FFCP PHASE1:Hg19::chr7:17409475..17409478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:17409475..17409478,- | |||
|coexpression_cluster_id=C3728 | |||
|description=CAGE_peak_at_chr7:17409475..17409478,- | |description=CAGE_peak_at_chr7:17409475..17409478,- | ||
|id=chr7:17409475..17409478,- | |id=chr7:17409475..17409478,- | ||
|ontology_enrichment_celltype=CL:0002570!1.33e-12!8;CL:0000569!2.61e-09!4;CL:0000011!2.61e-09!4;CL:0002583!5.70e-09!2;CL:0000080!4.98e-07!6;CL:0002371!5.26e-07!591 | |ontology_enrichment_celltype=CL:0002570!1.33e-12!8;CL:0000569!2.61e-09!4;CL:0000011!2.61e-09!4;CL:0002583!5.70e-09!2;CL:0000080!4.98e-07!6;CL:0002371!5.26e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.45e-12;2!CL:0000048;2.95e-09;58!CL:0000723;1.55e-08;61!CL:0000134;1.05e-07;55!CL:0000034;3.35e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.24e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.88e-23!14;DOID:120!3.73e-11!27;DOID:193!2.88e-10!29 | |ontology_enrichment_disease=DOID:2394!3.88e-23!14;DOID:120!3.73e-11!27;DOID:193!2.88e-10!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.27e-39;14!DOID:120;1.36e-20;27!DOID:193;3.42e-19;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.67e-39,14;DOID:120,1.48e-20,27;DOID:193,3.69e-19,29 | |||
|ontology_enrichment_uberon=UBERON:0002118!8.42e-14!5;UBERON:0004532!8.42e-14!5;UBERON:0000992!2.68e-11!13;UBERON:0001013!4.62e-07!14 | |ontology_enrichment_uberon=UBERON:0002118!8.42e-14!5;UBERON:0004532!8.42e-14!5;UBERON:0000992!2.68e-11!13;UBERON:0001013!4.62e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002119;3.88e-23;4!UBERON:0000992;5.42e-16;13!UBERON:0002456;2.45e-12;2!UBERON:0000991;3.68e-10;21!UBERON:0002331;8.83e-10;10!UBERON:0000178;8.09e-07;15!UBERON:0000179;8.09e-07;15!UBERON:0000463;8.09e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002119,4.60e-23,4;UBERON:0000992,4.90e-16,13;UBERON:0002456,3.24e-12,2;UBERON:0000991,3.46e-10,21;UBERON:0009196,3.46e-10,21;UBERON:0009117,3.46e-10,21;UBERON:0005564,3.46e-10,21;UBERON:0002331,7.74e-10,10;UBERON:0000358,7.74e-10,10;UBERON:0000307,7.74e-10,10;UBERON:0000091,7.74e-10,10;UBERON:0000087,7.74e-10,10;UBERON:0007010,7.74e-10,10;UBERON:0007806,7.74e-10,10;UBERON:0008780,7.74e-10,10;UBERON:0005728,7.74e-10,10;UBERON:0004176,9.40e-10,22;UBERON:0000178,7.41e-07,15;UBERON:0000179,7.41e-07,15;UBERON:0000463,7.41e-07,15 | |||
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| ||
|short_description=p@chr7:17409475..17409478,- | |short_description=p@chr7:17409475..17409478,- | ||
}} | }} |
Latest revision as of 08:12, 31 July 2015
Short description: | p@chr7:17409475..17409478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:17409475..17409478, - |
Coexpression cluster: | C3728_mesenchymal_Preadipocyte_Fibroblast_chorionic_Hair_cord_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
left ovary | 4.60e-23 | 4 |
female gonad | 4.90e-16 | 13 |
internal thoracic artery | 3.24e-12 | 2 |
gonad | 3.46e-10 | 21 |
indifferent external genitalia | 3.46e-10 | 21 |
indifferent gonad | 3.46e-10 | 21 |
gonad primordium | 3.46e-10 | 21 |
umbilical cord | 7.74e-10 | 10 |
blastocyst | 7.74e-10 | 10 |
blastula | 7.74e-10 | 10 |
bilaminar disc | 7.74e-10 | 10 |
inner cell mass | 7.74e-10 | 10 |
cleaving embryo | 7.74e-10 | 10 |
connecting stalk | 7.74e-10 | 10 |
inner cell mass derived epiblast | 7.74e-10 | 10 |
extraembryonic mesoderm | 7.74e-10 | 10 |
external genitalia | 9.40e-10 | 22 |
blood | 7.41e-07 | 15 |
haemolymphatic fluid | 7.41e-07 | 15 |
organism substance | 7.41e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.67e-39 | 14 |
female reproductive organ cancer | 1.48e-20 | 27 |
reproductive organ cancer | 3.69e-19 | 29 |