FFCP PHASE1:Hg19::chr8:33579896..33579943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:33579896..33579943,+ | |||
|description=CAGE_peak_at_chr8:33579896..33579943,+ | |||
|id=chr8:33579896..33579943,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000415;3.27e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,3.06e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;6.28e-10;2!DOID:4236;6.28e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.75e-10,2;DOID:4236,5.75e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.97e-28!57;UBERON:0005068!1.97e-28!57;UBERON:0006241!1.97e-28!57;UBERON:0007135!1.97e-28!57;UBERON:0001017!2.99e-28!82;UBERON:0005743!7.71e-28!86;UBERON:0000955!1.37e-26!69;UBERON:0006238!1.37e-26!69;UBERON:0001893!1.18e-25!34;UBERON:0002020!1.40e-25!34;UBERON:0003528!1.40e-25!34;UBERON:0002791!2.76e-24!33;UBERON:0002780!2.92e-24!41;UBERON:0001890!2.92e-24!41;UBERON:0006240!2.92e-24!41;UBERON:0000073!4.38e-24!94;UBERON:0001016!4.38e-24!94;UBERON:0002616!1.12e-23!59;UBERON:0003080!1.63e-23!42;UBERON:0001869!3.37e-23!32;UBERON:0003075!2.20e-19!86;UBERON:0007284!2.20e-19!86;UBERON:0002619!2.87e-18!22;UBERON:0007023!3.09e-18!115;UBERON:0002346!4.55e-18!90;UBERON:0000956!1.23e-15!25;UBERON:0000203!1.23e-15!25;UBERON:0003056!3.44e-15!61;UBERON:0001950!3.97e-15!20;UBERON:0002420!5.12e-13!9;UBERON:0007245!5.12e-13!9;UBERON:0010009!5.12e-13!9;UBERON:0010011!5.12e-13!9;UBERON:0000454!5.12e-13!9;UBERON:0000033!2.52e-12!123;UBERON:0002308!3.52e-12!9;UBERON:0000125!3.52e-12!9;UBERON:0000153!2.70e-11!129;UBERON:0007811!2.70e-11!129;UBERON:0000349!1.23e-10!5;UBERON:0009663!1.80e-09!7;UBERON:0004121!3.38e-09!169;UBERON:0001871!8.22e-09!7;UBERON:0000924!9.49e-09!173;UBERON:0006601!9.49e-09!173;UBERON:0000200!6.13e-08!6;UBERON:0002298!2.53e-07!8;UBERON:0002771!9.78e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000349;4.63e-14;5!UBERON:0002619;1.93e-13;22!UBERON:0000956;1.04e-11;25!UBERON:0000203;1.04e-11;25!UBERON:0002791;4.74e-10;32!UBERON:0001876;1.25e-09;2!UBERON:0001954;1.25e-09;2!UBERON:0003022;1.25e-09;2!UBERON:0002421;1.25e-09;2!UBERON:0002600;1.25e-09;2!UBERON:0001869;1.30e-09;32!UBERON:0003528;1.36e-09;34!UBERON:0002020;1.36e-09;34!UBERON:0001950;5.07e-09;20!UBERON:0002780;8.89e-09;41!UBERON:0001890;8.89e-09;41!UBERON:0001893;1.58e-08;34!UBERON:0002110;4.52e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,3.17e-14,5;UBERON:0002619,1.80e-13,22;UBERON:0000956,9.74e-12,25;UBERON:0000203,9.74e-12,25;UBERON:0002791,5.15e-11,32;UBERON:0001869,5.15e-11,32;UBERON:0003528,2.79e-10,34;UBERON:0002020,2.79e-10,34;UBERON:0001893,2.79e-10,34;UBERON:0002780,4.55e-10,41;UBERON:0001890,4.55e-10,41;UBERON:0003080,4.55e-10,41;UBERON:0006240,4.55e-10,41;UBERON:0001876,9.39e-10,2;UBERON:0001954,1.03e-09,2;UBERON:0003022,1.03e-09,2;UBERON:0002421,1.03e-09,2;UBERON:0002600,1.03e-09,2;UBERON:0001950,5.08e-09,20;UBERON:0000955,5.69e-09,68;UBERON:0006238,5.69e-09,68;UBERON:0001017,2.36e-08,81;UBERON:0000073,2.25e-07,53;UBERON:0002616,2.25e-07,53;UBERON:0001016,3.09e-07,89;UBERON:0002110,4.33e-07,3;UBERON:0006242,4.33e-07,3;UBERON:0001049,7.00e-07,56;UBERON:0005068,7.00e-07,56;UBERON:0006241,7.00e-07,56;UBERON:0007135,7.00e-07,56 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,1.11389717664042,0.662794751455832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.981531933753119,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.06648799129817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.748562161632879,0,0,9.58413104786314,0,0,0,0,1.9882952955326,3.37606599385231,0.445234820091624,0,0,0,0,0,5.4202401726142,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,2.06846023944879,0,4.5142498682656,0,0.964771509003264,0,0.663475559587348,0,4.38770794307945,11.438538669494,0,0,1.36730467016401,0.69169171316418,0,0,0.31900115973192,0,0,0,0,0,0.451191321234361,0.784250137270958,0.671286347903371,3.41556718903533,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0.693373365065693,0,0,0,0,0,0,0,0,0,0,0,12.1967312935608,1.39100228192093,1.26621591911757,4.69323318563527,7.53492910364417,0,9.99048047910651,0,0,1.02956998717179,0,0,0,0.135904206073614,0,0,1.44475294950759,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0,0,0,1.16495949527454,0,0,0,0.78741985211799,0,1.59045937961861,3.40508515278939,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94044099596827,0,6.91203758272767,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,13.8328142328561,0,0,0,0,0,0,0,0,0.732157589411779,1.1267183763585,0.573409195690071,0.665574309221114,0,0,8.12372651753693,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,8.83294287600557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,2.6208787907713,4.17813944881323,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.834979926253974,0,0.478901577171454,0.615349092722265,0,0.345786262321089,1.77623210195036,0,0,0,0,0,0.762764190934334,0,12.1338895490928,0,8.47161288554784,0,0,2.29280684514135,0,0.607838261565552,0,2.06686796501184,1.07806877329642,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0,0.271878931907327,0.394636641377094,0,0,0,0.942693539496011,0,0,0.215927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19370465096821,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.883889372481891,0,0,0.371995018166751,0,0,0,0.109265571963696,0,0,0,0,0,1.36401656792831,3.7514978221865,0,1.55149493792843,0,0,0,0,14.2407465477379,0.12729431655633,0,0,0,0,0,0,0,6.83055013617379,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr8:33579896..33579943,+ | |||
}} | }} |
Latest revision as of 18:02, 31 July 2015
Short description: | p@chr8:33579896..33579943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:33579896..33579943, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 3.06e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
limbic system | 3.17e-14 | 5 |
regional part of cerebral cortex | 1.80e-13 | 22 |
cerebral cortex | 9.74e-12 | 25 |
pallium | 9.74e-12 | 25 |
regional part of telencephalon | 5.15e-11 | 32 |
cerebral hemisphere | 5.15e-11 | 32 |
brain grey matter | 2.79e-10 | 34 |
gray matter | 2.79e-10 | 34 |
telencephalon | 2.79e-10 | 34 |
regional part of forebrain | 4.55e-10 | 41 |
forebrain | 4.55e-10 | 41 |
anterior neural tube | 4.55e-10 | 41 |
future forebrain | 4.55e-10 | 41 |
amygdala | 9.39e-10 | 2 |
Ammon's horn | 1.03e-09 | 2 |
lobe parts of cerebral cortex | 1.03e-09 | 2 |
hippocampal formation | 1.03e-09 | 2 |
limbic lobe | 1.03e-09 | 2 |
neocortex | 5.08e-09 | 20 |
brain | 5.69e-09 | 68 |
future brain | 5.69e-09 | 68 |
central nervous system | 2.36e-08 | 81 |
regional part of nervous system | 2.25e-07 | 53 |
regional part of brain | 2.25e-07 | 53 |
nervous system | 3.09e-07 | 89 |
gallbladder | 4.33e-07 | 3 |
gall bladder primordium | 4.33e-07 | 3 |
neural tube | 7.00e-07 | 56 |
neural rod | 7.00e-07 | 56 |
future spinal cord | 7.00e-07 | 56 |
neural keel | 7.00e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.75e-10 | 2 |
carcinosarcoma | 5.75e-10 | 2 |