FFCP PHASE1:Hg19::chrX:152991865..152991874,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
|||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:152991865..152991874,+ | |||
|coexpression_cluster_id=C475 | |coexpression_cluster_id=C475 | ||
|description=CAGE_peak_at_chrX:152991865..152991874,+ | |description=CAGE_peak_at_chrX:152991865..152991874,+ | ||
|id=chrX:152991865..152991874,+ | |id=chrX:152991865..152991874,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.49e-85!76;CL:0000557!3.46e-77!71;CL:0000839!1.45e-75!70;CL:0002009!6.99e-75!65;CL:0002194!1.05e-74!63;CL:0000576!1.05e-74!63;CL:0000040!1.05e-74!63;CL:0000559!1.05e-74!63;CL:0000860!3.24e-73!45;CL:0002057!5.01e-70!42;CL:0000763!2.41e-62!112;CL:0000049!2.41e-62!112;CL:0000738!3.23e-58!140;CL:0000037!2.39e-51!172;CL:0000566!2.39e-51!172;CL:0000988!3.79e-47!182;CL:0002031!4.99e-47!124;CL:0002087!5.80e-47!119;CL:0002032!5.90e-45!165;CL:0000837!5.90e-45!165;CL:0000134!1.14e-20!358;CL:0002320!1.87e-20!365;CL:0000219!5.95e-18!390;CL:0002393!3.03e-17!9;CL:0002397!3.03e-17!9;CL:0000048!3.25e-15!430;CL:0000723!1.22e-14!436;CL:0000034!1.38e-14!444;CL:0000063!2.40e-09!578;CL:0002371!5.08e-08!591;CL:0000094!9.37e-08!8;CL:0000144!2.09e-07!625;CL:0000012!6.33e-07!682;CL:0000875!8.41e-07!3;CL:0002396!8.41e-07!3 | |ontology_enrichment_celltype=CL:0000766!2.49e-85!76;CL:0000557!3.46e-77!71;CL:0000839!1.45e-75!70;CL:0002009!6.99e-75!65;CL:0002194!1.05e-74!63;CL:0000576!1.05e-74!63;CL:0000040!1.05e-74!63;CL:0000559!1.05e-74!63;CL:0000860!3.24e-73!45;CL:0002057!5.01e-70!42;CL:0000763!2.41e-62!112;CL:0000049!2.41e-62!112;CL:0000738!3.23e-58!140;CL:0000037!2.39e-51!172;CL:0000566!2.39e-51!172;CL:0000988!3.79e-47!182;CL:0002031!4.99e-47!124;CL:0002087!5.80e-47!119;CL:0002032!5.90e-45!165;CL:0000837!5.90e-45!165;CL:0000134!1.14e-20!358;CL:0002320!1.87e-20!365;CL:0000219!5.95e-18!390;CL:0002393!3.03e-17!9;CL:0002397!3.03e-17!9;CL:0000048!3.25e-15!430;CL:0000723!1.22e-14!436;CL:0000034!1.38e-14!444;CL:0000063!2.40e-09!578;CL:0002371!5.08e-08!591;CL:0000094!9.37e-08!8;CL:0000144!2.09e-07!625;CL:0000012!6.33e-07!682;CL:0000875!8.41e-07!3;CL:0002396!8.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-96;33!CL:0002057;2.30e-96;33!CL:0000576;1.64e-75;48!CL:0000473;2.73e-72;39!CL:0000234;2.73e-72;39!CL:0000766;5.84e-51;69!CL:0002393;4.08e-24;6!CL:0002397;4.08e-24;6!CL:0000763;8.79e-23;100!CL:0002087;2.82e-22;104!CL:0000738;7.69e-16;136!CL:0000875;9.48e-13;3!CL:0002396;9.48e-13;3!CL:0000767;3.29e-12;3!CL:0000094;1.60e-11;8!CL:0000226;3.30e-11;3!CL:0000842;3.30e-11;3!CL:0000988;3.84e-10;177!CL:0000081;2.72e-08;11!CL:0000219;2.89e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.94e-142,42;CL:0002057,1.94e-142,42;CL:0000473,1.73e-129,48;CL:0000234,1.73e-129,48;CL:0000766,2.96e-104,72;CL:0002009,5.09e-103,61;CL:0002194,1.18e-101,59;CL:0000576,1.18e-101,59;CL:0000040,1.18e-101,59;CL:0000559,1.18e-101,59;CL:0000557,4.60e-93,67;CL:0000839,5.10e-90,66;CL:0000763,1.35e-69,108;CL:0000049,1.35e-69,108;CL:0000738,4.27e-69,136;CL:0002087,4.40e-64,115;CL:0002031,1.59e-55,120;CL:0000037,5.29e-54,168;CL:0000988,9.83e-51,177;CL:0002032,8.73e-50,161;CL:0000837,8.73e-50,161;CL:0002393,4.00e-35,9;CL:0002397,4.00e-35,9;CL:0000134,4.79e-20,354;CL:0002320,1.90e-19,361;CL:0000219,2.47e-17,386;CL:0000034,7.35e-15,441;CL:0000048,9.53e-15,427;CL:0000723,2.17e-14,433;CL:0000875,9.14e-13,3;CL:0002396,9.14e-13,3;CL:0000767,4.54e-12,3;CL:0000094,1.82e-11,8;CL:0000226,3.07e-11,3;CL:0000842,3.07e-11,3;CL:0000081,2.98e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.22e-101;42!CL:0000049;1.45e-19;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.59e-69!80;UBERON:0001474!1.25e-64!86;UBERON:0002390!5.71e-64!102;UBERON:0003061!5.71e-64!102;UBERON:0002193!2.47e-56!112;UBERON:0004765!7.85e-54!101;UBERON:0001434!7.85e-54!101;UBERON:0002405!2.65e-43!115;UBERON:0002204!5.67e-29!167;UBERON:0003081!3.01e-27!216;UBERON:0002384!7.19e-20!375;UBERON:0000926!8.64e-08!448;UBERON:0004120!8.64e-08!448;UBERON:0006603!8.64e-08!448 | |ontology_enrichment_uberon=UBERON:0002371!8.59e-69!80;UBERON:0001474!1.25e-64!86;UBERON:0002390!5.71e-64!102;UBERON:0003061!5.71e-64!102;UBERON:0002193!2.47e-56!112;UBERON:0004765!7.85e-54!101;UBERON:0001434!7.85e-54!101;UBERON:0002405!2.65e-43!115;UBERON:0002204!5.67e-29!167;UBERON:0003081!3.01e-27!216;UBERON:0002384!7.19e-20!375;UBERON:0000926!8.64e-08!448;UBERON:0004120!8.64e-08!448;UBERON:0006603!8.64e-08!448 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.90e-81,76;UBERON:0001474,1.82e-74,82;UBERON:0002390,2.07e-70,98;UBERON:0003061,2.07e-70,98;UBERON:0004765,4.73e-67,90;UBERON:0002405,1.35e-64,93;UBERON:0002193,5.12e-63,108;UBERON:0001434,1.96e-59,100;UBERON:0002204,8.86e-32,167;UBERON:0003081,6.69e-29,203;UBERON:0002384,1.25e-18,371;UBERON:0000926,5.24e-15,315;UBERON:0004120,5.24e-15,315;UBERON:0006603,5.24e-15,315 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,1.15148819429164,8.3600706590681,0,0,0,0,0,0.587200878669695,10.5259127621057,5.01361118675354,5.4252717678963,0.447830948479849,0.971680998056939,0.257575567634187,2.4717700592526,3.02300754951048,2.42584061187816,3.0215774797739,2.87817521615278,1.85823822537062,2.58923153089935,1.2808035326455,2.83778675866302,1.72372840368309,1.93645405075148,2.70852973188684,4.51781614902251,4.63940455098338,2.24723484445085,1.53041946185451,1.28371610830437,3.83602275479425,3.95821560224059,3.59034583718937,3.83602275479425,2.90209238628584,0.56738522469114,2.4912889959823,2.00998932205395,2.60741459210101,2.38907729175628,3.63239701580021,1.84138817993782,1.58231193720442,7.18267973460602,6.37812899895131,7.12839394728478,7.41368965566868,2.4028302854641,1.76798145366788,8.83539505597871,3.77941686678271,5.29726045917438,0,0.546138611262131,0,1.28019066769952,0,0,0,0.954053754535364,1.1384259382189,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.696518949197069,0.26591592103773,0.715471872916026,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.591092280605782,0,1.15508732651774,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.6541442089831,2.5885704098234,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32700704533794,1.15148819429164,8.3600706590681,0,0,0,0,0,0.587200878669695,10.5259127621057,5.01361118675354,5.4252717678963,0.447830948479849,0.971680998056939,0.257575567634187,2.4717700592526,3.02300754951048,2.42584061187816,3.0215774797739,2.87817521615278,1.85823822537062,2.58923153089935,1.2808035326455,2.83778675866302,1.72372840368309,1.93645405075148,2.70852973188684,4.51781614902251,4.63940455098338,2.24723484445085,1.53041946185451,1.28371610830437,3.83602275479425,3.95821560224059,3.59034583718937,3.83602275479425,2.90209238628584,0.56738522469114,2.4912889959823,2.00998932205395,2.60741459210101,2.38907729175628,3.63239701580021,1.84138817993782,1.58231193720442,7.18267973460602,6.37812899895131,7.12839394728478,7.41368965566868,2.4028302854641,1.76798145366788,8.83539505597871,3.77941686678271,5.29726045917438,0,0.546138611262131,0,1.28019066769952,0,0,0,0.954053754535364,1.1384259382189,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0,0,0,0.0654895377488563,0,0,0,0.696518949197069,0.26591592103773,0.715471872916026,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.37872730027914,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.591092280605782,0,1.15508732651774,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.6541442089831,2.5885704098234,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chrX:152991865..152991874,+ | |short_description=p@chrX:152991865..152991874,+ | ||
}} | }} |
Latest revision as of 06:51, 1 August 2015
Short description: | p@chrX:152991865..152991874, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:152991865..152991874, + |
Coexpression cluster: | C475_CD14_Basophils_CD14CD16_Peripheral_CD133_large_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.90e-81 | 76 |
bone element | 1.82e-74 | 82 |
hematopoietic system | 2.07e-70 | 98 |
blood island | 2.07e-70 | 98 |
skeletal element | 4.73e-67 | 90 |
immune system | 1.35e-64 | 93 |
hemolymphoid system | 5.12e-63 | 108 |
skeletal system | 1.96e-59 | 100 |
musculoskeletal system | 8.86e-32 | 167 |
lateral plate mesoderm | 6.69e-29 | 203 |
connective tissue | 1.25e-18 | 371 |
mesoderm | 5.24e-15 | 315 |
mesoderm-derived structure | 5.24e-15 | 315 |
presumptive mesoderm | 5.24e-15 | 315 |