FFCP PHASE1:Hg19::chr8:23702223..23702240,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:23702223..23702240,- to FFCP PHASE1:Hg19::chr8:23702223..23702240,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:23702223..23702240,- | |||
|coexpression_cluster_id=C960 | |||
|description=CAGE_peak_at_chr8:23702223..23702240,- | |||
|id=chr8:23702223..23702240,- | |||
|ontology_enrichment_celltype=CL:0000055!3.64e-17!180;CL:0000359!6.42e-14!32;CL:0000680!4.32e-12!57;CL:0000056!4.32e-12!57;CL:0000355!4.32e-12!57;CL:0000192!1.25e-11!42;CL:0000514!1.25e-11!42;CL:0000393!1.49e-11!60;CL:0000211!1.49e-11!60;CL:0000187!5.54e-11!54;CL:0000183!1.95e-10!59;CL:0002539!3.19e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.99e-13;32!CL:0002595;1.36e-08;5!CL:0000192;6.53e-08;43!CL:0000048;6.83e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.92e-13,32;CL:0000192,2.97e-10,43;CL:0000514,2.97e-10,43;CL:0002595,1.85e-08,5;CL:0000187,3.06e-08,55;CL:0000393,5.20e-08,61;CL:0000211,5.20e-08,61;CL:0000680,1.31e-07,58;CL:0000056,1.31e-07,58;CL:0000355,1.31e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.53e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!2.38e-13!14;DOID:120!1.01e-09!27;DOID:193!1.52e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.69e-24;14!DOID:120;2.96e-13;27!DOID:193;4.13e-12;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.07e-24,14;DOID:120,3.83e-13,27;DOID:193,5.22e-12,29 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.96e-12!42;UBERON:0003509!6.96e-12!42;UBERON:0004572!6.96e-12!42;UBERON:0004290!2.53e-11!70;UBERON:0000914!3.43e-11!83;UBERON:0002329!3.43e-11!83;UBERON:0003077!3.43e-11!83;UBERON:0003059!3.43e-11!83;UBERON:0007282!3.43e-11!83;UBERON:0009618!3.43e-11!83;UBERON:0007285!3.43e-11!83;UBERON:0002385!5.76e-11!63;UBERON:0001015!5.76e-11!63;UBERON:0000383!5.76e-11!63;UBERON:0001134!1.93e-10!61;UBERON:0002036!1.93e-10!61;UBERON:0003082!1.93e-10!61;UBERON:0004573!5.30e-10!33;UBERON:0004571!5.30e-10!33;UBERON:0000486!7.94e-10!82;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0001981!1.62e-08!60;UBERON:0007500!1.62e-08!60;UBERON:0004537!1.62e-08!60;UBERON:0006965!1.62e-08!60;UBERON:0000055!3.01e-08!69;UBERON:0004237!3.19e-08!10;UBERON:0004695!3.19e-08!10;UBERON:0002111!3.19e-08!10;UBERON:0004178!3.19e-08!10;UBERON:0000992!6.70e-08!13;UBERON:0004872!8.57e-08!84;UBERON:0003134!1.12e-07!37;UBERON:0000474!1.12e-07!37;UBERON:0005156!4.11e-07!59;UBERON:0000990!4.11e-07!59;UBERON:0001135!6.25e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;8.39e-15;13!UBERON:0002119;4.00e-11;4!UBERON:0000991;1.85e-10;21!UBERON:0004573;3.25e-09;33!UBERON:0004571;3.25e-09;33!UBERON:0002118;8.31e-09;5!UBERON:0003834;1.36e-08;5!UBERON:0001533;1.36e-08;5!UBERON:0003134;2.08e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.27e-14,13;UBERON:0002119,4.64e-11,4;UBERON:0000991,2.45e-10,21;UBERON:0009196,2.45e-10,21;UBERON:0009117,2.45e-10,21;UBERON:0005564,2.45e-10,21;UBERON:0004176,9.15e-10,22;UBERON:0004573,2.16e-09,33;UBERON:0004571,2.16e-09,33;UBERON:0001637,3.14e-09,42;UBERON:0003509,3.14e-09,42;UBERON:0004572,3.14e-09,42;UBERON:0002118,8.28e-09,5;UBERON:0003834,1.85e-08,5;UBERON:0001533,1.85e-08,5;UBERON:0003134,2.32e-08,37;UBERON:0000474,2.32e-08,37;UBERON:0003133,5.27e-08,48;UBERON:0002329,2.03e-07,71;UBERON:0003059,2.03e-07,71;UBERON:0007282,2.03e-07,71;UBERON:0004290,2.03e-07,71;UBERON:0009618,2.03e-07,71;UBERON:0003100,2.95e-07,41;UBERON:0003077,2.96e-07,72;UBERON:0007285,2.96e-07,72;UBERON:0007524,4.27e-07,73;UBERON:0001134,7.15e-07,62;UBERON:0002036,7.15e-07,62;UBERON:0003082,7.15e-07,62;UBERON:0005156,9.58e-07,59;UBERON:0000990,9.58e-07,59 | |||
|phase1_expression=0.181678379270557,3.21150785836475,0.704772020479856,3.00219895059391,0,6.10636966870258,0,0.631719873426831,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0.672325146451775,1.20538905604795,0.730310090387373,2.43966399395253,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.722878304769133,0.50133791063589,2.89693037921647,0,1.94653948121054,0.189069634328136,0.443458794925128,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.417989933073621,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0.576175924479999,0,4.05808099879417,0.570471821544449,8.36912611090086,0,0.323745888736263,0,2.65400422631361,0.122834317311768,1.03325781175765,0,1.7308685049499,0,0,0.336672227908132,0.750711119231785,0.831192346452549,0,0,3.75595147266492,0.113432183160021,0,0,0.635795703478686,0.600182192168805,0.103052529238439,0.515281080091258,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0,0.272746120590835,0,0,0,0.580969714347592,0.10366105501537,0,1.09493207722749,0,0.643240938192885,0,6.50115099244771,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.245976877086227,0.857839051492628,0.109750285408626,0,0,0,0,0,2.88662684050547,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698476837213859,1.14596527667483,0,0,0,0,0,0.448524337381443,0.87192013766656,3.6669142910475,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.714889968290738,0,0,0.65147236858747,1.42156779497018,0,0,0,0,0,0,0,0,0,1.42636905040718,0.579125226670317,0.61642896765115,0.179060963239896,0,0,0,0,1.77866236955724,0,0,0.167516265334349,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,1.03985430765404,0.535286966391485,0,0.234282829985426,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0.640695746278505,0,0,1.48418066444991,4.00945203886904,1.59805552781814,0.9033987161519,9.34657972530518,1.97557643381931,0,0,0,0.229628896329213,1.0925470080403,0.393373244878272,0,0.231046011313244,0,0,0,0,0.510281115829547,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.21367859688319,0,0.308097234229289,0.15350367472613,0.689182862422653,0,0,0.596586391912706,0,0.165284915360978,0,0,0,0.929691098594572,5.35180989612088,1.3940745403212,0.616067160352178,0.532306030317022,1.73986598415015,2.03856641014312,0.286249773483982,0,0,0.190630193923825,0,0,0.95460974377781,1.56989728039846,0,0,0.117812402345686,0,1.58510321173008,2.10629228119491,0,5.36169677188826,1.05650146756755,0.818999468447914,0.141405431953713,2.26016233240486,0,3.3171948762061,7.0152141640602,0,0,0.202910376962704,0.92947049429925,1.40847801266121,0.143411352204052,0,0.35667105148125,1.41904425628239,0.422215270595328,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,3.81991175580304,0.296964680832639,1.84296421259539,0,0.140669416410513,1.44701316529778,0,0,0.597743964753209,0,0,0,0,1.55519793830904,0,0,0,0.394573622547734,0,1.11136990144637,0,0,0,1.04171104434093,0.0874599999961957,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0.227884111694002,0,0,0,3.50901275705111,0,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,2.77495773870551,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0,0,1.65495977937749,0.313932918407225,0,0.284609546029793,0.693373365065693,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0.959293472527256,2.18586072873289,0,0,0,0,0,0.144090417154106,0,0,7.63490429337193,0.49701014226173,0.235694034616795,0.135904206073614,0.209205692624666,0.203996435272644,0,0,0,0,0,0,0.279282401272254,0,1.43574604915363,0,0,0,0.0671834724867263,2.16179930125442,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,1.28602518772015,0.275078873194468,0.415440338029185,0,0,0,0,0.472834243795189,0.157363764404994,0.105600336519406,1.07572403599707,0,0,0,0,0.542999601753713,1.72844298240254,2.61269888087527,0,0.164185041498678,0,0.679872549120754,0,0,0,0.66116300871345,0.171086837884329,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.250381861413,0,0.332787154610557,0,0.138348634936231,0.124980407962107,0,1.14186133417987,0.470531639396343,0.468334905806882,0,0.74627401443437,0,1.66441758450784,0.947015026375446,1.0062716070103,0.889811221596536,0.457680136793847,0.302461847526478,0.777186002913902,6.65348174953353,6.05327715222069,4.04822800947244,2.17368139626763,5.80588690977198,2.39257543102195,4.17396049449387,0.90154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| ||
|short_description=p@chr8:23702223..23702240,- | |||
}} | }} |
Latest revision as of 17:12, 31 July 2015
Short description: | p@chr8:23702223..23702240, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23702223..23702240, - |
Coexpression cluster: | C960_Preadipocyte_giant_Smooth_Fibroblast_fibrous_mesenchymal_Meningeal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.92e-13 | 32 |
smooth muscle cell | 2.97e-10 | 43 |
smooth muscle myoblast | 2.97e-10 | 43 |
smooth muscle cell of the subclavian artery | 1.85e-08 | 5 |
muscle cell | 3.06e-08 | 55 |
electrically responsive cell | 5.20e-08 | 61 |
electrically active cell | 5.20e-08 | 61 |
muscle precursor cell | 1.31e-07 | 58 |
myoblast | 1.31e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.27e-14 | 13 |
left ovary | 4.64e-11 | 4 |
gonad | 2.45e-10 | 21 |
indifferent external genitalia | 2.45e-10 | 21 |
indifferent gonad | 2.45e-10 | 21 |
gonad primordium | 2.45e-10 | 21 |
external genitalia | 9.15e-10 | 22 |
systemic artery | 2.16e-09 | 33 |
systemic arterial system | 2.16e-09 | 33 |
artery | 3.14e-09 | 42 |
arterial blood vessel | 3.14e-09 | 42 |
arterial system | 3.14e-09 | 42 |
right ovary | 8.28e-09 | 5 |
thoracic segment blood vessel | 1.85e-08 | 5 |
subclavian artery | 1.85e-08 | 5 |
female reproductive organ | 2.32e-08 | 37 |
female reproductive system | 2.32e-08 | 37 |
reproductive organ | 5.27e-08 | 48 |
somite | 2.03e-07 | 71 |
presomitic mesoderm | 2.03e-07 | 71 |
presumptive segmental plate | 2.03e-07 | 71 |
dermomyotome | 2.03e-07 | 71 |
trunk paraxial mesoderm | 2.03e-07 | 71 |
female organism | 2.95e-07 | 41 |
paraxial mesoderm | 2.96e-07 | 72 |
presumptive paraxial mesoderm | 2.96e-07 | 72 |
dense mesenchyme tissue | 4.27e-07 | 73 |
skeletal muscle tissue | 7.15e-07 | 62 |
striated muscle tissue | 7.15e-07 | 62 |
myotome | 7.15e-07 | 62 |
reproductive structure | 9.58e-07 | 59 |
reproductive system | 9.58e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.07e-24 | 14 |
female reproductive organ cancer | 3.83e-13 | 27 |
reproductive organ cancer | 5.22e-12 | 29 |