FFCP PHASE1:Hg19::chr6:36653968..36653983,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:36653968..36653983,+ | |||
|coexpression_cluster_id=C672 | |||
|description=CAGE_peak_at_chr6:36653968..36653983,+ | |||
|id=chr6:36653968..36653983,+ | |||
|ontology_enrichment_celltype=CL:0002371!4.23e-24!591;CL:0000144!5.85e-23!625;CL:0000548!9.60e-19!679;CL:0000004!9.60e-19!679;CL:0000255!9.60e-19!679;CL:0000012!2.55e-18!682;CL:0002057!2.08e-16!42;CL:0000860!7.49e-14!45;CL:0000723!7.82e-13!436;CL:0000048!9.23e-13!430;CL:0000034!1.07e-11!444;CL:0000063!1.96e-11!578;CL:0002009!6.71e-11!65;CL:0000557!1.75e-10!71;CL:0002194!3.04e-10!63;CL:0000576!3.04e-10!63;CL:0000040!3.04e-10!63;CL:0000559!3.04e-10!63;CL:0000003!5.14e-10!722;CL:0000839!2.12e-09!70;CL:0000766!4.42e-08!76;CL:0002320!7.64e-08!365;CL:0000134!1.01e-07!358;CL:0000055!2.55e-07!180;CL:0000057!6.94e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.10e-27;33!CL:0002057;2.10e-27;33!CL:0000473;2.97e-19;39!CL:0000234;2.97e-19;39!CL:0000576;3.22e-12;48!CL:0000766;2.52e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-24,42;CL:0002057,1.46e-24,42;CL:0000473,2.55e-21,48;CL:0000234,2.55e-21,48;CL:0002009,2.87e-19,61;CL:0002194,7.84e-19,59;CL:0000576,7.84e-19,59;CL:0000040,7.84e-19,59;CL:0000559,7.84e-19,59;CL:0000557,1.51e-17,67;CL:0000839,1.15e-16,66;CL:0000766,3.27e-15,72;CL:0000048,4.14e-12,427;CL:0000723,1.63e-11,433;CL:0000034,9.38e-11,441;CL:0000763,4.92e-09,108;CL:0000049,4.92e-09,108;CL:0000134,5.97e-09,354;CL:0002320,1.07e-08,361;CL:0000136,1.82e-07,15;CL:0000219,6.62e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.75e-15!167;UBERON:0002371!1.21e-10!80;UBERON:0000926!2.31e-10!448;UBERON:0004120!2.31e-10!448;UBERON:0006603!2.31e-10!448;UBERON:0003081!2.61e-10!216;UBERON:0001474!9.24e-10!86;UBERON:0004765!1.98e-09!101;UBERON:0001434!1.98e-09!101;UBERON:0002384!2.32e-07!375;UBERON:0000486!2.35e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.93e-07;6!UBERON:0002358;1.93e-07;6!UBERON:0003684;1.93e-07;6!UBERON:0001178;1.93e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.77e-17,167;UBERON:0002371,7.49e-17,76;UBERON:0001474,1.22e-15,82;UBERON:0004765,4.80e-14,90;UBERON:0001434,5.64e-14,100;UBERON:0000926,4.20e-13,315;UBERON:0004120,4.20e-13,315;UBERON:0006603,4.20e-13,315;UBERON:0002405,4.96e-13,93;UBERON:0002390,3.60e-11,98;UBERON:0003061,3.60e-11,98;UBERON:0003081,5.73e-11,203;UBERON:0002193,2.75e-10,108;UBERON:0002384,3.45e-08,371;UBERON:0003688,2.78e-07,6;UBERON:0002358,2.78e-07,6;UBERON:0003684,2.78e-07,6;UBERON:0001178,2.78e-07,6 | |||
|phase1_expression=1.2717486548939,3.42560838225573,1.69145284915165,5.00366491765652,1.34088328328186,4.36169262050184,5.06599756336621,0,1.04474251279935,1.22866968250754,2.09340350391728,0.436882744260345,1.05506791291381,0.618831764800233,0,4.70627602516243,3.61616716814386,0.730310090387373,1.95173119516203,0,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,1.08371286321253,0,0.30120591877825,1.84877005083394,0,0,0,0,1.00272223735071,0.217010870715852,0.223915474239924,0,0,2.03557534291391,1.13362783106643,0.727752183563449,1.85943229524548,2.87817521615278,2.47765096716083,10.6446185159196,9.47794614157672,14.4254160232037,2.06847408441971,3.87290810150296,5.41705946377367,3.76484679085209,3.27487380069415,3.82029923556644,12.549439587207,2.56743221660875,6.39337125799041,3.62836430205388,7.77908264724364,4.26224750532694,4.35313857942876,2.26954089876456,4.9825779919646,8.54245461872927,6.77927793946262,9.55630916702513,1.21079900526674,2.94622108790052,5.06339819905415,0.422510572623884,1.4882300997553,0.209658645508376,0.898629049171961,0.600707571366025,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0.263384084775077,0,0.786021525498329,0.411202997999018,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0,0.390178042679635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0.144824403882799,0,0,0.12786256184353,0.722878304769133,1.00267582127178,1.01392563272577,0,0.486634870302636,0.378139268656271,0.221729397462564,0.351339142772504,0.130979075497713,1.09288586487763,2.59549109949101,3.24547393654683,2.43781632218974,3.45690697349049,0.476981248610684,0,0,0.198762407366705,0,0,0,0,1.10047216776027,0.208994966536811,1.03366703667732,1.42306505074684,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,0.735326160691737,1.62028389576352,0.267899184852239,0,0.112611480483322,0,0,0,0,0,1.74437620857014,0.993943903390637,1.13967460498122,0.926864265692532,0.286836620748814,2.12801029319014,0.560677600142307,1.06748995729705,3.45334567784024,0.311211035399766,0.538842688278752,0.163461903113459,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.448346041655403,0.23486899728753,0.323745888736263,0.421352420106746,0.816616685019573,0,0.413303124703062,1.18800285728205,2.96720315134268,0.910161361938026,0.718618141816238,0,0.250237039743928,0,0.877955241761676,2.75839016219118,1.80285670687916,0.453728732640084,0.179389635688862,0.85422955527427,0.423863802319124,0.300091096084402,0.412210116953756,1.03056216018252,1.48893485065272,0,0.876933046450788,0.504867548488229,0.920498986422993,1.45481451136931,0.355009592516614,1.71278566986988,0.508681776931463,1.15956511897978,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0.928735856063958,1.44375896333917,0,0,0,0.220587945464788,0,0,0.269662616320329,0.392442930250692,0.769494313892781,0,0,0,0,0,0.982827216677626,0,0,0,0.171567810298526,0.439001141634502,0,0.301586917234893,0.925884451585296,0.977424915930974,0,0,0.231860809950154,1.05667824812239,0.288732895522148,0.462985512576611,0,0,1.71697232418975,0.738651018262192,0.234004265139238,0.297262324577456,1.87467667973554,0.16798212819886,0.283550194484773,0.447792613514241,0.581267877027924,0,0.492663237895943,0,0.829312462163088,1.29707958075265,0.25248486685276,0,1.52795370223311,0,1.71072446022705,0.102827492703324,0.600686115687835,0.571652865261156,0,0,0.1466765716419,0.517086863031111,3.57656445851882,0,0.531876233169741,1.04007436911366,0.514414748524284,1.41849132023278,0.799266537048298,0.428933980974443,1.08524321078289,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.599837947092342,0,1.00451418286425,0,0.958499421966331,1.14861935834114,0,1.30303176000821,0.821905290201534,0.537182889719687,0,0.197030760201927,0.431255149719035,0.385029108839245,0.508189248444927,1.30139853857622,0,0.502548796003046,0,0,0,0.414415513436035,0.12269149171914,0,0.813795071099207,0.415941723061614,2.14114786556594,0.946214490203608,1.05427273493442,0,15.9185252839189,0,0,0.921845842708516,2.08520674723399,1.17480694477644,0.343143423810856,0,2.15714200818617,0,2.12189300012382,8.32177197552485,1.20956117331872,3.47350930946288,1.2276957863045,6.73584226639377,3.20347873139252,1.02341449813341,3.05622450172854,5.93672265779964,0.154209693802656,0.710246901252508,0.246381468041427,1.03850885836724,0.697262270759755,0.120859449591622,3.20810352485256,3.13075362382048,1.83703117063371,0.910455840033585,2.62248829918848,0.451199612907412,0.847168708148562,2.35304930753057,0,1.26661954671451,0,0.510281115829547,0,1.54227252690289,0.270946437543853,0,0.764628819135115,0,0.447749509444357,0,0,0.769350375349168,0.656029291399411,0,0.103041011647722,0.183138929636687,0.082509499920588,0.574265537996172,1.30012049207304,0,0.67669502804485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| |||
|short_description=p@chr6:36653968..36653983,+ | |||
}} |
Latest revision as of 01:10, 31 July 2015
Short description: | p@chr6:36653968..36653983, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:36653968..36653983, + |
Coexpression cluster: | C672_CD14_Smooth_Mesenchymal_Placental_Fibroblast_mesenchymal_Alveolar |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-24 | 42 |
defensive cell | 2.55e-21 | 48 |
phagocyte | 2.55e-21 | 48 |
macrophage dendritic cell progenitor | 2.87e-19 | 61 |
monopoietic cell | 7.84e-19 | 59 |
monocyte | 7.84e-19 | 59 |
monoblast | 7.84e-19 | 59 |
promonocyte | 7.84e-19 | 59 |
granulocyte monocyte progenitor cell | 1.51e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.15e-16 | 66 |
myeloid leukocyte | 3.27e-15 | 72 |
multi fate stem cell | 4.14e-12 | 427 |
somatic stem cell | 1.63e-11 | 433 |
stem cell | 9.38e-11 | 441 |
myeloid cell | 4.92e-09 | 108 |
common myeloid progenitor | 4.92e-09 | 108 |
mesenchymal cell | 5.97e-09 | 354 |
connective tissue cell | 1.07e-08 | 361 |
fat cell | 1.82e-07 | 15 |
motile cell | 6.62e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.77e-17 | 167 |
bone marrow | 7.49e-17 | 76 |
bone element | 1.22e-15 | 82 |
skeletal element | 4.80e-14 | 90 |
skeletal system | 5.64e-14 | 100 |
mesoderm | 4.20e-13 | 315 |
mesoderm-derived structure | 4.20e-13 | 315 |
presumptive mesoderm | 4.20e-13 | 315 |
immune system | 4.96e-13 | 93 |
hematopoietic system | 3.60e-11 | 98 |
blood island | 3.60e-11 | 98 |
lateral plate mesoderm | 5.73e-11 | 203 |
hemolymphoid system | 2.75e-10 | 108 |
connective tissue | 3.45e-08 | 371 |
omentum | 2.78e-07 | 6 |
peritoneum | 2.78e-07 | 6 |
abdominal cavity | 2.78e-07 | 6 |
visceral peritoneum | 2.78e-07 | 6 |