FFCP PHASE1:Hg19::chr8:141370177..141370224,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:141370177..141370224,- | |||
|coexpression_cluster_id=C302 | |||
|description=CAGE_peak_at_chr8:141370177..141370224,- | |description=CAGE_peak_at_chr8:141370177..141370224,- | ||
|id=chr8:141370177..141370224,- | |id=chr8:141370177..141370224,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002602;8.91e-17;2!CL:0000135;9.82e-12;3!CL:0000388;9.82e-12;3!CL:0000228;3.00e-09;1!CL:0002372;3.00e-09;1!CL:0000056;7.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,4.32e-17,2;CL:0000135,9.83e-12,3;CL:0000388,9.83e-12,3;CL:0000228,2.55e-09,1;CL:0002372,2.55e-09,1;CL:0000515,9.25e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.00e-09;1!CL:0000515;7.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;8.91e-17;2!UBERON:0001995;8.91e-17;2!UBERON:0004715;8.91e-17;2!UBERON:0007846;9.82e-12;3!UBERON:0000043;9.82e-12;3!UBERON:0007845;9.82e-12;3!UBERON:0002418;1.68e-11;3!UBERON:0004755;1.68e-11;3!UBERON:0004905;1.85e-09;8!UBERON:0000982;1.85e-09;8!UBERON:0004770;1.85e-09;8!UBERON:0000941;3.00e-09;1!UBERON:0007195;3.00e-09;1!UBERON:0001785;3.00e-09;1!UBERON:0002464;3.00e-09;1!UBERON:0004904;3.00e-09;1!UBERON:0001021;3.00e-09;1!UBERON:0002346;4.15e-09;4!UBERON:0000923;4.15e-09;4!UBERON:0010316;4.15e-09;4!UBERON:0005291;4.15e-09;4!UBERON:0002204;1.01e-07;70!UBERON:0004765;1.63e-07;26!UBERON:0002050;1.88e-07;5!UBERON:0005423;1.88e-07;5!UBERON:0011135;3.03e-07;5!UBERON:0002216;3.03e-07;5!UBERON:0011134;3.03e-07;5!UBERON:0002209;3.03e-07;5!UBERON:0002213;3.03e-07;5!UBERON:0007844;3.03e-07;5!UBERON:0011138;3.03e-07;5!UBERON:0001130;3.03e-07;5!UBERON:0001066;3.03e-07;5!UBERON:0001468;3.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,4.32e-17,2;UBERON:0001995,4.32e-17,2;UBERON:0004715,4.32e-17,2;UBERON:0007846,9.83e-12,3;UBERON:0000043,9.83e-12,3;UBERON:0007845,9.83e-12,3;UBERON:0002418,1.04e-11,3;UBERON:0004755,1.04e-11,3;UBERON:0004905,1.26e-09,8;UBERON:0000982,1.26e-09,8;UBERON:0004770,1.26e-09,8;UBERON:0000941,2.35e-09,1;UBERON:0001785,2.35e-09,1;UBERON:0002464,2.35e-09,1;UBERON:0004904,2.35e-09,1;UBERON:0001021,2.35e-09,1;UBERON:0003902,2.35e-09,1;UBERON:0005425,2.35e-09,1;UBERON:0007195,4.15e-09,1;UBERON:0011135,2.28e-07,5;UBERON:0002216,2.28e-07,5;UBERON:0011134,2.28e-07,5;UBERON:0002209,2.28e-07,5;UBERON:0002213,2.28e-07,5;UBERON:0005856,2.28e-07,5;UBERON:0005866,2.28e-07,5;UBERON:0005863,2.28e-07,5;UBERON:0007844,2.28e-07,5;UBERON:0011138,2.28e-07,5;UBERON:0001130,2.28e-07,5;UBERON:0001066,2.28e-07,5;UBERON:0001468,2.28e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,1.36142988256051,1.98838425436749,0,0.602694528023977,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0.142169232487422,0.293600439334847,0,0.601633342410425,0,0,0.32389366601898,0,0,0,0.242584061187816,0,0,0.309706370895104,0.863077176966451,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.580418477257168,0,0,0.251248665256743,0,0,0,0,0,0.422510572623884,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0.443067789167242,0.270803863765016,0,0,0.164437904603676,0,0,0,0,1.04535523804977,0.113309342697566,0.383220493601921,0.34362744548263,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.417989933073621,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0.441175890929576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,1.02738161275192,0,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0.167516265334349,0,0.749007023947182,2.99161459204025,0.414415513436035,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0.34444334449382,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0.650060246036521,0,0.290012154876366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,1.05650146756755,0.136499911407986,1.69686518344455,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0.0982490410131212,0,0,1.47775344708365,0.329294892959902,0.379473173765715,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0.199579371432817,0,0,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0,0,37.4744689167487,0.343505344755765,0,0,0,86.7523143585059,0,0,0,0,0,0.18714054040822,0.439524537815682,0,0,0,0.23874448473769,0,0.307160702099232,0,0.281338832821026,0,0,0.211125408127993,0,0,0,0,0,0,0,0,1.02314474045374,0.197286811273867,0,1.11136990144637,0,0,0,0.260427761085233,0,0,0,0,0,0,10.4977660817972,0,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0.421996129056054,0,0,0.649165919226273,0,0.0884575645033392,0,0,0.123563938946503,0,0.067401132980677,0,0.468528891450678,0.364909578431332,0,0,0.394584402849391,0,0,0.126373159256976,0,0.311064574191741,0,0.330991955875499,0,0,0,0.138674673013139,0.520679215005393,0.0979923974143777,0,0.52418000472609,0,0,0.146178634172371,0.246346371159628,0.0969890164884194,0.0882561266915003,0,0,0.397429223405979,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0.279282401272254,0,0,0,0.429226048136571,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.242998226632099,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,0.979762080328227,0,0.082092520749339,0,0.453248366080503,0,0,0.129282956361551,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.3755727921195,0,0.110929051536852,0.124192805882767,0.276697269872462,0,0,0,0.235265819698172,0.468334905806882,0.144921028610825,0,0,0,1.13641803165053,2.0125432140206,0.889811221596536,0,0,0.15543720058278,0,0,0,0,0,0.53168342911599,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0,0,0.303859956177382,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,1.69732529954025,0.425149840203366,0.123935764259002,0.558644917973244,0,0.0788617450012534,0,0,0.3062454773532,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0,0.161475645631851,1.42769420259154,0,0.11796972334774,0,0,0,0,0.596748666348824,0.150420656698515,0,0.781514011233092,0,0,0,0,0,0.206686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| ||
|short_description=p@chr8:141370177..141370224,- | |short_description=p@chr8:141370177..141370224,- | ||
}} | }} |
Latest revision as of 15:37, 31 July 2015
Short description: | p@chr8:141370177..141370224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:141370177..141370224, - |
Coexpression cluster: | C302_acute_peripheral_Neutrophils_NK_myelodysplastic_CD34_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 4.32e-17 | 2 |
fibrocyte | 9.83e-12 | 3 |
tendon cell | 9.83e-12 | 3 |
multinucleate cell | 2.55e-09 | 1 |
myotube | 2.55e-09 | 1 |
skeletal muscle myoblast | 9.25e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 4.32e-17 | 2 |
fibrocartilage | 4.32e-17 | 2 |
annulus fibrosus disci intervertebralis | 4.32e-17 | 2 |
dense regular connective tissue | 9.83e-12 | 3 |
tendon | 9.83e-12 | 3 |
regular connective tissue | 9.83e-12 | 3 |
cartilage tissue | 1.04e-11 | 3 |
skeletal tissue | 1.04e-11 | 3 |
articulation | 1.26e-09 | 8 |
skeletal joint | 1.26e-09 | 8 |
articular system | 1.26e-09 | 8 |
cranial nerve II | 2.35e-09 | 1 |
cranial nerve | 2.35e-09 | 1 |
nerve trunk | 2.35e-09 | 1 |
nerve connecting eye with brain | 2.35e-09 | 1 |
nerve | 2.35e-09 | 1 |
retinal neural layer | 2.35e-09 | 1 |
presumptive neural retina | 2.35e-09 | 1 |
stroma of bone marrow | 4.15e-09 | 1 |
intervertebral cartilage | 2.28e-07 | 5 |
symphysis | 2.28e-07 | 5 |
nonsynovial joint | 2.28e-07 | 5 |
fibrous joint | 2.28e-07 | 5 |
cartilaginous joint | 2.28e-07 | 5 |
developing mesenchymal condensation | 2.28e-07 | 5 |
pre-cartilage condensation | 2.28e-07 | 5 |
cartilaginous condensation | 2.28e-07 | 5 |
cartilage element | 2.28e-07 | 5 |
post-cranial axial skeletal system | 2.28e-07 | 5 |
vertebral column | 2.28e-07 | 5 |
intervertebral disk | 2.28e-07 | 5 |
intervertebral joint | 2.28e-07 | 5 |