FFCP PHASE1:Hg19::chr9:115950730..115950743,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:115950730..115950743,+ | |||
|coexpression_cluster_id=C4791 | |||
|description=CAGE_peak_at_chr9:115950730..115950743,+ | |||
|id=chr9:115950730..115950743,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.31e-29!42;CL:0000860!1.96e-26!45;CL:0000766!3.23e-24!76;CL:0000839!8.62e-23!70;CL:0000557!2.68e-22!71;CL:0002194!2.91e-22!63;CL:0000576!2.91e-22!63;CL:0000040!2.91e-22!63;CL:0000559!2.91e-22!63;CL:0002009!3.14e-21!65;CL:0000763!4.49e-14!112;CL:0000049!4.49e-14!112;CL:0000048!5.30e-13!430;CL:0000723!6.28e-13!436;CL:0000034!3.36e-12!444;CL:0000134!6.12e-12!358;CL:0002320!2.91e-11!365;CL:0000219!4.67e-11!390;CL:0000144!8.41e-09!625;CL:0000548!9.62e-09!679;CL:0000004!9.62e-09!679;CL:0000255!9.62e-09!679;CL:0002031!1.31e-08!124;CL:0000012!1.49e-08!682;CL:0000738!3.01e-08!140;CL:0002087!1.52e-07!119;CL:0000077!5.68e-07!19;CL:0002371!6.88e-07!591;CL:0000063!6.94e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.87e-69;33!CL:0002057;5.87e-69;33!CL:0000473;2.78e-52;39!CL:0000234;2.78e-52;39!CL:0000576;1.98e-31;48!CL:0000766;4.88e-22;69!CL:0002087;2.10e-09;104!CL:0000763;9.05e-09;100!CL:0002573;9.69e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.46e-58,42;CL:0002057,1.46e-58,42;CL:0000473,1.90e-55,48;CL:0000234,1.90e-55,48;CL:0002194,2.31e-43,59;CL:0000576,2.31e-43,59;CL:0000040,2.31e-43,59;CL:0000559,2.31e-43,59;CL:0002009,8.40e-42,61;CL:0000839,2.61e-38,66;CL:0000557,1.13e-37,67;CL:0000766,9.47e-35,72;CL:0000763,1.28e-21,108;CL:0000049,1.28e-21,108;CL:0002087,5.18e-20,115;CL:0002031,5.60e-19,120;CL:0000738,3.53e-16,136;CL:0002032,6.46e-13,161;CL:0000837,6.46e-13,161;CL:0000037,3.55e-12,168;CL:0000988,2.60e-11,177;CL:0000219,7.32e-10,386;CL:0000134,1.78e-09,354;CL:0002320,3.61e-09,361;CL:0002573,1.01e-08,2;CL:0000048,3.08e-08,427;CL:0000723,4.97e-08,433;CL:0000034,9.20e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.39e-44;42!CL:0000049;3.77e-07;108 | |||
|ontology_enrichment_disease=DOID:2394!2.72e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.14e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.18e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!2.92e-21!80;UBERON:0004765!3.16e-19!101;UBERON:0001434!3.16e-19!101;UBERON:0001474!6.79e-19!86;UBERON:0002204!3.91e-16!167;UBERON:0002390!5.76e-15!102;UBERON:0003061!5.76e-15!102;UBERON:0002193!1.49e-12!112;UBERON:0002405!7.79e-12!115;UBERON:0002384!9.44e-12!375;UBERON:0002118!1.28e-07!5;UBERON:0004532!1.28e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002118;4.11e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.05e-39,76;UBERON:0001474,5.09e-36,82;UBERON:0004765,2.21e-32,90;UBERON:0002405,3.54e-31,93;UBERON:0002390,2.48e-29,98;UBERON:0003061,2.48e-29,98;UBERON:0001434,1.21e-28,100;UBERON:0002193,3.78e-26,108;UBERON:0002204,4.69e-18,167;UBERON:0003081,3.17e-15,203;UBERON:0000926,2.11e-12,315;UBERON:0004120,2.11e-12,315;UBERON:0006603,2.11e-12,315;UBERON:0002118,4.25e-10,5;UBERON:0002384,9.51e-09,371 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,1.51150377475524,0.727752183563449,0.232429036905685,1.23350366406548,2.47765096716083,2.3015391385772,2.0492856522328,4.7296445977717,1.03423704220986,4.51839278508678,2.70852973188684,1.69418105588344,3.0019676506363,1.57306439111559,1.53041946185451,2.88836124368484,1.27867425159808,0.329851300186716,0.797854630486527,0.852449501065388,1.7412554317715,1.13477044938228,0,2.00998932205395,3.65038042894141,6.5156653411535,0.605399502633369,4.78760926783834,1.89877432464531,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,1.45650098894541,0.573673241497627,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0,0.179389635688862,0,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.702012795417713,0.445893486866185,0.93733833986777,0,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0,0.144119953416961,0,0,0,0,0,0,0.600686115687835,0,0.224262168690721,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,0,1.80863626235752,0,0,1.2162378064119,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0.460385919864187,0,0,0,0,0,0,0.532685175939381,0.328508624055237,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,1.15755106853338,0,0,0,0,0,0,0.35667105148125,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372757606696298,0,0.271808412147228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316801009558219,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,3.21985108967651,0,1.77962244319307,1.83072054717539,0.151230923763239,0,0,0.318593534327405,1.34940933649081,0.310525913752519,0,0,0,0.601030435988874,2.66563648518157,1.22061219961398,0.181848659202559,0.107410557042488,1.85613503951397,1.19428766609585,0,0.343395705182793,0,0,0,0.214441591374926,0.260994291965212,0,0,0.244736704506468,0.179088841081487,0.308801447160972,0.438568099157414,0.530067437837643,0.38582807654183,0.675769762612291,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0,0,0.567515953566836,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,4.73328002922261,4.4310970474762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:115950730..115950743,+ | |||
}} |
Latest revision as of 21:54, 31 July 2015
Short description: | p@chr9:115950730..115950743, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:115950730..115950743, + |
Coexpression cluster: | C4791_schwannoma_CD14_mesenchymal_Mast_Fibroblast_Mesothelial_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.46e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.46e-58 | 42 |
defensive cell | 1.90e-55 | 48 |
phagocyte | 1.90e-55 | 48 |
monopoietic cell | 2.31e-43 | 59 |
monocyte | 2.31e-43 | 59 |
monoblast | 2.31e-43 | 59 |
promonocyte | 2.31e-43 | 59 |
macrophage dendritic cell progenitor | 8.40e-42 | 61 |
myeloid lineage restricted progenitor cell | 2.61e-38 | 66 |
granulocyte monocyte progenitor cell | 1.13e-37 | 67 |
myeloid leukocyte | 9.47e-35 | 72 |
myeloid cell | 1.28e-21 | 108 |
common myeloid progenitor | 1.28e-21 | 108 |
nongranular leukocyte | 5.18e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 5.60e-19 | 120 |
leukocyte | 3.53e-16 | 136 |
hematopoietic oligopotent progenitor cell | 6.46e-13 | 161 |
hematopoietic multipotent progenitor cell | 6.46e-13 | 161 |
hematopoietic stem cell | 3.55e-12 | 168 |
hematopoietic cell | 2.60e-11 | 177 |
motile cell | 7.32e-10 | 386 |
mesenchymal cell | 1.78e-09 | 354 |
connective tissue cell | 3.61e-09 | 361 |
Schwann cell | 1.01e-08 | 2 |
multi fate stem cell | 3.08e-08 | 427 |
somatic stem cell | 4.97e-08 | 433 |
stem cell | 9.20e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.05e-39 | 76 |
bone element | 5.09e-36 | 82 |
skeletal element | 2.21e-32 | 90 |
immune system | 3.54e-31 | 93 |
hematopoietic system | 2.48e-29 | 98 |
blood island | 2.48e-29 | 98 |
skeletal system | 1.21e-28 | 100 |
hemolymphoid system | 3.78e-26 | 108 |
musculoskeletal system | 4.69e-18 | 167 |
lateral plate mesoderm | 3.17e-15 | 203 |
mesoderm | 2.11e-12 | 315 |
mesoderm-derived structure | 2.11e-12 | 315 |
presumptive mesoderm | 2.11e-12 | 315 |
right ovary | 4.25e-10 | 5 |
connective tissue | 9.51e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.18e-09 | 14 |