FFCP PHASE1:Hg19::chr7:134625866..134625911,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:134625866..134625911,- | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_at_chr7:134625866..134625911,- | |description=CAGE_peak_at_chr7:134625866..134625911,- | ||
|id=chr7:134625866..134625911,- | |id=chr7:134625866..134625911,- | ||
|ontology_enrichment_celltype=CL:0000055!2.74e-23!180;CL:0000057!5.04e-15!75;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000187!3.23e-08!54;CL:0000393!3.35e-08!60;CL:0000211!3.35e-08!60;CL:0002620!4.95e-08!23;CL:0000183!2.83e-07!59 | |ontology_enrichment_celltype=CL:0000055!2.74e-23!180;CL:0000057!5.04e-15!75;CL:0000680!1.12e-08!57;CL:0000056!1.12e-08!57;CL:0000355!1.12e-08!57;CL:0000187!3.23e-08!54;CL:0000393!3.35e-08!60;CL:0000211!3.35e-08!60;CL:0002620!4.95e-08!23;CL:0000183!2.83e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.18e-08;23!CL:0002334;9.40e-08;12!CL:0000057;2.40e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.79e-19,76;CL:0000048,6.75e-11,427;CL:0000723,2.37e-10,433;CL:0000187,1.06e-09,55;CL:0000034,1.18e-09,441;CL:0000393,6.60e-09,61;CL:0000211,6.60e-09,61;CL:0000680,8.10e-09,58;CL:0000056,8.10e-09,58;CL:0000355,8.10e-09,58;CL:0002620,7.03e-08,23;CL:0002334,8.51e-08,12;CL:0000192,1.99e-07,43;CL:0000514,1.99e-07,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.03e-10!83;UBERON:0002329!3.03e-10!83;UBERON:0003077!3.03e-10!83;UBERON:0003059!3.03e-10!83;UBERON:0007282!3.03e-10!83;UBERON:0009618!3.03e-10!83;UBERON:0007285!3.03e-10!83;UBERON:0005256!1.67e-09!143;UBERON:0000486!4.77e-09!82;UBERON:0004290!4.98e-09!70;UBERON:0002385!8.50e-09!63;UBERON:0001015!8.50e-09!63;UBERON:0000383!8.50e-09!63;UBERON:0002100!9.19e-09!216;UBERON:0000475!1.02e-08!365;UBERON:0003102!1.81e-08!95;UBERON:0000490!2.34e-08!138;UBERON:0001134!3.94e-08!61;UBERON:0002036!3.94e-08!61;UBERON:0003082!3.94e-08!61;UBERON:0000468!5.95e-08!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.42e-07;9!UBERON:0000042;1.42e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,6.63e-10,73;UBERON:0002329,1.68e-09,71;UBERON:0003059,1.68e-09,71;UBERON:0007282,1.68e-09,71;UBERON:0004290,1.68e-09,71;UBERON:0009618,1.68e-09,71;UBERON:0003077,2.99e-09,72;UBERON:0007285,2.99e-09,72;UBERON:0002385,5.84e-09,64;UBERON:0001015,5.84e-09,64;UBERON:0000383,5.84e-09,64;UBERON:0001134,1.43e-08,62;UBERON:0002036,1.43e-08,62;UBERON:0003082,1.43e-08,62;UBERON:0000486,2.18e-08,83;UBERON:0007503,6.77e-08,78;UBERON:0005256,1.21e-07,122;UBERON:0002199,8.00e-07,46;UBERON:0002416,8.00e-07,46 | |||
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| ||
|short_description=p@chr7:134625866..134625911,- | |short_description=p@chr7:134625866..134625911,- | ||
}} | }} |
Latest revision as of 06:20, 31 July 2015
Short description: | p@chr7:134625866..134625911, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:134625866..134625911, - |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.79e-19 | 76 |
multi fate stem cell | 6.75e-11 | 427 |
somatic stem cell | 2.37e-10 | 433 |
muscle cell | 1.06e-09 | 55 |
stem cell | 1.18e-09 | 441 |
electrically responsive cell | 6.60e-09 | 61 |
electrically active cell | 6.60e-09 | 61 |
muscle precursor cell | 8.10e-09 | 58 |
myoblast | 8.10e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.10e-09 | 58 |
skin fibroblast | 7.03e-08 | 23 |
preadipocyte | 8.51e-08 | 12 |
smooth muscle cell | 1.99e-07 | 43 |
smooth muscle myoblast | 1.99e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 6.63e-10 | 73 |
somite | 1.68e-09 | 71 |
presomitic mesoderm | 1.68e-09 | 71 |
presumptive segmental plate | 1.68e-09 | 71 |
dermomyotome | 1.68e-09 | 71 |
trunk paraxial mesoderm | 1.68e-09 | 71 |
paraxial mesoderm | 2.99e-09 | 72 |
presumptive paraxial mesoderm | 2.99e-09 | 72 |
muscle tissue | 5.84e-09 | 64 |
musculature | 5.84e-09 | 64 |
musculature of body | 5.84e-09 | 64 |
skeletal muscle tissue | 1.43e-08 | 62 |
striated muscle tissue | 1.43e-08 | 62 |
myotome | 1.43e-08 | 62 |
multilaminar epithelium | 2.18e-08 | 83 |
epithelial vesicle | 6.77e-08 | 78 |
trunk mesenchyme | 1.21e-07 | 122 |
integument | 8.00e-07 | 46 |
integumental system | 8.00e-07 | 46 |