FFCP PHASE1:Hg19::chrX:38728212..38728224,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:38728212..38728224,- | |||
|coexpression_cluster_id=C82 | |coexpression_cluster_id=C82 | ||
|description=CAGE_peak_at_chrX:38728212..38728224,- | |description=CAGE_peak_at_chrX:38728212..38728224,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.69e-67!42;CL:0000766!5.53e-66!76;CL:0000860!1.58e-62!45;CL:0002194!8.18e-52!63;CL:0000576!8.18e-52!63;CL:0000040!8.18e-52!63;CL:0000559!8.18e-52!63;CL:0002009!5.19e-50!65;CL:0000839!5.98e-46!70;CL:0000557!3.32e-45!71;CL:0000763!3.88e-42!112;CL:0000049!3.88e-42!112;CL:0000738!1.95e-40!140;CL:0002087!6.05e-32!119;CL:0000037!3.22e-31!172;CL:0000566!3.22e-31!172;CL:0002032!3.24e-29!165;CL:0000837!3.24e-29!165;CL:0000988!5.35e-29!182;CL:0002031!2.30e-26!124;CL:0000094!2.90e-24!8;CL:0000081!2.28e-17!11;CL:0000134!1.55e-15!358;CL:0002393!3.08e-15!9;CL:0002397!3.08e-15!9;CL:0002320!4.81e-15!365;CL:0000219!2.60e-13!390;CL:0000767!2.74e-13!3;CL:0000034!2.18e-11!444;CL:0000048!3.08e-11!430;CL:0000723!6.06e-11!436;CL:0000771!2.31e-09!2;CL:0000063!6.31e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.69e-67!42;CL:0000766!5.53e-66!76;CL:0000860!1.58e-62!45;CL:0002194!8.18e-52!63;CL:0000576!8.18e-52!63;CL:0000040!8.18e-52!63;CL:0000559!8.18e-52!63;CL:0002009!5.19e-50!65;CL:0000839!5.98e-46!70;CL:0000557!3.32e-45!71;CL:0000763!3.88e-42!112;CL:0000049!3.88e-42!112;CL:0000738!1.95e-40!140;CL:0002087!6.05e-32!119;CL:0000037!3.22e-31!172;CL:0000566!3.22e-31!172;CL:0002032!3.24e-29!165;CL:0000837!3.24e-29!165;CL:0000988!5.35e-29!182;CL:0002031!2.30e-26!124;CL:0000094!2.90e-24!8;CL:0000081!2.28e-17!11;CL:0000134!1.55e-15!358;CL:0002393!3.08e-15!9;CL:0002397!3.08e-15!9;CL:0002320!4.81e-15!365;CL:0000219!2.60e-13!390;CL:0000767!2.74e-13!3;CL:0000034!2.18e-11!444;CL:0000048!3.08e-11!430;CL:0000723!6.06e-11!436;CL:0000771!2.31e-09!2;CL:0000063!6.31e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-35;33!CL:0002057;1.06e-35;33!CL:0000473;2.01e-26;39!CL:0000234;2.01e-26;39!CL:0000094;4.55e-25;8!CL:0000767;6.31e-25;3!CL:0000576;3.03e-23;48!CL:0000766;1.79e-21;69!CL:0000081;3.26e-18;11!CL:0000771;5.28e-17;2!CL:0002393;8.62e-13;6!CL:0002397;8.62e-13;6!CL:0000763;5.59e-09;100!CL:0002087;1.62e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;1.06e-35;33!CL:0002057;1.06e-35;33!CL:0000473;2.01e-26;39!CL:0000234;2.01e-26;39!CL:0000094;4.55e-25;8!CL:0000767;6.31e-25;3!CL:0000576;3.03e-23;48!CL:0000766;1.79e-21;69!CL:0000081;3.26e-18;11!CL:0000771;5.28e-17;2!CL:0002393;8.62e-13;6!CL:0002397;8.62e-13;6!CL:0000763;5.59e-09;100!CL:0002087;1.62e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.82e-46,42;CL:0002057,6.82e-46,42;CL:0000766,6.42e-45,72;CL:0000473,8.22e-40,48;CL:0000234,8.22e-40,48;CL:0002194,2.72e-31,59;CL:0000576,2.72e-31,59;CL:0000040,2.72e-31,59;CL:0000559,2.72e-31,59;CL:0002009,3.42e-30,61;CL:0000763,5.98e-29,108;CL:0000049,5.98e-29,108;CL:0000839,9.95e-28,66;CL:0000557,2.80e-27,67;CL:0000094,4.02e-25,8;CL:0000767,6.32e-25,3;CL:0000738,8.77e-25,136;CL:0000037,2.10e-19,168;CL:0002032,2.53e-18,161;CL:0000837,2.53e-18,161;CL:0000081,2.98e-18,11;CL:0000988,3.08e-18,177;CL:0000771,4.32e-17,2;CL:0002087,6.09e-17,115;CL:0002031,4.49e-14,120;CL:0000134,3.11e-09,354;CL:0002320,5.60e-09,361;CL:0002393,1.21e-08,9;CL:0002397,1.21e-08,9;CL:0000219,4.49e-08,386;CL:0000034,1.73e-07,441;CL:0000048,5.78e-07,427;CL:0000723,8.23e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-28;42!CL:0000049;6.49e-07;108 | |ontology_enrichment_development_v019=CL:0002057;2.44e-28;42!CL:0000049;6.49e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.48e-39!80;UBERON:0001474!4.31e-36!86;UBERON:0002390!7.28e-34!102;UBERON:0003061!7.28e-34!102;UBERON:0002193!3.69e-30!112;UBERON:0004765!1.16e-29!101;UBERON:0001434!1.16e-29!101;UBERON:0002405!3.61e-25!115;UBERON:0002384!2.66e-15!375;UBERON:0002204!4.56e-15!167;UBERON:0003081!6.01e-12!216 | |ontology_enrichment_uberon=UBERON:0002371!2.48e-39!80;UBERON:0001474!4.31e-36!86;UBERON:0002390!7.28e-34!102;UBERON:0003061!7.28e-34!102;UBERON:0002193!3.69e-30!112;UBERON:0004765!1.16e-29!101;UBERON:0001434!1.16e-29!101;UBERON:0002405!3.61e-25!115;UBERON:0002384!2.66e-15!375;UBERON:0002204!4.56e-15!167;UBERON:0003081!6.01e-12!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.27e-24,76;UBERON:0001474,7.77e-22,82;UBERON:0002390,2.25e-20,98;UBERON:0003061,2.25e-20,98;UBERON:0004765,1.15e-19,90;UBERON:0002405,6.04e-19,93;UBERON:0002193,3.17e-18,108;UBERON:0001434,1.96e-17,100;UBERON:0002204,2.53e-09,167;UBERON:0002384,1.25e-08,371;UBERON:0003081,2.65e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.521299627654,2.68680578668049,1.23852898652861,0,0,0,0,0,0,5.53995408531877,3.40925560699241,1.08505435357926,0,0,0,0.290796477559129,0,0.727752183563449,0,0,2.16794459626573,0.28769239232215,0.256160706529101,1.89185783910868,4.82643953031266,1.29096936716765,4.06279459783025,0.376484679085209,0.272906150057846,1.57306439111559,2.44867113896722,0,10.2293940127847,0,0,1.70489900213078,0.870627715885752,0,1.24564449799115,1.00499466102697,0,1.73751075764093,0.605399502633369,0,4.74693581161327,0.211255286311942,0.425208599930087,0,0,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01999881146064,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,0.5013797880454,1.22538230705385,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.521299627654,2.68680578668049,1.23852898652861,0,0,0,0,0,0,5.53995408531877,3.40925560699241,1.08505435357926,0,0,0,0.290796477559129,0,0.727752183563449,0,0,2.16794459626573,0.28769239232215,0.256160706529101,1.89185783910868,4.82643953031266,1.29096936716765,4.06279459783025,0.376484679085209,0.272906150057846,1.57306439111559,2.44867113896722,0,10.2293940127847,0,0,1.70489900213078,0.870627715885752,0,1.24564449799115,1.00499466102697,0,1.73751075764093,0.605399502633369,0,4.74693581161327,0.211255286311942,0.425208599930087,0,0,0.450530678524519,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01999881146064,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,0.5013797880454,1.22538230705385,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chrX:38728212..38728224,- | |short_description=p@chrX:38728212..38728224,- | ||
}} | }} |
Latest revision as of 08:00, 1 August 2015
Short description: | p@chrX:38728212..38728224, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:38728212..38728224, - |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.27e-24 | 76 |
bone element | 7.77e-22 | 82 |
hematopoietic system | 2.25e-20 | 98 |
blood island | 2.25e-20 | 98 |
skeletal element | 1.15e-19 | 90 |
immune system | 6.04e-19 | 93 |
hemolymphoid system | 3.17e-18 | 108 |
skeletal system | 1.96e-17 | 100 |
musculoskeletal system | 2.53e-09 | 167 |
connective tissue | 1.25e-08 | 371 |
lateral plate mesoderm | 2.65e-08 | 203 |