FFCP PHASE1:Hg19::chr6:160411448..160411452,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:160411448..160411452,+ | |||
|coexpression_cluster_id=C866 | |||
|description=CAGE_peak_at_chr6:160411448..160411452,+ | |description=CAGE_peak_at_chr6:160411448..160411452,+ | ||
|id=chr6:160411448..160411452,+ | |id=chr6:160411448..160411452,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.03e-57!42;CL:0002009!1.31e-54!65;CL:0002194!2.82e-54!63;CL:0000576!2.82e-54!63;CL:0000040!2.82e-54!63;CL:0000559!2.82e-54!63;CL:0000766!3.77e-54!76;CL:0000557!1.37e-53!71;CL:0000763!1.47e-52!112;CL:0000049!1.47e-52!112;CL:0000860!2.44e-52!45;CL:0000839!3.20e-52!70;CL:0000988!4.58e-48!182;CL:0000738!2.54e-47!140;CL:0000037!1.38e-46!172;CL:0000566!1.38e-46!172;CL:0002032!3.08e-46!165;CL:0000837!3.08e-46!165;CL:0002031!1.92e-41!124;CL:0002087!2.09e-40!119;CL:0000134!1.13e-19!358;CL:0002320!7.07e-19!365;CL:0000219!1.71e-17!390;CL:0000048!2.40e-15!430;CL:0000723!7.93e-15!436;CL:0000034!3.70e-14!444;CL:0002371!1.44e-08!591;CL:0000144!2.52e-08!625;CL:0000063!3.82e-07!578;CL:0000451!4.63e-07!10 | |ontology_enrichment_celltype=CL:0002057!6.03e-57!42;CL:0002009!1.31e-54!65;CL:0002194!2.82e-54!63;CL:0000576!2.82e-54!63;CL:0000040!2.82e-54!63;CL:0000559!2.82e-54!63;CL:0000766!3.77e-54!76;CL:0000557!1.37e-53!71;CL:0000763!1.47e-52!112;CL:0000049!1.47e-52!112;CL:0000860!2.44e-52!45;CL:0000839!3.20e-52!70;CL:0000988!4.58e-48!182;CL:0000738!2.54e-47!140;CL:0000037!1.38e-46!172;CL:0000566!1.38e-46!172;CL:0002032!3.08e-46!165;CL:0000837!3.08e-46!165;CL:0002031!1.92e-41!124;CL:0002087!2.09e-40!119;CL:0000134!1.13e-19!358;CL:0002320!7.07e-19!365;CL:0000219!1.71e-17!390;CL:0000048!2.40e-15!430;CL:0000723!7.93e-15!436;CL:0000034!3.70e-14!444;CL:0002371!1.44e-08!591;CL:0000144!2.52e-08!625;CL:0000063!3.82e-07!578;CL:0000451!4.63e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.40e-89;33!CL:0002057;7.40e-89;33!CL:0000473;1.87e-66;39!CL:0000234;1.87e-66;39!CL:0000576;7.52e-49;48!CL:0000766;6.14e-33;69!CL:0002087;5.86e-17;104!CL:0000763;1.69e-15;100!CL:0000738;1.07e-10;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-88,42;CL:0002057,1.03e-88,42;CL:0000473,1.26e-82,48;CL:0000234,1.26e-82,48;CL:0002194,7.23e-65,59;CL:0000576,7.23e-65,59;CL:0000040,7.23e-65,59;CL:0000559,7.23e-65,59;CL:0002009,1.42e-62,61;CL:0000839,1.92e-57,66;CL:0000557,1.66e-56,67;CL:0000766,4.48e-56,72;CL:0002087,6.25e-41,115;CL:0002031,5.82e-39,120;CL:0000738,2.40e-38,136;CL:0000763,4.18e-38,108;CL:0000049,4.18e-38,108;CL:0000988,2.48e-36,177;CL:0000037,8.60e-32,168;CL:0002032,2.18e-31,161;CL:0000837,2.18e-31,161;CL:0000134,2.43e-12,354;CL:0002320,5.84e-12,361;CL:0000219,1.28e-10,386;CL:0000048,5.64e-09,427;CL:0000723,9.52e-09,433;CL:0000034,1.87e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.37e-68;42!CL:0000049;1.56e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.13e-46!80;UBERON:0002390!1.03e-45!102;UBERON:0003061!1.03e-45!102;UBERON:0001474!1.56e-43!86;UBERON:0002193!9.40e-42!112;UBERON:0004765!6.78e-35!101;UBERON:0001434!6.78e-35!101;UBERON:0002405!1.25e-34!115;UBERON:0002204!2.91e-19!167;UBERON:0003081!5.78e-19!216;UBERON:0002384!8.61e-18!375 | |ontology_enrichment_uberon=UBERON:0002371!6.13e-46!80;UBERON:0002390!1.03e-45!102;UBERON:0003061!1.03e-45!102;UBERON:0001474!1.56e-43!86;UBERON:0002193!9.40e-42!112;UBERON:0004765!6.78e-35!101;UBERON:0001434!6.78e-35!101;UBERON:0002405!1.25e-34!115;UBERON:0002204!2.91e-19!167;UBERON:0003081!5.78e-19!216;UBERON:0002384!8.61e-18!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.55e-49,76;UBERON:0002390,3.57e-46,98;UBERON:0003061,3.57e-46,98;UBERON:0001474,3.59e-45,82;UBERON:0002193,2.49e-41,108;UBERON:0004765,1.19e-40,90;UBERON:0002405,3.72e-39,93;UBERON:0001434,5.22e-36,100;UBERON:0002204,3.79e-19,167;UBERON:0003081,5.72e-19,203;UBERON:0002384,1.93e-11,371;UBERON:0000926,7.40e-10,315;UBERON:0004120,7.40e-10,315;UBERON:0006603,7.40e-10,315 | |||
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| ||
|short_description=p@chr6:160411448..160411452,+ | |short_description=p@chr6:160411448..160411452,+ | ||
}} | }} |
Latest revision as of 21:45, 30 July 2015
Short description: | p@chr6:160411448..160411452, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:160411448..160411452, + |
Coexpression cluster: | C866_hairy_CD14_mycosis_cord_Eosinophils_CD14CD16_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-88 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-88 | 42 |
defensive cell | 1.26e-82 | 48 |
phagocyte | 1.26e-82 | 48 |
monopoietic cell | 7.23e-65 | 59 |
monocyte | 7.23e-65 | 59 |
monoblast | 7.23e-65 | 59 |
promonocyte | 7.23e-65 | 59 |
macrophage dendritic cell progenitor | 1.42e-62 | 61 |
myeloid lineage restricted progenitor cell | 1.92e-57 | 66 |
granulocyte monocyte progenitor cell | 1.66e-56 | 67 |
myeloid leukocyte | 4.48e-56 | 72 |
nongranular leukocyte | 6.25e-41 | 115 |
hematopoietic lineage restricted progenitor cell | 5.82e-39 | 120 |
leukocyte | 2.40e-38 | 136 |
myeloid cell | 4.18e-38 | 108 |
common myeloid progenitor | 4.18e-38 | 108 |
hematopoietic cell | 2.48e-36 | 177 |
hematopoietic stem cell | 8.60e-32 | 168 |
hematopoietic oligopotent progenitor cell | 2.18e-31 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-31 | 161 |
mesenchymal cell | 2.43e-12 | 354 |
connective tissue cell | 5.84e-12 | 361 |
motile cell | 1.28e-10 | 386 |
multi fate stem cell | 5.64e-09 | 427 |
somatic stem cell | 9.52e-09 | 433 |
stem cell | 1.87e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.55e-49 | 76 |
hematopoietic system | 3.57e-46 | 98 |
blood island | 3.57e-46 | 98 |
bone element | 3.59e-45 | 82 |
hemolymphoid system | 2.49e-41 | 108 |
skeletal element | 1.19e-40 | 90 |
immune system | 3.72e-39 | 93 |
skeletal system | 5.22e-36 | 100 |
musculoskeletal system | 3.79e-19 | 167 |
lateral plate mesoderm | 5.72e-19 | 203 |
connective tissue | 1.93e-11 | 371 |
mesoderm | 7.40e-10 | 315 |
mesoderm-derived structure | 7.40e-10 | 315 |
presumptive mesoderm | 7.40e-10 | 315 |