!8.53e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.38e-34;11!CL:0000791;1.60e-20;18!CL:0000789;1.60e-20;18!CL:0002419;1.60e-20;18!CL:0000623;2.14e-16;3!CL:0000775;2.05e-15;3!CL:0000094;2.13e-15;8!CL:0000084;2.49e-14;25!CL:0000081;3.99e-11;11!CL:0000226;1.33e-07;3!CL:0000842;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.78e-35,11;CL:0000791,1.30e-20,18;CL:0000789,1.30e-20,18;CL:0002420,1.30e-20,18;CL:0002419,1.30e-20,18;CL:0000790,1.30e-20,18;CL:0000623,2.20e-16,3;CL:0000825,2.20e-16,3;CL:0000775,1.03e-15,3;CL:0000094,1.32e-15,8;CL:0000084,2.16e-14,25;CL:0000827,2.16e-14,25;CL:0000838,2.59e-11,52;CL:0000081,2.84e-11,11;CL:0000738,4.36e-11,136;CL:0000542,4.72e-11,53;CL:0000051,4.72e-11,53;CL:0000037,4.14e-08,168;CL:0000226,1.49e-07,3;CL:0000842,1.49e-07,3;CL:0000988,1.80e-07,177;CL:0002087,2.52e-07,115;CL:0002032,9.87e-07,161;CL:0000837,9.87e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;1.60e-20;18!UBERON:0006215;4.00e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.59e-43!115;UBERON:0001049!1.72e-28!57;UBERON:0005068!1.72e-28!57;UBERON:0006241!1.72e-28!57;UBERON:0007135!1.72e-28!57;UBERON:0002616!5.23e-24!59;UBERON:0002780!1.13e-22!41;UBERON:0001890!1.13e-22!41;UBERON:0006240!1.13e-22!41;UBERON:0001869!2.38e-22!32;UBERON:0002020!5.53e-22!34;UBERON:0003528!5.53e-22!34;UBERON:0003080!6.30e-22!42;UBERON:0002619!9.28e-22!22;UBERON:0000955!2.93e-21!69;UBERON:0006238!2.93e-21!69;UBERON:0001893!1.32e-20!34;UBERON:0001017!2.17e-20!82;UBERON:0005743!5.97e-20!86;UBERON:0002791!2.19e-19!33;UBERON:0001950!2.45e-19!20;UBERON:0003075!7.80e-19!86;UBERON:0007284!7.80e-19!86;UBERON:0000956!1.65e-18!25;UBERON:0000203!1.65e-18!25;UBERON:0002346!2.06e-18!90;UBERON:0000073!8.47e-18!94;UBERON:0001016!8.47e-18!94;UBERON:0003056!1.79e-14!61;UBERON:0000153!2.07e-11!129;UBERON:0007811!2.07e-11!129;UBERON:0000033!4.16e-11!123;UBERON:0000178!9.13e-10!15;UBERON:0000179!9.13e-10!15;UBERON:0000463!9.13e-10!15;UBERON:0000200!6.54e-09!6;UBERON:0000924!7.63e-08!173;UBERON:0006601!7.63e-08!173;UBERON:0000349!7.74e-08!5;UBERON:0004121!7.76e-08!169;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15;UBERON:0002021!1.18e-07!5 | |ontology_enrichment_uberon=UBERON:0007023!3.59e-43!115;UBERON:0001049!1.72e-28!57;UBERON:0005068!1.72e-28!57;UBERON:0006241!1.72e-28!57;UBERON:0007135!1.72e-28!57;UBERON:0002616!5.23e-24!59;UBERON:0002780!1.13e-22!41;UBERON:0001890!1.13e-22!41;UBERON:0006240!1.13e-22!41;UBERON:0001869!2.38e-22!32;UBERON:0002020!5.53e-22!34;UBERON:0003528!5.53e-22!34;UBERON:0003080!6.30e-22!42;UBERON:0002619!9.28e-22!22;UBERON:0000955!2.93e-21!69;UBERON:0006238!2.93e-21!69;UBERON:0001893!1.32e-20!34;UBERON:0001017!2.17e-20!82;UBERON:0005743!5.97e-20!86;UBERON:0002791!2.19e-19!33;UBERON:0001950!2.45e-19!20;UBERON:0003075!7.80e-19!86;UBERON:0007284!7.80e-19!86;UBERON:0000956!1.65e-18!25;UBERON:0000203!1.65e-18!25;UBERON:0002346!2.06e-18!90;UBERON:0000073!8.47e-18!94;UBERON:0001016!8.47e-18!94;UBERON:0003056!1.79e-14!61;UBERON:0000153!2.07e-11!129;UBERON:0007811!2.07e-11!129;UBERON:0000033!4.16e-11!123;UBERON:0000178!9.13e-10!15;UBERON:0000179!9.13e-10!15;UBERON:0000463!9.13e-10!15;UBERON:0000200!6.54e-09!6;UBERON:0000924!7.63e-08!173;UBERON:0006601!7.63e-08!173;UBERON:0000349!7.74e-08!5;UBERON:0004121!7.76e-08!169;UBERON:0003076!1.02e-07!15;UBERON:0003057!1.02e-07!15;UBERON:0002021!1.18e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.16e-25;15!UBERON:0000179;9.16e-25;15!UBERON:0000463;9.16e-25;15!UBERON:0000007;7.71e-11;2!UBERON:0002390;2.22e-10;32!UBERON:0000200;1.63e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.31e-24,15;UBERON:0000179,1.31e-24,15;UBERON:0000463,1.31e-24,15;UBERON:0000007,4.49e-11,2;UBERON:0000200,2.49e-07,6;UBERON:0007023,3.51e-07,114;UBERON:0000073,6.70e-07,53;UBERON:0002616,6.70e-07,53 | |||
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|short_description=p@chr6:152957491..152957514,- | |short_description=p@chr6:152957491..152957514,- | ||
}} | }} |
Latest revision as of 21:06, 30 July 2015
Short description: | p@chr6:152957491..152957514, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:152957491..152957514, - |
Coexpression cluster: | C4575_Neutrophils_cerebellum_Natural_CD8_Basophils_pituitary_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.78e-35 | 11 |
mature alpha-beta T cell | 1.30e-20 | 18 |
alpha-beta T cell | 1.30e-20 | 18 |
immature T cell | 1.30e-20 | 18 |
mature T cell | 1.30e-20 | 18 |
immature alpha-beta T cell | 1.30e-20 | 18 |
natural killer cell | 2.20e-16 | 3 |
pro-NK cell | 2.20e-16 | 3 |
neutrophil | 1.03e-15 | 3 |
granulocyte | 1.32e-15 | 8 |
T cell | 2.16e-14 | 25 |
pro-T cell | 2.16e-14 | 25 |
lymphoid lineage restricted progenitor cell | 2.59e-11 | 52 |
blood cell | 2.84e-11 | 11 |
leukocyte | 4.36e-11 | 136 |
lymphocyte | 4.72e-11 | 53 |
common lymphoid progenitor | 4.72e-11 | 53 |
hematopoietic stem cell | 4.14e-08 | 168 |
single nucleate cell | 1.49e-07 | 3 |
mononuclear cell | 1.49e-07 | 3 |
hematopoietic cell | 1.80e-07 | 177 |
nongranular leukocyte | 2.52e-07 | 115 |
hematopoietic oligopotent progenitor cell | 9.87e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.87e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
blood | 1.31e-24 | 15 |
haemolymphatic fluid | 1.31e-24 | 15 |
organism substance | 1.31e-24 | 15 |
pituitary gland | 4.49e-11 | 2 |
gyrus | 2.49e-07 | 6 |
adult organism | 3.51e-07 | 114 |
regional part of nervous system | 6.70e-07 | 53 |
regional part of brain | 6.70e-07 | 53 |