FFCP PHASE1:Mm9::chr10:127105447..127105465,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:127105447..127105465,+ | |||
|description=CAGE_peak_at_chr10:127105447..127105465,+ | |description=CAGE_peak_at_chr10:127105447..127105465,+ | ||
|id=chr10:127105447..127105465,+ | |id=chr10:127105447..127105465,+ | ||
|ontology_enrichment_celltype=CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002320!7.99e-08!46;CL:0000134!7.99e-08!46;CL:0000838!1.56e-07!12;CL:0002031!2.19e-07!25;CL:0000738!3.14e-07!17;CL:0002087!3.14e-07!17;CL:0000219!3.94e-07!54;CL:0000084!6.76e-07!11;CL:0000827!6.76e-07!11 | |ontology_enrichment_celltype=CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002320!7.99e-08!46;CL:0000134!7.99e-08!46;CL:0000838!1.56e-07!12;CL:0002031!2.19e-07!25;CL:0000738!3.14e-07!17;CL:0002087!3.14e-07!17;CL:0000219!3.94e-07!54;CL:0000084!6.76e-07!11;CL:0000827!6.76e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,3.01e-22,46;CL:0000134,3.01e-22,46;CL:0000988,3.66e-20,32;CL:0002032,3.66e-20,32;CL:0000037,3.66e-20,32;CL:0000837,3.66e-20,32;CL:0000219,4.50e-18,54;CL:0000034,1.21e-16,97;CL:0002031,5.18e-14,25;CL:0000723,7.66e-14,91;CL:0000048,7.66e-14,91;CL:0000049,1.31e-11,19;CL:0000738,3.31e-11,17;CL:0002087,3.31e-11,17;CL:0000838,1.63e-10,12;CL:0000542,1.34e-09,13;CL:0000051,1.34e-09,13;CL:0000084,7.65e-09,11;CL:0000827,7.65e-09,11;CL:0000192,1.10e-07,3;CL:0000359,1.10e-07,3;CL:0002539,1.10e-07,3;CL:0000514,1.10e-07,3;CL:0000763,2.19e-07,16 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.99e-08!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.01e-22,46;UBERON:0000055,6.21e-08,5;UBERON:0007500,6.21e-08,5;UBERON:0001981,6.21e-08,5;UBERON:0002049,6.21e-08,5;UBERON:0007798,6.21e-08,5;UBERON:0004537,6.21e-08,5;UBERON:0006965,6.21e-08,5;UBERON:0001135,1.10e-07,3;UBERON:0004237,1.10e-07,3;UBERON:0004695,1.10e-07,3;UBERON:0002111,1.10e-07,3;UBERON:0004178,1.10e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0.774739940649458,10.4183654392233,9.12851652655775,3.5955773327356,1.35612670292072,0.342401459862411,0.786783621770977,0,0,0.699561878128147,1.26184866143295,1.37114433605739,0,0.17008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0.418531630736908,0,0,2.35292595212406,1.36609096991689,1.45653105909346,2.01434908760924,2.73717714292689,3.67093504323363,0,0.65407546914134,0.659058548203415,0,0.55994568650145,0,2.18117387875057,0.725362142011344,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,1.3498495759221,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,4.63783181922684,0,0,0,0,0,0.140444420131752,2.38602451609281,3.89679006904303,3.18005617059306,0.563373679106722,3.84979432242953,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.578397427679647,0.884610551949874,0.161766849947409,0,0.969750506270444,0,0.292780797011547,0,0,3.71426885968353,1.19980546198682,1.39777249780371,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.703804496655795,0.876782929710299,0,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,1.28673953557358,0.568326998791185,0.207125772535502,0,0.540186184383045,0,0.393528463494808,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.280543279561274,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,1.34005005953453,1.19021820443007,0.975668239288994,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0.433947175744535,3.01582567878545,2.17562273527484,0,0,0,0,0.491804836130026,0.504941854408746,0,0,0.646270193198397,1.19484398976276,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,0,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.720244376125241,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0,0.65954501176592,0.807322133479528,0.482503399425247,0.477489376012546,0,0.291480836629851,0,0.512612642393558,0.412773735926445,0.740778109478847,0,0,0.228778173206523,4.07948231985253,6.29781535456461,3.31679937130617,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.404593039154462,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.935015217452552,0,0,0.269141569828427,0,0,0.750729901804728,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.774739940649458,10.4183654392233,9.12851652655775,3.5955773327356,1.35612670292072,0.342401459862411,0.786783621770977,0,0,0.699561878128147,1.26184866143295,1.37114433605739,0,0.17008658030214,1.09220046320974,1.04479915655574,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0.418531630736908,0,0,2.35292595212406,1.36609096991689,1.45653105909346,2.01434908760924,2.73717714292689,3.67093504323363,0,0.65407546914134,0.659058548203415,0,0.55994568650145,0,2.18117387875057,0.725362142011344,1.00828139742739,0.257259436035947,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,1.3498495759221,0,0,0.898800331555214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.151452386666368,0.151143120213571,4.63783181922684,0,0,0,0,0,0.140444420131752,2.38602451609281,3.89679006904303,3.18005617059306,0.563373679106722,3.84979432242953,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0,1.03575153458869,0.445326417194474,0.173485326766136,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0.247194967734374,0.578397427679647,0.884610551949874,0.161766849947409,0,0.969750506270444,0,0.292780797011547,0,0,3.71426885968353,1.19980546198682,1.39777249780371,0,0,0,0.173824320192276,0.255715457330331,0,0.162241263067758,0.203678727700633,0.373220911830279,0.252722758433675,0,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.187403449119458,0.258703370739016,0,0,0.703804496655795,0.876782929710299,0,0.348252166522167,0.411564272815887,0.59710280045548,2.1066395619397,1.28673953557358,0.568326998791185,0.207125772535502,0,0.540186184383045,0,0.393528463494808,0,0,0.268273401399619,0.350296027101508,0.16455984991348,0,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0.210289948564127,0,0,0,0,0.464473343720877,0,0,0,0.190225626112559,0.474529061544512,0.164698954724011,0,0,0.38992817423824,0,0.216138049874694,0,0.569003702859245,0.228497025219458,0,0.203651327845314,0.775809948670503,0.280543279561274,0.252946148497029,0.442830443938806,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0,0.739012760666419,0,0.162964976442026,0.339490171550376,0,1.34005005953453,1.19021820443007,0.975668239288994,0.315270288212382,0.664394068946325,0.318909537314974,0,0.172684981865896,0.433947175744535,3.01582567878545,2.17562273527484,0,0,0,0,0.491804836130026,0.504941854408746,0,0,0.646270193198397,1.19484398976276,0.445597348164788,0.566153061577665,0.404810701674894,0.584511715822624,1.18586333383957,0,0.283880170416537,0.178065603667255,0.488660878060728,0.329940245945071,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,1.70219802876894,0.720244376125241,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.164549020602121,0.913394847343798,0,0,0,0.65954501176592,0.807322133479528,0.482503399425247,0.477489376012546,0,0.291480836629851,0,0.512612642393558,0.412773735926445,0.740778109478847,0,0,0.228778173206523,4.07948231985253,6.29781535456461,3.31679937130617,0,0,0.203319467126849,0.216010681643603,0.209088296014469,0.655087691238533,0.404593039154462,0.165306911450672,0.785267825952089,0.129614973291793,0,0,0,0,0,0.129159823477731,0.337912250981556,0.117357238645754,0.39061315453185,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0.537080087002444,0.198681354781265,0.120195449519969,0.295379054349154,0.201932899896295,0.15241361331,0.100826185136841,0.194915761479505,0.0962118416403295,0.935015217452552,0,0,0.269141569828427,0,0,0.750729901804728,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0.51776031175182,0,0.399024873401031,0.512200817262403,0,0,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0,0.147198920134397,0,0.354951612318675,0,0.290692833264657,0.282328141245992,0.169229215783353,0.182927972872773,0.263069711437843,0.271608227691724,0,0.355905054372522,0.0985044823755635,0.409231043169689,0.464810523557898,0.192906610981141,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p@chr10:127105447..127105465,+ | |short_description=p@chr10:127105447..127105465,+ | ||
}} | }} |
Latest revision as of 01:47, 4 August 2015
Short description: | p@chr10:127105447..127105465, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127105447..127105465, + |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 3.01e-22 | 46 |
mesenchymal cell | 3.01e-22 | 46 |
hematopoietic cell | 3.66e-20 | 32 |
hematopoietic oligopotent progenitor cell | 3.66e-20 | 32 |
hematopoietic stem cell | 3.66e-20 | 32 |
hematopoietic multipotent progenitor cell | 3.66e-20 | 32 |
motile cell | 4.50e-18 | 54 |
stem cell | 1.21e-16 | 97 |
hematopoietic lineage restricted progenitor cell | 5.18e-14 | 25 |
somatic stem cell | 7.66e-14 | 91 |
multi fate stem cell | 7.66e-14 | 91 |
common myeloid progenitor | 1.31e-11 | 19 |
leukocyte | 3.31e-11 | 17 |
nongranular leukocyte | 3.31e-11 | 17 |
lymphoid lineage restricted progenitor cell | 1.63e-10 | 12 |
lymphocyte | 1.34e-09 | 13 |
common lymphoid progenitor | 1.34e-09 | 13 |
T cell | 7.65e-09 | 11 |
pro-T cell | 7.65e-09 | 11 |
smooth muscle cell | 1.10e-07 | 3 |
vascular associated smooth muscle cell | 1.10e-07 | 3 |
aortic smooth muscle cell | 1.10e-07 | 3 |
smooth muscle myoblast | 1.10e-07 | 3 |
myeloid cell | 2.19e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.01e-22 | 46 |
vessel | 6.21e-08 | 5 |
epithelial tube open at both ends | 6.21e-08 | 5 |
blood vessel | 6.21e-08 | 5 |
vasculature | 6.21e-08 | 5 |
vascular system | 6.21e-08 | 5 |
blood vasculature | 6.21e-08 | 5 |
vascular cord | 6.21e-08 | 5 |
smooth muscle tissue | 1.10e-07 | 3 |
blood vessel smooth muscle | 1.10e-07 | 3 |
arterial system smooth muscle | 1.10e-07 | 3 |
artery smooth muscle tissue | 1.10e-07 | 3 |
aorta smooth muscle tissue | 1.10e-07 | 3 |