FFCP PHASE1:Hg19::chrX:123870889..123870903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chrX:123870889..123870903,- | |||
|coexpression_cluster_id=C476 | |||
|description=CAGE_peak_at_chrX:123870889..123870903,- | |||
|id=chrX:123870889..123870903,- | |||
|ontology_enrichment_celltype=CL:0000791!5.05e-27!18;CL:0000789!5.05e-27!18;CL:0002420!5.05e-27!18;CL:0002419!5.05e-27!18;CL:0000790!5.05e-27!18;CL:0000084!1.52e-21!25;CL:0000827!1.52e-21!25;CL:0000625!3.50e-17!11;CL:0000624!2.02e-13!6;CL:0000838!1.97e-11!52;CL:0000542!3.84e-11!53;CL:0000051!3.84e-11!53;CL:0000842!1.46e-09!3;CL:0000224!2.88e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.78e-23;18!CL:0000789;7.78e-23;18!CL:0002419;7.78e-23;18!CL:0000624;5.14e-18;6!CL:0000084;2.27e-16;25!CL:0000895;5.70e-13;1!CL:0000625;4.22e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.10e-23,18;CL:0000789,9.10e-23,18;CL:0002420,9.10e-23,18;CL:0002419,9.10e-23,18;CL:0000790,9.10e-23,18;CL:0000624,5.96e-18,6;CL:0000084,2.54e-16,25;CL:0000827,2.54e-16,25;CL:0000810,8.64e-13,1;CL:0000895,8.64e-13,1;CL:0002436,8.64e-13,1;CL:0002427,8.64e-13,1;CL:0002428,8.64e-13,1;CL:0002429,8.64e-13,1;CL:0002433,8.64e-13,1;CL:0002431,8.64e-13,1;CL:0002432,8.64e-13,1;CL:0000625,4.43e-10,11;CL:0000838,1.14e-07,52;CL:0000542,1.62e-07,53;CL:0000051,1.62e-07,53;CL:0000893,4.98e-07,2;CL:0002489,4.98e-07,2;CL:0000809,4.98e-07,2;CL:0000808,4.98e-07,2;CL:0000894,4.98e-07,2;CL:0000806,4.98e-07,2;CL:0000807,4.98e-07,2;CL:0000805,4.98e-07,2;CL:0002425,4.98e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;7.78e-23;18!CL:0002427;5.70e-13;1!CL:0002425;4.04e-07;2!UBERON:0006965;4.04e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.15e-15!15;UBERON:0000179!4.15e-15!15;UBERON:0000463!4.15e-15!15;UBERON:0004177!4.42e-11!7;UBERON:0002370!3.00e-08!4;UBERON:0005058!3.00e-08!4;UBERON:0009113!3.00e-08!4;UBERON:0003295!3.00e-08!4;UBERON:0005562!3.00e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.93e-25;2!UBERON:0005058;4.93e-25;2!UBERON:0009113;4.93e-25;2!UBERON:0004177;1.33e-10;5!UBERON:0005057;1.33e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.45e-27,4;UBERON:0005058,3.45e-27,4;UBERON:0009113,3.45e-27,4;UBERON:0003295,3.45e-27,4;UBERON:0005562,3.45e-27,4;UBERON:0003351,2.33e-18,6;UBERON:0004177,7.90e-16,7;UBERON:0005057,7.90e-16,7;UBERON:0000974,2.94e-11,10;UBERON:0003408,2.94e-11,10;UBERON:0001042,2.94e-11,10;UBERON:0009145,2.94e-11,10;UBERON:0006562,2.76e-10,11;UBERON:0009722,2.76e-10,11;UBERON:0007690,2.76e-10,11 | |||
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| ||
|short_description=p@chrX:123870889..123870903,- | |||
}} | }} |
Latest revision as of 05:32, 1 August 2015
Short description: | p@chrX:123870889..123870903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:123870889..123870903, - |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.45e-27 | 4 |
hemolymphoid system gland | 3.45e-27 | 4 |
thymic region | 3.45e-27 | 4 |
pharyngeal gland | 3.45e-27 | 4 |
thymus primordium | 3.45e-27 | 4 |
pharyngeal epithelium | 2.33e-18 | 6 |
hemopoietic organ | 7.90e-16 | 7 |
immune organ | 7.90e-16 | 7 |
neck | 2.94e-11 | 10 |
gland of gut | 2.94e-11 | 10 |
chordate pharynx | 2.94e-11 | 10 |
pharyngeal region of foregut | 2.94e-11 | 10 |
pharynx | 2.76e-10 | 11 |
entire pharyngeal arch endoderm | 2.76e-10 | 11 |
early pharyngeal endoderm | 2.76e-10 | 11 |