FFCP PHASE1:Hg19::chr9:72873455..72873472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=309bp_to_uc004ahq.1_5end | |association_with_transcript=309bp_to_uc004ahq.1_5end | ||
|cluster_id=chr9:72873455..72873472,- | |||
|description=CAGE_peak_1_at_uc004ahq.1_5end | |description=CAGE_peak_1_at_uc004ahq.1_5end | ||
|id=chr9:72873455..72873472,- | |id=chr9:72873455..72873472,- | ||
|ontology_enrichment_celltype=CL:0000066!1.38e-14!254;CL:0002076!6.56e-12!43;CL:0000223!5.52e-11!59;CL:0002368!2.21e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.38e-14!254;CL:0002076!6.56e-12!43;CL:0000223!5.52e-11!59;CL:0002368!2.21e-07!13 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.37e-10;29!UBERON:0001041;1.61e-09;30!UBERON:0007297;2.30e-07;2!UBERON:0006595;5.34e-07;86 | |||
|ontology_enrichment_disease=DOID:305!7.58e-17!106;DOID:0050687!2.11e-13!143;DOID:1749!5.76e-09!14 | |ontology_enrichment_disease=DOID:305!7.58e-17!106;DOID:0050687!2.11e-13!143;DOID:1749!5.76e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;5.11e-09;14!DOID:0050615;3.99e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.23e-13,106;DOID:1749,7.38e-09,14;DOID:0050687,1.01e-08,143;DOID:0050615,4.09e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.28e-18!169;UBERON:0000925!1.28e-18!169;UBERON:0006595!1.28e-18!169;UBERON:0001007!4.98e-16!155;UBERON:0001555!4.98e-16!155;UBERON:0007026!4.98e-16!155;UBERON:0004921!1.95e-14!129;UBERON:0004185!1.95e-14!129;UBERON:0000077!1.94e-12!130;UBERON:0001004!6.67e-11!72;UBERON:0005911!1.88e-10!82;UBERON:0001041!1.18e-09!98;UBERON:0000065!4.29e-09!53;UBERON:0000466!1.90e-08!126;UBERON:0005177!5.86e-08!107;UBERON:0000464!6.94e-08!104;UBERON:0005178!3.50e-07!34;UBERON:0002224!3.50e-07!34;UBERON:0005181!9.19e-07!35;UBERON:0005153!9.51e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!1.28e-18!169;UBERON:0000925!1.28e-18!169;UBERON:0006595!1.28e-18!169;UBERON:0001007!4.98e-16!155;UBERON:0001555!4.98e-16!155;UBERON:0007026!4.98e-16!155;UBERON:0004921!1.95e-14!129;UBERON:0004185!1.95e-14!129;UBERON:0000077!1.94e-12!130;UBERON:0001004!6.67e-11!72;UBERON:0005911!1.88e-10!82;UBERON:0001041!1.18e-09!98;UBERON:0000065!4.29e-09!53;UBERON:0000466!1.90e-08!126;UBERON:0005177!5.86e-08!107;UBERON:0000464!6.94e-08!104;UBERON:0005178!3.50e-07!34;UBERON:0002224!3.50e-07!34;UBERON:0005181!9.19e-07!35;UBERON:0005153!9.51e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0005904;1.68e-12;4!UBERON:0000058;1.39e-10;10!UBERON:0006947;3.91e-10;3!UBERON:0004054;3.91e-10;3!UBERON:0002048;3.30e-09;22!UBERON:0000117;3.30e-09;22!UBERON:0000171;3.30e-09;22!UBERON:0000170;3.30e-09;22!UBERON:0005178;6.75e-08;34!UBERON:0002224;6.75e-08;34!UBERON:0005181;1.33e-07;35!UBERON:0000160;1.64e-07;17!UBERON:0003101;3.18e-07;22!UBERON:0000079;3.18e-07;22!UBERON:0005409;3.33e-07;22!UBERON:0000007;4.83e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,4.82e-13,145;UBERON:0001555,4.82e-13,145;UBERON:0007026,4.82e-13,145;UBERON:0005904,8.33e-13,4;UBERON:0004119,4.38e-12,160;UBERON:0000925,4.38e-12,160;UBERON:0006595,4.38e-12,160;UBERON:0006947,2.32e-10,3;UBERON:0004054,2.32e-10,3;UBERON:0004921,9.95e-10,118;UBERON:0005178,1.11e-09,34;UBERON:0002224,1.11e-09,34;UBERON:0002048,2.45e-09,22;UBERON:0000117,2.45e-09,22;UBERON:0000171,2.45e-09,22;UBERON:0000170,2.45e-09,22;UBERON:0005597,2.45e-09,22;UBERON:0000118,2.45e-09,22;UBERON:0005181,2.49e-09,35;UBERON:0005911,4.40e-09,82;UBERON:0005153,1.51e-08,37;UBERON:0008947,2.18e-08,38;UBERON:0003258,2.18e-08,38;UBERON:0005177,2.84e-08,101;UBERON:0001004,3.99e-08,74;UBERON:0000160,1.60e-07,17;UBERON:0000007,3.66e-07,2;UBERON:0003101,3.68e-07,22;UBERON:0000079,3.68e-07,22;UBERON:0003135,7.37e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0.130059347559878,0,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0.651083453856419,0,0.301150238155546,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.175669571386252,0.589405839739707,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0,0,0.57978255948989,1.09098448236334,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0.860919069801795,0.171567810298526,1.20725313949488,0,0.100528972411631,0.648119116109707,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0.268675568108545,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0.205476322550383,0,0.224170287987055,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0.909382714338778,0,0.907170879989041,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.241718899183244,1.00253235151642,1.10497186723076,0,0.182091168006717,0,0.902399225814824,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,1.95777922130672,0.183138929636687,0.247528499761764,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0,0.826424576804891,0.768760269460425,4.33883222481586,0.50578890427775,0,0.31481234683064,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,0.670302275535787,1.08890984861323,2.16530741786592,0.43050537267123,0,0.443430153536676,0,0,0,0.569647187174163,0,0,0,0,0,0.213648142254946,0,0,0,0,0.0711418433484141,0,0,0.191505370132367,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05854594449042,0,0.121360521749513,0,0,1.43246690842614,0.593929361665277,3.68592842519078,0,0,0,0,0.844501632511974,0.597743964753209,1.65770349318689,2.26739473068848,0.102268682502155,0,0,0.898683511473268,0.716084698702437,0,0.197286811273867,0,0,0.969332746095218,0.0927680981618513,0,0.260427761085233,0.524759999977174,0,0.796554137998498,2.2882828526349,0.472775363535873,0,0,0,0,0.241192877250816,0,0.442317039724898,0,0,0.544692317594951,0.697118721393016,0.384751292518985,0,0,0.897576444097721,0.108647371922008,0.31900115973192,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,0,0.632994193584081,0.652931232636591,0,0.216388639742091,4.97630965539252,2.0345239835768,2.4441205797345,0,0.123563938946503,0.417687798021821,0,0,0,0.182454789215666,1.36965233252463,0,2.76209081994573,2.41981432097328,0,0.126373159256976,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,1.07791637155815,0.609414446062818,3.84398670132466,0,0,0.0730893170861856,0,0.872901148395775,0.0882561266915003,0,0,0,0,4.10657903743086,0.240476460754601,1.49417096317547,0,0.288180834308212,0.114536596165916,0,0.14405479798815,0.248505071130865,3.06402245001834,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0.0787831823072236,0.576911008668165,0.741438982396034,0,0,0,0,0,0.550157746388935,0.415440338029185,0.449947783103001,0,0.0607495566580247,1.34173875039706,1.10327990218877,0.419636705079985,0,0,2.49489756515279,0,0,0.76280561296425,0,0,0,0,0,0,0.113312091520126,0.146552233678082,1.32506888912221,0.129282956361551,0,0,2.81926008926669,1.70859860108311,1.88645166119599,2.07119527673598,0,0.197611631897944,0.121792598380896,1.91502377331055,0,0,0,0,1.09937867375164,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.570930667089935,0,1.87333962322753,0.28984205722165,0.149254802886874,0,0.554805861502613,0.378806010550178,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.643324774124777,0,0,0.231522474323834,0,0,0.308801447160972,0.4385680991574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| ||
|short_description=p1@uc004ahq.1 | |short_description=p1@uc004ahq.1 | ||
}} | }} |
Latest revision as of 02:28, 1 August 2015
Short description: | p1@uc004ahq.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc004ahq.1_5end |
Coexpression cluster: | NA |
Association with transcript: | 309bp_to_uc004ahq.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 4.82e-13 | 145 |
digestive tract | 4.82e-13 | 145 |
primitive gut | 4.82e-13 | 145 |
duct of male reproductive system | 8.33e-13 | 4 |
endoderm-derived structure | 4.38e-12 | 160 |
endoderm | 4.38e-12 | 160 |
presumptive endoderm | 4.38e-12 | 160 |
male genital duct | 2.32e-10 | 3 |
internal male genitalia | 2.32e-10 | 3 |
subdivision of digestive tract | 9.95e-10 | 118 |
thoracic cavity element | 1.11e-09 | 34 |
thoracic cavity | 1.11e-09 | 34 |
lung | 2.45e-09 | 22 |
respiratory tube | 2.45e-09 | 22 |
respiration organ | 2.45e-09 | 22 |
pair of lungs | 2.45e-09 | 22 |
lung primordium | 2.45e-09 | 22 |
lung bud | 2.45e-09 | 22 |
thoracic segment organ | 2.49e-09 | 35 |
endo-epithelium | 4.40e-09 | 82 |
epithelial bud | 1.51e-08 | 37 |
respiratory primordium | 2.18e-08 | 38 |
endoderm of foregut | 2.18e-08 | 38 |
trunk region element | 2.84e-08 | 101 |
respiratory system | 3.99e-08 | 74 |
intestine | 1.60e-07 | 17 |
pituitary gland | 3.66e-07 | 2 |
male organism | 3.68e-07 | 22 |
male reproductive system | 3.68e-07 | 22 |
male reproductive organ | 7.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.23e-13 | 106 |
squamous cell carcinoma | 7.38e-09 | 14 |
cell type cancer | 1.01e-08 | 143 |
respiratory system cancer | 4.09e-08 | 16 |