FFCP PHASE1:Hg19::chr9:132536258..132536280,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:132536258..132536280,+ | |||
|coexpression_cluster_id=C2069 | |||
|description=CAGE_peak_at_chr9:132536258..132536280,+ | |description=CAGE_peak_at_chr9:132536258..132536280,+ | ||
|id=chr9:132536258..132536280,+ | |id=chr9:132536258..132536280,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.26e-83!45;CL:0002057!1.48e-81!42;CL:0000766!4.65e-68!76;CL:0002194!1.38e-58!63;CL:0000576!1.38e-58!63;CL:0000040!1.38e-58!63;CL:0000559!1.38e-58!63;CL:0002009!1.84e-56!65;CL:0000557!9.95e-54!71;CL:0000839!1.12e-51!70;CL:0000738!6.79e-48!140;CL:0000763!2.15e-44!112;CL:0000049!2.15e-44!112;CL:0002087!2.34e-40!119;CL:0000037!4.98e-38!172;CL:0000566!4.98e-38!172;CL:0000988!3.79e-35!182;CL:0002032!3.30e-33!165;CL:0000837!3.30e-33!165;CL:0002031!2.54e-32!124;CL:0002393!1.13e-24!9;CL:0002397!1.13e-24!9;CL:0000094!5.23e-17!8;CL:0000134!8.97e-17!358;CL:0002320!3.73e-16!365;CL:0000219!5.62e-14!390;CL:0000048!9.60e-13!430;CL:0000034!1.49e-12!444;CL:0000723!2.37e-12!436;CL:0000081!4.94e-12!11;CL:0000842!8.50e-10!3;CL:0000875!5.43e-09!3;CL:0002396!5.43e-09!3;CL:0000767!9.79e-09!3;CL:0000623!4.19e-08!3;CL:0000825!4.19e-08!3;CL:0000063!1.72e-07!578;CL:0000224!2.04e-07!4;CL:0000771!3.67e-07!2 | |ontology_enrichment_celltype=CL:0000860!1.26e-83!45;CL:0002057!1.48e-81!42;CL:0000766!4.65e-68!76;CL:0002194!1.38e-58!63;CL:0000576!1.38e-58!63;CL:0000040!1.38e-58!63;CL:0000559!1.38e-58!63;CL:0002009!1.84e-56!65;CL:0000557!9.95e-54!71;CL:0000839!1.12e-51!70;CL:0000738!6.79e-48!140;CL:0000763!2.15e-44!112;CL:0000049!2.15e-44!112;CL:0002087!2.34e-40!119;CL:0000037!4.98e-38!172;CL:0000566!4.98e-38!172;CL:0000988!3.79e-35!182;CL:0002032!3.30e-33!165;CL:0000837!3.30e-33!165;CL:0002031!2.54e-32!124;CL:0002393!1.13e-24!9;CL:0002397!1.13e-24!9;CL:0000094!5.23e-17!8;CL:0000134!8.97e-17!358;CL:0002320!3.73e-16!365;CL:0000219!5.62e-14!390;CL:0000048!9.60e-13!430;CL:0000034!1.49e-12!444;CL:0000723!2.37e-12!436;CL:0000081!4.94e-12!11;CL:0000842!8.50e-10!3;CL:0000875!5.43e-09!3;CL:0002396!5.43e-09!3;CL:0000767!9.79e-09!3;CL:0000623!4.19e-08!3;CL:0000825!4.19e-08!3;CL:0000063!1.72e-07!578;CL:0000224!2.04e-07!4;CL:0000771!3.67e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.79e-34;48!CL:0000860;4.85e-34;33!CL:0002057;4.85e-34;33!CL:0000766;1.75e-33;69!CL:0002393;5.82e-27;6!CL:0002397;5.82e-27;6!CL:0000473;2.29e-25;39!CL:0000234;2.29e-25;39!CL:0000226;2.95e-20;3!CL:0000842;2.95e-20;3!CL:0000094;3.52e-20;8!CL:0000875;1.08e-18;3!CL:0002396;1.08e-18;3!CL:0000081;1.26e-14;11!CL:0002087;1.71e-14;104!CL:0000771;2.53e-14;2!CL:0000763;1.65e-13;100!CL:0000738;1.72e-10;136!CL:0000775;9.13e-10;3!CL:0002032;2.31e-07;1!CL:0000557;2.31e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.18e-73,42;CL:0002057,1.18e-73,42;CL:0000473,6.79e-64,48;CL:0000234,6.79e-64,48;CL:0000766,3.20e-62,72;CL:0002194,3.17e-50,59;CL:0000576,3.17e-50,59;CL:0000040,3.17e-50,59;CL:0000559,3.17e-50,59;CL:0002009,1.84e-48,61;CL:0000557,7.62e-48,67;CL:0000839,1.64e-44,66;CL:0002393,1.97e-43,9;CL:0002397,1.97e-43,9;CL:0000763,3.84e-43,108;CL:0000049,3.84e-43,108;CL:0000738,5.80e-39,136;CL:0000037,7.32e-33,168;CL:0002087,1.56e-31,115;CL:0000988,6.20e-31,177;CL:0002032,2.43e-27,161;CL:0000837,2.43e-27,161;CL:0002031,1.28e-22,120;CL:0000226,2.59e-20,3;CL:0000842,2.59e-20,3;CL:0000094,2.89e-20,8;CL:0000875,1.77e-18,3;CL:0002396,1.77e-18,3;CL:0000081,1.09e-14,11;CL:0000771,2.53e-14,2;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000775,9.14e-10,3;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;3.32e-46;42!CL:0000049;3.29e-11;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.52e-49!102;UBERON:0003061!3.52e-49!102;UBERON:0002371!6.65e-49!80;UBERON:0001474!5.56e-47!86;UBERON:0002193!1.15e-43!112;UBERON:0004765!2.65e-38!101;UBERON:0001434!2.65e-38!101;UBERON:0002405!6.02e-34!115;UBERON:0002204!6.02e-21!167;UBERON:0003081!1.21e-20!216;UBERON:0002384!2.60e-15!375;UBERON:0000926!4.57e-07!448;UBERON:0004120!4.57e-07!448;UBERON:0006603!4.57e-07!448 | |ontology_enrichment_uberon=UBERON:0002390!3.52e-49!102;UBERON:0003061!3.52e-49!102;UBERON:0002371!6.65e-49!80;UBERON:0001474!5.56e-47!86;UBERON:0002193!1.15e-43!112;UBERON:0004765!2.65e-38!101;UBERON:0001434!2.65e-38!101;UBERON:0002405!6.02e-34!115;UBERON:0002204!6.02e-21!167;UBERON:0003081!1.21e-20!216;UBERON:0002384!2.60e-15!375;UBERON:0000926!4.57e-07!448;UBERON:0004120!4.57e-07!448;UBERON:0006603!4.57e-07!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.03e-41,76;UBERON:0002390,5.89e-41,98;UBERON:0003061,5.89e-41,98;UBERON:0001474,2.31e-38,82;UBERON:0002193,9.65e-37,108;UBERON:0004765,1.40e-34,90;UBERON:0002405,2.50e-33,93;UBERON:0001434,1.08e-30,100;UBERON:0003081,2.87e-17,203;UBERON:0002204,1.43e-16,167;UBERON:0002384,5.75e-12,371;UBERON:0000926,2.64e-09,315;UBERON:0004120,2.64e-09,315;UBERON:0006603,2.64e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.85779347979291,0,0,0,0,0,0,4.43196326825502,23.4637003540066,11.718587018656,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.697287110717054,0.822335776043652,0.619412741790207,0.28769239232215,0,0.236482229888585,3.10271112662957,2.5819387343353,4.06279459783025,0.941211697713023,0.272906150057846,1.34834090667051,2.44867113896722,1.28371610830437,3.19668562899521,0,0,0,3.48251086354301,1.70215567407342,4.9825779919646,0.502497330513487,0,0.868755378820466,0.605399502633369,1.84138817993782,2.53169909952708,2.11255286311942,4.46469029926591,0.838634582033504,2.13424399178341,1.35159203557356,1.76798145366788,1.14005097496499,1.19350006319454,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,14.2311334549965,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,15.747136659759,7.04401881502733,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.85779347979291,0,0,0,0,0,0,4.43196326825502,23.4637003540066,11.718587018656,0,0,0,0.436194716338694,0.755751887377619,0.727752183563449,0.697287110717054,0.822335776043652,0.619412741790207,0.28769239232215,0,0.236482229888585,3.10271112662957,2.5819387343353,4.06279459783025,0.941211697713023,0.272906150057846,1.34834090667051,2.44867113896722,1.28371610830437,3.19668562899521,0,0,0,3.48251086354301,1.70215567407342,4.9825779919646,0.502497330513487,0,0.868755378820466,0.605399502633369,1.84138817993782,2.53169909952708,2.11255286311942,4.46469029926591,0.838634582033504,2.13424399178341,1.35159203557356,1.76798145366788,1.14005097496499,1.19350006319454,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0.641715181398742,0,0,0,0,0,14.2311334549965,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,15.747136659759,7.04401881502733,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0.19351266257817,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0,0,0,0.450772826991655,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:132536258..132536280,+ | |short_description=p@chr9:132536258..132536280,+ | ||
}} | }} |
Latest revision as of 23:28, 31 July 2015
Short description: | p@chr9:132536258..132536280, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:132536258..132536280, + |
Coexpression cluster: | C2069_CD14_Neutrophils_Peripheral_Eosinophils_Basophils_immature_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.03e-41 | 76 |
hematopoietic system | 5.89e-41 | 98 |
blood island | 5.89e-41 | 98 |
bone element | 2.31e-38 | 82 |
hemolymphoid system | 9.65e-37 | 108 |
skeletal element | 1.40e-34 | 90 |
immune system | 2.50e-33 | 93 |
skeletal system | 1.08e-30 | 100 |
lateral plate mesoderm | 2.87e-17 | 203 |
musculoskeletal system | 1.43e-16 | 167 |
connective tissue | 5.75e-12 | 371 |
mesoderm | 2.64e-09 | 315 |
mesoderm-derived structure | 2.64e-09 | 315 |
presumptive mesoderm | 2.64e-09 | 315 |