FFCP PHASE1:Hg19::chr7:27164759..27164766,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:27164759..27164766,- | |||
|coexpression_cluster_id=C224 | |coexpression_cluster_id=C224 | ||
|description=CAGE_peak_at_chr7:27164759..27164766,- | |description=CAGE_peak_at_chr7:27164759..27164766,- | ||
|id=chr7:27164759..27164766,- | |id=chr7:27164759..27164766,- | ||
|ontology_enrichment_celltype=CL:1000497!2.79e-21!18;CL:0002518!2.79e-21!18;CL:1000507!9.00e-21!12;CL:1000494!9.00e-21!12;CL:1000449!1.13e-15!16;CL:0002253!7.49e-09!2 | |ontology_enrichment_celltype=CL:1000497!2.79e-21!18;CL:0002518!2.79e-21!18;CL:1000507!9.00e-21!12;CL:1000494!9.00e-21!12;CL:1000449!1.13e-15!16;CL:0002253!7.49e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000650;5.69e-21;2!CL:1000500;5.69e-21;2!CL:1000618;5.69e-21;2!CL:1001318;5.69e-21;2!CL:0002173;5.69e-21;2!CL:1000507;7.51e-17;10!CL:1000494;7.51e-17;10!CL:1000449;1.34e-11;15!CL:0000669;3.42e-11;4!CL:1000497;2.35e-10;17!CL:0002518;2.35e-10;17!CL:0002149;6.78e-08;6!CL:0002255;6.78e-08;6!CL:1000746;6.04e-07;7!CL:1000612;6.04e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,4.66e-21,2;CL:1000500,4.66e-21,2;CL:1000618,4.66e-21,2;CL:1001318,4.66e-21,2;CL:0002173,4.66e-21,2;CL:1000507,6.93e-17,10;CL:1000494,6.93e-17,10;CL:1000449,1.27e-11,15;CL:0000669,3.10e-11,4;CL:1000497,2.24e-10,17;CL:0002518,2.24e-10,17;CL:0002149,6.78e-08,6;CL:0002255,6.78e-08,6;CL:1000746,5.70e-07,7;CL:1000612,5.70e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!3.43e-09!2 | |ontology_enrichment_disease=DOID:4468!3.43e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:4468;3.11e-21;2!DOID:3001;6.78e-08;6!DOID:299;2.28e-07;25!DOID:120;6.82e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.11e-21,2;DOID:3001,6.78e-08,6;DOID:299,2.28e-07,25;DOID:120,6.82e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0002113!1.67e-35!27;UBERON:0003918!1.67e-35!27;UBERON:0005095!1.67e-35!27;UBERON:0007687!1.67e-35!27;UBERON:0000489!6.89e-30!32;UBERON:0006555!1.67e-22!17;UBERON:0005103!1.67e-22!17;UBERON:0000083!1.67e-22!17;UBERON:0009201!1.67e-22!17;UBERON:0004819!1.67e-22!17;UBERON:0006553!1.67e-22!17;UBERON:0003074!1.67e-22!17;UBERON:0003060!1.67e-22!17;UBERON:0006554!1.33e-21!44;UBERON:0000080!2.91e-21!18;UBERON:0002120!2.91e-21!18;UBERON:0004875!2.91e-21!18;UBERON:0005721!2.91e-21!18;UBERON:0005754!2.91e-21!18;UBERON:0007297!2.91e-21!18;UBERON:0001008!4.13e-21!45;UBERON:0009773!9.00e-21!12;UBERON:0001231!9.00e-21!12;UBERON:0004810!9.00e-21!12;UBERON:0004876!3.78e-19!20;UBERON:0003887!3.05e-18!21;UBERON:0005172!3.59e-17!55;UBERON:0005173!3.59e-17!55;UBERON:0001301!1.93e-16!1;UBERON:0004211!1.13e-15!16;UBERON:0001285!1.13e-15!16;UBERON:0007684!1.13e-15!16;UBERON:0003220!1.13e-15!16;UBERON:0004208!1.13e-15!16;UBERON:0002417!2.00e-15!61;UBERON:0000916!2.00e-15!61;UBERON:0000058!9.46e-15!26;UBERON:0003103!1.45e-13!69;UBERON:0003064!2.25e-10!37;UBERON:0005177!1.64e-08!107;UBERON:0009569!5.08e-08!113 | |ontology_enrichment_uberon=UBERON:0002113!1.67e-35!27;UBERON:0003918!1.67e-35!27;UBERON:0005095!1.67e-35!27;UBERON:0007687!1.67e-35!27;UBERON:0000489!6.89e-30!32;UBERON:0006555!1.67e-22!17;UBERON:0005103!1.67e-22!17;UBERON:0000083!1.67e-22!17;UBERON:0009201!1.67e-22!17;UBERON:0004819!1.67e-22!17;UBERON:0006553!1.67e-22!17;UBERON:0003074!1.67e-22!17;UBERON:0003060!1.67e-22!17;UBERON:0006554!1.33e-21!44;UBERON:0000080!2.91e-21!18;UBERON:0002120!2.91e-21!18;UBERON:0004875!2.91e-21!18;UBERON:0005721!2.91e-21!18;UBERON:0005754!2.91e-21!18;UBERON:0007297!2.91e-21!18;UBERON:0001008!4.13e-21!45;UBERON:0009773!9.00e-21!12;UBERON:0001231!9.00e-21!12;UBERON:0004810!9.00e-21!12;UBERON:0004876!3.78e-19!20;UBERON:0003887!3.05e-18!21;UBERON:0005172!3.59e-17!55;UBERON:0005173!3.59e-17!55;UBERON:0001301!1.93e-16!1;UBERON:0004211!1.13e-15!16;UBERON:0001285!1.13e-15!16;UBERON:0007684!1.13e-15!16;UBERON:0003220!1.13e-15!16;UBERON:0004208!1.13e-15!16;UBERON:0002417!2.00e-15!61;UBERON:0000916!2.00e-15!61;UBERON:0000058!9.46e-15!26;UBERON:0003103!1.45e-13!69;UBERON:0003064!2.25e-10!37;UBERON:0005177!1.64e-08!107;UBERON:0009569!5.08e-08!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003567;5.69e-21;2!UBERON:0003838;5.69e-21;2!UBERON:0003586;5.69e-21;2!UBERON:0005169;5.69e-21;2!UBERON:0002321;5.69e-21;2!UBERON:0005215;5.69e-21;2!UBERON:0002303;5.69e-21;2!UBERON:0002319;5.69e-21;2!UBERON:0004211;7.51e-17;10!UBERON:0009773;7.51e-17;10!UBERON:0001231;7.51e-17;10!UBERON:0004810;7.51e-17;10!UBERON:0002113;1.25e-15;24!UBERON:0011143;1.25e-15;24!UBERON:0000489;4.36e-13;29!UBERON:0006554;1.11e-12;30!UBERON:0001008;1.11e-12;30!UBERON:0006555;1.34e-11;15!UBERON:0004819;1.34e-11;15!UBERON:0001285;1.34e-11;15!UBERON:0007684;1.34e-11;15!UBERON:0003891;3.42e-11;4!UBERON:0005172;1.98e-07;52!UBERON:0005173;1.98e-07;52!UBERON:0000074;6.04e-07;7!UBERON:0001229;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,4.66e-21,2;UBERON:0003838,4.66e-21,2;UBERON:0003586,4.66e-21,2;UBERON:0005169,4.66e-21,2;UBERON:0002321,4.66e-21,2;UBERON:0005215,4.66e-21,2;UBERON:0002303,4.66e-21,2;UBERON:0002319,4.66e-21,2;UBERON:0004810,6.93e-17,10;UBERON:0002113,1.70e-14,26;UBERON:0003918,1.70e-14,26;UBERON:0011143,1.70e-14,26;UBERON:0005095,1.70e-14,26;UBERON:0007687,1.70e-14,26;UBERON:0000489,2.68e-12,31;UBERON:0004211,1.27e-11,15;UBERON:0009773,1.27e-11,15;UBERON:0001231,1.27e-11,15;UBERON:0001285,1.27e-11,15;UBERON:0007684,1.27e-11,15;UBERON:0004208,1.27e-11,15;UBERON:0003891,3.10e-11,4;UBERON:0006555,5.84e-11,16;UBERON:0004819,5.84e-11,16;UBERON:0006554,2.21e-08,47;UBERON:0001008,3.19e-08,48;UBERON:0005172,2.17e-07,54;UBERON:0005173,2.17e-07,54;UBERON:0010532,5.70e-07,7;UBERON:0000074,5.70e-07,7;UBERON:0001229,5.70e-07,7;UBERON:0001230,5.70e-07,7;UBERON:0003220,5.70e-07,7;UBERON:0005749,5.70e-07,7;UBERON:0004199,5.70e-07,7;UBERON:0004209,5.70e-07,7;UBERON:0004198,5.70e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,2.92278449306521,0.105551628892876,0,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24405301213784,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784349769176855,2.92278449306521,0.105551628892876,0,0,0,0,0,1.50506932156456,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.24405301213784,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.86686278029118,1.15400093896996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:27164759..27164766,- | |short_description=p@chr7:27164759..27164766,- | ||
}} | }} |
Latest revision as of 09:01, 31 July 2015
Short description: | p@chr7:27164759..27164766, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:27164759..27164766, - |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 4.66e-21 | 2 |
kidney interstitial cell | 4.66e-21 | 2 |
juxtaglomerular complex cell | 4.66e-21 | 2 |
renal interstitial pericyte | 4.66e-21 | 2 |
extraglomerular mesangial cell | 4.66e-21 | 2 |
kidney tubule cell | 6.93e-17 | 10 |
nephron tubule epithelial cell | 6.93e-17 | 10 |
epithelial cell of nephron | 1.27e-11 | 15 |
pericyte cell | 3.10e-11 | 4 |
kidney cell | 2.24e-10 | 17 |
kidney epithelial cell | 2.24e-10 | 17 |
epithelial cell of uterus | 6.78e-08 | 6 |
stromal cell of endometrium | 6.78e-08 | 6 |
glomerular cell | 5.70e-07 | 7 |
kidney corpuscule cell | 5.70e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.11e-21 | 2 |
female reproductive endometrioid cancer | 6.78e-08 | 6 |
adenocarcinoma | 2.28e-07 | 25 |
female reproductive organ cancer | 6.82e-07 | 27 |