FFCP PHASE1:Hg19::chr6:22113505..22113525,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:22113505..22113525,+ | |||
|description=CAGE_peak_at_chr6:22113505..22113525,+ | |||
|id=chr6:22113505..22113525,+ | |||
|ontology_enrichment_celltype=CL:0002139!8.27e-20!24;CL:0000071!4.98e-17!18;CL:0002546!4.98e-17!18;CL:0000115!4.40e-13!35;CL:0000213!1.66e-11!57;CL:0000215!1.66e-11!57;CL:0000066!5.32e-11!254;CL:0000220!4.39e-10!246;CL:0002321!7.42e-10!248;CL:0002078!4.11e-09!44;CL:0000222!3.36e-08!119;CL:1000413!5.62e-08!9;CL:0000076!1.41e-07!62;CL:0002544!6.56e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.83e-38;24!CL:0000071;2.70e-30;18!CL:0000115;1.17e-23;36!CL:0000213;6.66e-20;58!CL:0000215;6.66e-20;58!CL:0002144;1.34e-18;3!CL:0002544;1.88e-15;6!CL:0002078;6.67e-14;45!CL:0002545;1.28e-12;2!CL:1000413;2.37e-10;9!CL:0002138;3.50e-09;6!CL:0002543;3.86e-09;6!CL:0000076;7.49e-09;63!CL:0000167;1.50e-07;1!CL:0000164;1.50e-07;1!CL:0000502;1.50e-07;1!CL:0000172;1.50e-07;1!CL:0000173;1.50e-07;1!CL:0000222;6.12e-07;1!CL:0000319;6.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.91e-38,24;CL:0000071,2.05e-30,18;CL:0002546,2.05e-30,18;CL:0000115,1.98e-28,36;CL:0000213,3.32e-28,58;CL:0000215,3.32e-28,58;CL:0002078,3.65e-22,45;CL:0002144,1.23e-18,3;CL:0000222,2.46e-16,121;CL:0002544,1.45e-15,6;CL:0000076,4.93e-15,63;CL:0002545,8.49e-13,2;CL:1000413,2.00e-10,9;CL:0000066,3.80e-10,253;CL:0005020,3.31e-09,6;CL:0002138,3.31e-09,6;CL:0005022,3.31e-09,6;CL:0002543,3.81e-09,6;CL:0002321,4.41e-09,250;CL:0000167,1.55e-07,1;CL:0000164,1.55e-07,1;CL:0000502,1.55e-07,1;CL:0000172,1.55e-07,1;CL:0000173,1.55e-07,1;CL:0002351,1.55e-07,1;CL:0000319,4.85e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002546;2.70e-30;18!CL:0005022;3.50e-09;6!CL:0000222;4.93e-08;121!CL:0002351;1.50e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.50e-07;1!DOID:0050619;1.80e-07;1!DOID:1357;1.80e-07;1!DOID:5662;2.03e-07;1!DOID:3030;6.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.55e-07,1;DOID:0050619,1.86e-07,1;DOID:1357,1.86e-07,1;DOID:5662,1.98e-07,1;DOID:3030,4.85e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000487!6.68e-19!22;UBERON:0001986!4.98e-17!18;UBERON:0004638!4.98e-17!18;UBERON:0004852!4.98e-17!18;UBERON:0003914!5.82e-17!118;UBERON:0002049!9.66e-17!79;UBERON:0007798!9.66e-17!79;UBERON:0000055!2.09e-16!69;UBERON:0006914!6.76e-16!25;UBERON:0004535!1.18e-15!110;UBERON:0001009!7.34e-15!113;UBERON:0001981!7.56e-15!60;UBERON:0007500!7.56e-15!60;UBERON:0004537!7.56e-15!60;UBERON:0006965!7.56e-15!60;UBERON:0004872!8.70e-14!84;UBERON:0000477!4.72e-13!286;UBERON:0004111!1.68e-11!241;UBERON:0000490!2.21e-11!138;UBERON:0000025!7.79e-10!194;UBERON:0001637!1.88e-08!42;UBERON:0003509!1.88e-08!42;UBERON:0004572!1.88e-08!42;UBERON:0004573!2.33e-08!33;UBERON:0004571!2.33e-08!33;UBERON:0003915!5.62e-08!9;UBERON:0004700!5.62e-08!9;UBERON:0001917!5.62e-08!9;UBERON:0000947!2.03e-07!21;UBERON:0010191!2.03e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.70e-30;18!UBERON:0001986;2.70e-30;18!UBERON:0004852;2.70e-30;18!UBERON:0000487;1.83e-24;22!UBERON:0006914;2.58e-21;25!UBERON:0010523;1.34e-18;3!UBERON:0001915;1.34e-18;3!UBERON:0001982;1.34e-18;3!UBERON:0000490;4.03e-17;33!UBERON:0005800;1.28e-12;2!UBERON:0001515;1.28e-12;2!UBERON:0007500;6.66e-11;56!UBERON:0001981;6.66e-11;56!UBERON:0004537;6.66e-11;56!UBERON:0000055;8.86e-11;65!UBERON:0003915;2.37e-10;9!UBERON:0004700;2.37e-10;9!UBERON:0001917;2.37e-10;9!UBERON:0001280;9.62e-09;3!UBERON:0004647;9.62e-09;3!UBERON:0003914;1.54e-08;74!UBERON:0001764;1.80e-07;1!UBERON:0001825;1.80e-07;1!UBERON:0001282;2.03e-07;1!UBERON:0009842;2.03e-07;1!UBERON:0003704;2.03e-07;1!UBERON:0001171;2.03e-07;1!UBERON:0001172;2.03e-07;1!UBERON:0001473;5.38e-07;8!UBERON:0004536;5.38e-07;8!UBERON:0006558;5.38e-07;8!UBERON:0002049;5.92e-07;75!UBERON:0007798;5.92e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.05e-30,18;UBERON:0001986,2.05e-30,18;UBERON:0004852,2.05e-30,18;UBERON:0000487,1.46e-24,22;UBERON:0006914,2.12e-21,25;UBERON:0010523,1.23e-18,3;UBERON:0001915,1.23e-18,3;UBERON:0001982,1.23e-18,3;UBERON:0000055,3.63e-18,68;UBERON:0002049,2.09e-15,78;UBERON:0007798,2.09e-15,78;UBERON:0007500,8.72e-14,59;UBERON:0001981,8.72e-14,59;UBERON:0004537,8.72e-14,59;UBERON:0006965,8.72e-14,59;UBERON:0005800,8.49e-13,2;UBERON:0001515,8.49e-13,2;UBERON:0004535,1.62e-11,109;UBERON:0001009,4.11e-11,112;UBERON:0004872,1.37e-10,83;UBERON:0003915,2.00e-10,9;UBERON:0004700,2.00e-10,9;UBERON:0001917,2.00e-10,9;UBERON:0003914,3.38e-09,117;UBERON:0001280,1.15e-08,3;UBERON:0004647,1.15e-08,3;UBERON:0005171,1.15e-08,3;UBERON:0001764,1.86e-07,1;UBERON:0001825,1.86e-07,1;UBERON:0001282,2.10e-07,1;UBERON:0009842,2.10e-07,1;UBERON:0003704,2.10e-07,1;UBERON:0001171,2.10e-07,1;UBERON:0001172,2.10e-07,1;UBERON:0001473,5.17e-07,8;UBERON:0004536,5.17e-07,8;UBERON:0006558,5.17e-07,8;UBERON:0004111,6.16e-07,240;UBERON:0000025,9.27e-07,192 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,1.46062018077475,0.975865597581014,0,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0,0.087834785693126,0,0,0,0,0,0,0,0,0,1.39133685156694,0.860234595106124,1.73570250803797,0,0,0.550236083880135,0.417989933073621,0,0,1.67360306382335,2.41697590265488,5.32190474002959,2.19655851793353,1.83831540172934,3.24056779152704,1.07159673940896,0.44905874525234,0.450445921933289,0,1.89853131913626,2.38162267109529,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.150238058906597,0.567160915800105,0,0.213557388818567,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723033089650446,0.55146986366197,0,0.237270619111097,0,0.392442930250692,0.769494313892781,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,3.3204282985047,0.462985512576611,1.52203321787679,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380987365753014,0.381988425558278,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0.542621605391443,0,0,0,0,1.20575750823834,1.74306691720059,1.59956785891291,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0.308033580176089,0,0.869932992075073,0.9266210955196,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0,0.333926115068718,9.55862470515206,0,0.19924798825107,0,0,1.73856760253663,0,0,0.0898683511473268,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32979812218605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,1.94144542218394,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0,0,0,1.50746117111426,0,0,0.195551382734803,0.320635281006135,0,0,0,0,0,0,0,0.942776138467182,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,7.35078091264664,0,0,0,0,0,0,0,1.19730191562487,0,0.511164065356265,0,0,0,0,0,2.05304205461195,0,0,0,0,0,0,0,0,0,0,0,0,5.0257310800075,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0.457680136793847,0,0.310874401165561,0.147855149989634,0,0.449803112163605,0.931577741257556,0.414706207840855,0,0,0.751288044986092,0,0,0.363697318405119,0.107410557042488,0,0,0,0.343395705182793,0,1.26184898228651,0,0,0,0,0,0,0.358177682162975,3.39681591877069,0.877136198314828,0,0,0,0,0,0,0,0,0,0,0,1.72041036127604,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0.690359926060101,0,0.451261970095544,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,1.59363533945908,0,0,4.6301762548103,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,9.42706188406504,0,0,0,0,0,0,0,0.535661815816973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0,0.502055437748735,0,0.407016343054873,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr6:22113505..22113525,+ | |||
}} |
Latest revision as of 22:39, 30 July 2015
Short description: | p@chr6:22113505..22113525, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:22113505..22113525, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.91e-38 | 24 |
blood vessel endothelial cell | 2.05e-30 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.05e-30 | 18 |
endothelial cell | 1.98e-28 | 36 |
lining cell | 3.32e-28 | 58 |
barrier cell | 3.32e-28 | 58 |
meso-epithelial cell | 3.65e-22 | 45 |
capillary endothelial cell | 1.23e-18 | 3 |
mesodermal cell | 2.46e-16 | 121 |
aortic endothelial cell | 1.45e-15 | 6 |
squamous epithelial cell | 4.93e-15 | 63 |
thoracic aorta endothelial cell | 8.49e-13 | 2 |
endothelial cell of artery | 2.00e-10 | 9 |
epithelial cell | 3.80e-10 | 253 |
lymphangioblast | 3.31e-09 | 6 |
endothelial cell of lymphatic vessel | 3.31e-09 | 6 |
vascular lymphangioblast | 3.31e-09 | 6 |
vein endothelial cell | 3.81e-09 | 6 |
embryonic cell | 4.41e-09 | 250 |
peptide hormone secreting cell | 1.55e-07 | 1 |
enteroendocrine cell | 1.55e-07 | 1 |
type D enteroendocrine cell | 1.55e-07 | 1 |
somatostatin secreting cell | 1.55e-07 | 1 |
pancreatic D cell | 1.55e-07 | 1 |
progenitor cell of endocrine pancreas | 1.55e-07 | 1 |
mucus secreting cell | 4.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.55e-07 | 1 |
paranasal sinus cancer | 1.86e-07 | 1 |
maxillary sinus cancer | 1.86e-07 | 1 |
pleomorphic carcinoma | 1.98e-07 | 1 |
mucinous adenocarcinoma | 4.85e-07 | 1 |