FFCP PHASE1:Mm9::chr2:117952325..117952336,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3304 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:117952325..117952336,+ | |||
|description=CAGE_peak_at_chr2:117952325..117952336,+ | |description=CAGE_peak_at_chr2:117952325..117952336,+ | ||
|id=chr2:117952325..117952336,+ | |id=chr2:117952325..117952336,+ | ||
|ontology_enrichment_celltype=CL:0000355!3.23e-08!9;CL:0000680!1.51e-07!6;CL:0000183!1.51e-07!6;CL:0000187!1.51e-07!6;CL:0000056!1.51e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,5.39e-28,6;CL:0000187,5.39e-28,6;CL:0000056,5.39e-28,6;CL:0000355,1.71e-26,9;CL:0000222,5.11e-24,7;CL:0000068,5.84e-22,3;CL:0002202,5.84e-22,3;CL:0000069,5.84e-22,3;CL:0002632,5.84e-22,3;CL:0002368,5.84e-22,3;CL:0000307,5.84e-22,3;CL:0000377,5.84e-22,3;CL:0000192,9.96e-21,3;CL:0000359,9.96e-21,3;CL:0002539,9.96e-21,3;CL:0000514,9.96e-21,3;CL:0002494,5.56e-10,3;CL:0000737,5.56e-10,3;CL:0000746,5.56e-10,3;CL:0000513,5.56e-10,3;CL:0002321,4.95e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002329!1.69e-09!11;UBERON:0003077!1.69e-09!11;UBERON:0003059!1.69e-09!11;UBERON:0007282!1.69e-09!11;UBERON:0009618!1.69e-09!11;UBERON:0007285!1.69e-09!11;UBERON:0001134!3.23e-08!9;UBERON:0002036!3.23e-08!9;UBERON:0002385!3.23e-08!9;UBERON:0000486!3.23e-08!9;UBERON:0001015!3.23e-08!9;UBERON:0004290!3.23e-08!9;UBERON:0003082!3.23e-08!9;UBERON:0000914!2.39e-07!17;UBERON:0000383!3.79e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.71e-26,9;UBERON:0002036,1.71e-26,9;UBERON:0002385,1.71e-26,9;UBERON:0000486,1.71e-26,9;UBERON:0007503,1.71e-26,9;UBERON:0001015,1.71e-26,9;UBERON:0002329,1.71e-26,9;UBERON:0003082,1.71e-26,9;UBERON:0003059,1.71e-26,9;UBERON:0007282,1.71e-26,9;UBERON:0004290,1.71e-26,9;UBERON:0009618,1.71e-26,9;UBERON:0000383,7.80e-24,10;UBERON:0003126,5.84e-22,3;UBERON:0001005,5.84e-22,3;UBERON:0007196,5.84e-22,3;UBERON:0001558,5.84e-22,3;UBERON:0007524,1.18e-21,11;UBERON:0003077,1.18e-21,11;UBERON:0007285,1.18e-21,11;UBERON:0001135,9.96e-21,3;UBERON:0004237,9.96e-21,3;UBERON:0004695,9.96e-21,3;UBERON:0002111,9.96e-21,3;UBERON:0004178,9.96e-21,3;UBERON:0000947,1.02e-15,4;UBERON:0001637,1.02e-15,4;UBERON:0004573,1.02e-15,4;UBERON:0003509,1.02e-15,4;UBERON:0004571,1.02e-15,4;UBERON:0010191,1.02e-15,4;UBERON:0004572,1.02e-15,4;UBERON:0000055,1.06e-12,5;UBERON:0007500,1.06e-12,5;UBERON:0001981,1.06e-12,5;UBERON:0002049,1.06e-12,5;UBERON:0007798,1.06e-12,5;UBERON:0004537,1.06e-12,5;UBERON:0006965,1.06e-12,5;UBERON:0004535,2.59e-07,23;UBERON:0001009,2.59e-07,23;UBERON:0002204,2.80e-07,32;UBERON:0005256,7.85e-07,45 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,2.94115744015507,2.04913645487534,0.971020706062307,2.01434908760924,1.31790010585369,5.68994931701213,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,2.05807548828758,0.286533439938757,2.06268836910977,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.35333957451034,0.422530259330042,0,0,0,8.01016851741492,6.33399663687746,4.04419556011827,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0.370389054739423,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0.837063261473815,1.5626706890476,0,2.94115744015507,2.04913645487534,0.971020706062307,2.01434908760924,1.31790010585369,5.68994931701213,0,0,1.09843091367236,0.194429899074283,0,0,0,0,0,2.05807548828758,0.286533439938757,2.06268836910977,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0.0755715601067855,0,0,0,0,0,0,0,0.511290967734173,0.779358013808606,0.35333957451034,0.422530259330042,0,0,0,8.01016851741492,6.33399663687746,4.04419556011827,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.834141747676794,0,0.411564272815887,0.398068533636986,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0,0,0,0.114248512609729,0,0.407302655690628,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0.324270453550071,0,2.87536413054709,0,0,0,0,0,0,0,0.162964976442026,0.169745085775188,0,0,0,0.390267295715598,0.157635144106191,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0,0,0,0,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0.18006109403131,0,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0,0,0,0,0,0,0.370389054739423,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr2:117952325..117952336,+ | |short_description=p@chr2:117952325..117952336,+ | ||
}} | }} |
Latest revision as of 19:47, 3 August 2015
Short description: | p@chr2:117952325..117952336, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:117952325..117952336, + |
Coexpression cluster: | MCL_coexpression_mm9:3304 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 5.39e-28 | 6 |
muscle cell | 5.39e-28 | 6 |
myoblast | 5.39e-28 | 6 |
multi-potent skeletal muscle stem cell | 1.71e-26 | 9 |
mesodermal cell | 5.11e-24 | 7 |
duct epithelial cell | 5.84e-22 | 3 |
epithelial cell of tracheobronchial tree | 5.84e-22 | 3 |
branched duct epithelial cell | 5.84e-22 | 3 |
epithelial cell of lower respiratory tract | 5.84e-22 | 3 |
respiratory epithelial cell | 5.84e-22 | 3 |
tracheal epithelial cell | 5.84e-22 | 3 |
tracheoblast | 5.84e-22 | 3 |
smooth muscle cell | 9.96e-21 | 3 |
vascular associated smooth muscle cell | 9.96e-21 | 3 |
aortic smooth muscle cell | 9.96e-21 | 3 |
smooth muscle myoblast | 9.96e-21 | 3 |
cardiocyte | 5.56e-10 | 3 |
striated muscle cell | 5.56e-10 | 3 |
cardiac muscle cell | 5.56e-10 | 3 |
cardiac muscle myoblast | 5.56e-10 | 3 |
embryonic cell | 4.95e-07 | 70 |