FFCP PHASE1:Hg19::chr7:150328692..150328707,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:150328692..150328707,- | |||
|description=CAGE_peak_at_chr7:150328692..150328707,- | |||
|id=chr7:150328692..150328707,- | |||
|ontology_enrichment_celltype=CL:0000115!2.00e-27!35;CL:0002139!6.48e-25!24;CL:0002078!3.16e-21!44;CL:0000071!5.95e-19!18;CL:0002546!5.95e-19!18;CL:0000791!1.30e-15!18;CL:0000789!1.30e-15!18;CL:0002420!1.30e-15!18;CL:0002419!1.30e-15!18;CL:0000790!1.30e-15!18;CL:0000213!4.53e-14!57;CL:0000215!4.53e-14!57;CL:0000625!1.33e-12!11;CL:0000084!3.89e-11!25;CL:0000827!3.89e-11!25;CL:1000413!2.57e-10!9;CL:0002087!8.79e-09!119;CL:0000838!4.53e-08!52;CL:0000542!8.52e-08!53;CL:0000051!8.52e-08!53;CL:0005020!1.64e-07!6;CL:0002138!1.64e-07!6;CL:0005022!1.64e-07!6;CL:0002031!2.08e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.09e-57;18!CL:0002139;9.51e-55;24!CL:0000115;1.70e-40;36!CL:1000413;3.13e-33;9!CL:0000625;1.77e-29;11!CL:0002078;1.03e-26;45!CL:0000791;6.60e-22;18!CL:0000789;6.60e-22;18!CL:0002419;6.60e-22;18!CL:0002544;3.25e-20;6!CL:0000213;4.99e-19;58!CL:0000215;4.99e-19;58!CL:0002144;2.54e-15;3!CL:0000084;2.59e-15;25!CL:0002543;1.39e-13;6!CL:0000076;1.24e-08;63!CL:0002618;2.50e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,3.73e-57,18;CL:0002546,3.73e-57,18;CL:0002139,1.97e-54,24;CL:0000115,1.72e-49,36;CL:0002078,1.12e-38,45;CL:1000413,3.77e-33,9;CL:0000625,1.63e-29,11;CL:0000213,5.55e-29,58;CL:0000215,5.55e-29,58;CL:0000791,7.43e-22,18;CL:0000789,7.43e-22,18;CL:0002420,7.43e-22,18;CL:0002419,7.43e-22,18;CL:0000790,7.43e-22,18;CL:0002544,2.90e-20,6;CL:0000084,2.81e-15,25;CL:0000827,2.81e-15,25;CL:0002144,2.82e-15,3;CL:0000076,5.44e-14,63;CL:0002543,2.98e-13,6;CL:0000222,1.48e-11,121;CL:0002618,4.89e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.09e-57;18!CL:0000790;6.60e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.38e-24!115;UBERON:0001986!5.95e-19!18;UBERON:0004638!5.95e-19!18;UBERON:0004852!5.95e-19!18;UBERON:0000487!1.76e-14!22;UBERON:0006914!1.16e-13!25;UBERON:0003915!2.57e-10!9;UBERON:0004700!2.57e-10!9;UBERON:0001917!2.57e-10!9;UBERON:0000055!9.02e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.09e-57;18!UBERON:0001986;1.09e-57;18!UBERON:0004852;1.09e-57;18!UBERON:0000487;1.34e-46;22!UBERON:0006914;1.31e-40;25!UBERON:0003915;3.13e-33;9!UBERON:0004700;3.13e-33;9!UBERON:0001917;3.13e-33;9!UBERON:0000490;5.75e-27;33!UBERON:0010523;2.54e-15;3!UBERON:0001915;2.54e-15;3!UBERON:0001982;2.54e-15;3!UBERON:0000178;5.85e-15;15!UBERON:0000179;5.85e-15;15!UBERON:0000463;5.85e-15;15!UBERON:0000055;5.44e-13;65!UBERON:0007500;1.19e-12;56!UBERON:0001981;1.19e-12;56!UBERON:0004537;1.19e-12;56!UBERON:0001638;4.36e-09;9!UBERON:0003920;4.36e-09;9!UBERON:0004582;4.36e-09;9!UBERON:0003914;3.31e-08;74!UBERON:0001009;6.01e-08;112!UBERON:0004535;6.68e-08;109!UBERON:0002049;1.11e-07;75!UBERON:0007798;1.11e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.73e-57,18;UBERON:0001986,3.73e-57,18;UBERON:0004852,3.73e-57,18;UBERON:0000487,3.63e-46,22;UBERON:0006914,3.13e-40,25;UBERON:0003915,3.77e-33,9;UBERON:0004700,3.77e-33,9;UBERON:0001917,3.77e-33,9;UBERON:0004535,3.35e-22,109;UBERON:0001009,1.86e-21,112;UBERON:0000055,5.65e-19,68;UBERON:0007500,2.02e-17,59;UBERON:0001981,2.02e-17,59;UBERON:0004537,2.02e-17,59;UBERON:0006965,2.02e-17,59;UBERON:0002049,5.00e-16,78;UBERON:0007798,5.00e-16,78;UBERON:0010523,2.82e-15,3;UBERON:0001915,2.82e-15,3;UBERON:0001982,2.82e-15,3;UBERON:0000178,3.75e-15,15;UBERON:0000179,3.75e-15,15;UBERON:0000463,3.75e-15,15;UBERON:0003081,1.40e-12,203;UBERON:0004872,2.21e-11,83;UBERON:0003914,1.90e-09,117;UBERON:0001638,7.18e-09,9;UBERON:0003920,7.18e-09,9;UBERON:0004582,7.18e-09,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0.727752183563449,0,0.411167888021826,0.309706370895104,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0.989553900560148,0.797854630486527,0.426224750532694,0.290209238628584,0,0,0,0.521482918420201,0,0.605399502633369,1.47311054395026,0.316462387440884,0.211255286311942,0,0.209658645508376,0,0,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0.590129310341499,0.786021525498329,0.616804496998528,0,0.651844533267181,0.946895611469467,0,0.668462741311041,0,0.221533894583621,0,0.512365278902701,0.130059347559878,0.822189523018381,1.10540007114339,1.73881851441031,0.889719378972363,0.535081656179426,0,0.226618685395132,1.14966148080576,0,0.759059076058509,6.68987370080603,4.55758417699493,2.85135613334512,4.06552821509986,5.88738411310325,7.49584359314075,4.2619905367923,4.92676798152628,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,1.98762407366705,4.30117297553062,1.73570250803797,1.13061588384802,1.25849830862972,1.37559020970034,1.25396979922086,0.258416759169329,0.35576626268671,1.67360306382335,1.20848795132744,1.52054421143703,2.19655851793353,1.10298924103761,0,0.714397826272638,1.12264686313085,1.0135033243499,0,6.6448596169769,2.01521918323448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,1.38895653772983,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,0.680374821106063,0.215915916102139,3.08454505380579,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,1.52234282769651,1.52927441428475,1.70894156152249,1.19115887728894,0.411362273086194,1.29694662238543,1.62009431171434,3.96562588147135,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0.0846733320657845,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.472834243795189,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.39669780522807,0,0,1.28144895081234,0.471612915298998,0.414239055347196,0,0,0,0,0.544017803369474,0.2506898940227,0.919036730290385,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,2.48105589194647,0,0,0,0,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.375935671919414,0.193373663920732,0,0,0,0,0.730336388246517,0,0.430018749454354,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0.342233301085281,0.336760265072938,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0.665756774185513,0,0 | |||
|short_description=p@chr7:150328692..150328707,- | |||
}} |
Latest revision as of 07:26, 31 July 2015
Short description: | p@chr7:150328692..150328707, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:150328692..150328707, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 3.73e-57 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.73e-57 | 18 |
endothelial cell of vascular tree | 1.97e-54 | 24 |
endothelial cell | 1.72e-49 | 36 |
meso-epithelial cell | 1.12e-38 | 45 |
endothelial cell of artery | 3.77e-33 | 9 |
CD8-positive, alpha-beta T cell | 1.63e-29 | 11 |
lining cell | 5.55e-29 | 58 |
barrier cell | 5.55e-29 | 58 |
mature alpha-beta T cell | 7.43e-22 | 18 |
alpha-beta T cell | 7.43e-22 | 18 |
immature T cell | 7.43e-22 | 18 |
mature T cell | 7.43e-22 | 18 |
immature alpha-beta T cell | 7.43e-22 | 18 |
aortic endothelial cell | 2.90e-20 | 6 |
T cell | 2.81e-15 | 25 |
pro-T cell | 2.81e-15 | 25 |
capillary endothelial cell | 2.82e-15 | 3 |
squamous epithelial cell | 5.44e-14 | 63 |
vein endothelial cell | 2.98e-13 | 6 |
mesodermal cell | 1.48e-11 | 121 |
endothelial cell of umbilical vein | 4.89e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.73e-57 | 18 |
endothelium | 3.73e-57 | 18 |
cardiovascular system endothelium | 3.73e-57 | 18 |
simple squamous epithelium | 3.63e-46 | 22 |
squamous epithelium | 3.13e-40 | 25 |
endothelial tube | 3.77e-33 | 9 |
arterial system endothelium | 3.77e-33 | 9 |
endothelium of artery | 3.77e-33 | 9 |
cardiovascular system | 3.35e-22 | 109 |
circulatory system | 1.86e-21 | 112 |
vessel | 5.65e-19 | 68 |
epithelial tube open at both ends | 2.02e-17 | 59 |
blood vessel | 2.02e-17 | 59 |
blood vasculature | 2.02e-17 | 59 |
vascular cord | 2.02e-17 | 59 |
vasculature | 5.00e-16 | 78 |
vascular system | 5.00e-16 | 78 |
microcirculatory vessel | 2.82e-15 | 3 |
endothelium of capillary | 2.82e-15 | 3 |
capillary | 2.82e-15 | 3 |
blood | 3.75e-15 | 15 |
haemolymphatic fluid | 3.75e-15 | 15 |
organism substance | 3.75e-15 | 15 |
lateral plate mesoderm | 1.40e-12 | 203 |
splanchnic layer of lateral plate mesoderm | 2.21e-11 | 83 |
epithelial tube | 1.90e-09 | 117 |
vein | 7.18e-09 | 9 |
venous blood vessel | 7.18e-09 | 9 |
venous system | 7.18e-09 | 9 |