FFCP PHASE1:Hg19::chr8:130560925..130560948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:130560925..130560948,- | |||
|coexpression_cluster_id=C1286 | |||
|description=CAGE_peak_at_chr8:130560925..130560948,- | |description=CAGE_peak_at_chr8:130560925..130560948,- | ||
|id=chr8:130560925..130560948,- | |id=chr8:130560925..130560948,- | ||
|ontology_enrichment_celltype=CL:0002057!6.58e-35!42;CL:0000763!5.24e-33!112;CL:0000049!5.24e-33!112;CL:0000860!9.33e-32!45;CL:0002009!5.60e-31!65;CL:0002194!9.72e-31!63;CL:0000576!9.72e-31!63;CL:0000040!9.72e-31!63;CL:0000559!9.72e-31!63;CL:0000557!7.20e-29!71;CL:0000037!1.86e-27!172;CL:0000566!1.86e-27!172;CL:0000839!2.76e-26!70;CL:0000766!8.43e-26!76;CL:0002032!2.43e-25!165;CL:0000837!2.43e-25!165;CL:0000988!1.06e-24!182;CL:0002087!1.44e-21!119;CL:0000738!1.99e-18!140;CL:0002031!4.11e-18!124;CL:0002393!2.31e-13!9;CL:0002397!2.31e-13!9 | |ontology_enrichment_celltype=CL:0002057!6.58e-35!42;CL:0000763!5.24e-33!112;CL:0000049!5.24e-33!112;CL:0000860!9.33e-32!45;CL:0002009!5.60e-31!65;CL:0002194!9.72e-31!63;CL:0000576!9.72e-31!63;CL:0000040!9.72e-31!63;CL:0000559!9.72e-31!63;CL:0000557!7.20e-29!71;CL:0000037!1.86e-27!172;CL:0000566!1.86e-27!172;CL:0000839!2.76e-26!70;CL:0000766!8.43e-26!76;CL:0002032!2.43e-25!165;CL:0000837!2.43e-25!165;CL:0000988!1.06e-24!182;CL:0002087!1.44e-21!119;CL:0000738!1.99e-18!140;CL:0002031!4.11e-18!124;CL:0002393!2.31e-13!9;CL:0002397!2.31e-13!9 | ||
|ontology_enrichment_celltype_v019=CL:0000763;1.09e-14;100!CL:0000576;1.16e-14;48!CL:0000875;1.34e-11;3!CL:0002396;1.34e-11;3!CL:0000766;1.13e-09;69!CL:0002393;4.69e-09;6!CL:0002397;4.69e-09;6!CL:0000860;6.61e-09;33!CL:0002057;6.61e-09;33!CL:0000988;2.64e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.13e-38,108;CL:0000049,1.13e-38,108;CL:0000037,9.07e-29,168;CL:0002032,2.50e-27,161;CL:0000837,2.50e-27,161;CL:0000988,9.34e-27,177;CL:0002194,5.01e-25,59;CL:0000576,5.01e-25,59;CL:0000040,5.01e-25,59;CL:0000559,5.01e-25,59;CL:0002009,5.15e-24,61;CL:0000557,2.04e-23,67;CL:0000839,9.44e-22,66;CL:0000766,2.98e-21,72;CL:0000860,5.89e-20,42;CL:0002057,5.89e-20,42;CL:0002393,6.91e-18,9;CL:0002397,6.91e-18,9;CL:0000473,6.70e-17,48;CL:0000234,6.70e-17,48;CL:0002087,9.42e-15,115;CL:0002031,1.07e-12,120;CL:0000738,1.86e-12,136;CL:0000875,1.32e-11,3;CL:0002396,1.32e-11,3;CL:0000134,1.04e-08,354;CL:0002320,2.44e-08,361;CL:0000219,4.79e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.46e-15;42!CL:0000049;1.24e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!1.00e-11!31;DOID:1240!8.70e-11!39;DOID:2531!1.10e-08!51;DOID:0060083!1.10e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.71e-26;31!DOID:1240;1.23e-20;39!DOID:2531;1.05e-12;51!DOID:0060083;1.05e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,6.84e-28,31;DOID:1240,5.85e-27,39;DOID:2531,9.99e-22,51;DOID:0060083,9.99e-22,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-30!102;UBERON:0003061!3.15e-30!102;UBERON:0002193!4.47e-27!112;UBERON:0002371!1.73e-25!80;UBERON:0002405!8.02e-24!115;UBERON:0001474!1.06e-22!86;UBERON:0007023!7.85e-19!115;UBERON:0004765!3.01e-17!101;UBERON:0001434!3.01e-17!101;UBERON:0001049!1.45e-16!57;UBERON:0005068!1.45e-16!57;UBERON:0006241!1.45e-16!57;UBERON:0007135!1.45e-16!57;UBERON:0002020!1.07e-13!34;UBERON:0003528!1.07e-13!34;UBERON:0001893!1.35e-13!34;UBERON:0002616!2.40e-13!59;UBERON:0002791!7.07e-13!33;UBERON:0002780!1.16e-12!41;UBERON:0001890!1.16e-12!41;UBERON:0006240!1.16e-12!41;UBERON:0003080!3.32e-12!42;UBERON:0001869!7.95e-12!32;UBERON:0000955!7.88e-11!69;UBERON:0006238!7.88e-11!69;UBERON:0002619!1.43e-10!22;UBERON:0001950!2.82e-10!20;UBERON:0001017!4.49e-10!82;UBERON:0005743!7.45e-10!86;UBERON:0003075!2.69e-09!86;UBERON:0007284!2.69e-09!86;UBERON:0000956!7.05e-09!25;UBERON:0000203!7.05e-09!25;UBERON:0002346!1.70e-08!90;UBERON:0000073!4.30e-08!94;UBERON:0001016!4.30e-08!94;UBERON:0004177!2.45e-07!7;UBERON:0000200!3.35e-07!6;UBERON:0003056!3.83e-07!61;UBERON:0003081!6.99e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.92e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.83e-25,98;UBERON:0003061,2.83e-25,98;UBERON:0002405,2.17e-23,93;UBERON:0002193,3.38e-22,108;UBERON:0002371,9.34e-22,76;UBERON:0001474,1.08e-19,82;UBERON:0004765,2.25e-17,90;UBERON:0001434,5.32e-15,100;UBERON:0002106,1.80e-10,3;UBERON:0004854,1.80e-10,3;UBERON:0009034,1.80e-10,3;UBERON:0002095,1.80e-10,3;UBERON:0004782,1.80e-10,3;UBERON:0003281,1.80e-10,3;UBERON:0009664,1.80e-10,3;UBERON:0002296,1.80e-10,3;UBERON:0005602,1.80e-10,3;UBERON:0001179,1.80e-10,3;UBERON:0006293,1.80e-10,3;UBERON:0003081,3.12e-08,203;UBERON:0002384,7.75e-08,371;UBERON:0004177,9.84e-08,7;UBERON:0005057,9.84e-08,7 | |||
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|short_description=p@chr8:130560925..130560948,- | |short_description=p@chr8:130560925..130560948,- | ||
}} | }} |
Latest revision as of 15:02, 31 July 2015
Short description: | p@chr8:130560925..130560948, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:130560925..130560948, - |
Coexpression cluster: | C1286_myelodysplastic_acute_leukemia_biphenotypic_CD14CD16_splenic_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.13e-38 | 108 |
common myeloid progenitor | 1.13e-38 | 108 |
hematopoietic stem cell | 9.07e-29 | 168 |
hematopoietic oligopotent progenitor cell | 2.50e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.50e-27 | 161 |
hematopoietic cell | 9.34e-27 | 177 |
monopoietic cell | 5.01e-25 | 59 |
monocyte | 5.01e-25 | 59 |
monoblast | 5.01e-25 | 59 |
promonocyte | 5.01e-25 | 59 |
macrophage dendritic cell progenitor | 5.15e-24 | 61 |
granulocyte monocyte progenitor cell | 2.04e-23 | 67 |
myeloid lineage restricted progenitor cell | 9.44e-22 | 66 |
myeloid leukocyte | 2.98e-21 | 72 |
classical monocyte | 5.89e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.89e-20 | 42 |
intermediate monocyte | 6.91e-18 | 9 |
CD14-positive, CD16-positive monocyte | 6.91e-18 | 9 |
defensive cell | 6.70e-17 | 48 |
phagocyte | 6.70e-17 | 48 |
nongranular leukocyte | 9.42e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 1.07e-12 | 120 |
leukocyte | 1.86e-12 | 136 |
non-classical monocyte | 1.32e-11 | 3 |
CD14-low, CD16-positive monocyte | 1.32e-11 | 3 |
mesenchymal cell | 1.04e-08 | 354 |
connective tissue cell | 2.44e-08 | 361 |
motile cell | 4.79e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.83e-25 | 98 |
blood island | 2.83e-25 | 98 |
immune system | 2.17e-23 | 93 |
hemolymphoid system | 3.38e-22 | 108 |
bone marrow | 9.34e-22 | 76 |
bone element | 1.08e-19 | 82 |
skeletal element | 2.25e-17 | 90 |
skeletal system | 5.32e-15 | 100 |
spleen | 1.80e-10 | 3 |
gastrointestinal system mesentery | 1.80e-10 | 3 |
stomach region | 1.80e-10 | 3 |
mesentery | 1.80e-10 | 3 |
gastrointestinal system serosa | 1.80e-10 | 3 |
mesentery of stomach | 1.80e-10 | 3 |
gut mesentery | 1.80e-10 | 3 |
dorsal mesentery | 1.80e-10 | 3 |
dorsal mesogastrium | 1.80e-10 | 3 |
peritoneal cavity | 1.80e-10 | 3 |
spleen primordium | 1.80e-10 | 3 |
lateral plate mesoderm | 3.12e-08 | 203 |
connective tissue | 7.75e-08 | 371 |
hemopoietic organ | 9.84e-08 | 7 |
immune organ | 9.84e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.84e-28 | 31 |
leukemia | 5.85e-27 | 39 |
hematologic cancer | 9.99e-22 | 51 |
immune system cancer | 9.99e-22 | 51 |