FFCP PHASE1:Mm9::chr5:27384379..27384387,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:27384379..27384387,+ to FFCP PHASE1:Mm9::chr5:27384379..27384387,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1170 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:27384379..27384387,+ | |||
|description=CAGE_peak_at_chr5:27384379..27384387,+ | |||
|id=chr5:27384379..27384387,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.68e-13!50;UBERON:0006238!1.68e-13!50;UBERON:0000033!1.11e-12!63;UBERON:0002616!1.51e-12!49;UBERON:0001049!2.80e-12!52;UBERON:0005068!2.80e-12!52;UBERON:0006241!2.80e-12!52;UBERON:0007135!2.80e-12!52;UBERON:0002346!2.34e-11!71;UBERON:0003075!2.34e-11!71;UBERON:0007284!2.34e-11!71;UBERON:0001017!1.22e-09!73;UBERON:0005743!1.22e-09!73;UBERON:0000073!3.89e-09!75;UBERON:0001016!3.89e-09!75;UBERON:0002020!1.24e-08!34;UBERON:0003056!1.38e-08!49;UBERON:0003080!8.24e-08!40;UBERON:0004121!1.27e-07!102;UBERON:0000924!1.27e-07!102;UBERON:0006601!1.27e-07!102;UBERON:0002791!2.41e-07!29;UBERON:0003528!2.41e-07!29;UBERON:0001893!2.41e-07!29;UBERON:0002780!4.93e-07!39;UBERON:0001890!4.93e-07!39;UBERON:0006240!4.93e-07!39;UBERON:0007811!8.13e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,8.35e-13,6;UBERON:0004732,8.35e-13,6;UBERON:0002028,8.35e-13,6;UBERON:0007277,8.35e-13,6;UBERON:0000955,1.61e-10,47;UBERON:0006238,1.61e-10,47;UBERON:0002259,2.09e-09,1;UBERON:0002314,2.09e-09,1;UBERON:0004061,2.09e-09,1;UBERON:0006777,2.09e-09,1;UBERON:0005882,2.09e-09,1;UBERON:0002037,2.53e-09,4;UBERON:0002680,2.53e-09,4;UBERON:0001895,2.53e-09,4;UBERON:0010092,2.53e-09,4;UBERON:0006215,2.53e-09,4;UBERON:0000073,5.31e-09,54;UBERON:0002950,6.37e-09,4;UBERON:0001891,6.37e-09,4;UBERON:0009616,6.37e-09,4;UBERON:0010286,6.37e-09,4;UBERON:0001017,2.67e-08,73;UBERON:0002616,3.10e-08,46;UBERON:0001016,4.65e-08,75;UBERON:0001049,3.12e-07,52;UBERON:0005068,3.12e-07,52;UBERON:0006241,3.12e-07,52;UBERON:0007135,3.12e-07,52 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,4.68449275218475,5.44561437714983,0,0,0,0,1.79748767285787,2.28750301409313,0.251308704225729,0.347648640384553,0.767146371990992,1.66230435647648,0.648965052271031,0,0,0,0,0,0,0,0.60281927134286,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0.841159794256509,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.619160603889667,1.11116716421827,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,1.37147700954166,0.354951612318675,0,0.436039249896986,0.282328141245992,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.307213066512487,0,0.182975287204819,0.52091337055676,0,1.12552522006336,0.45839474333043,0.589257170947335,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,4.68449275218475,5.44561437714983,0,0,0,0,1.79748767285787,2.28750301409313,0.251308704225729,0.347648640384553,0.767146371990992,1.66230435647648,0.648965052271031,0,0,0,0,0,0,0,0.60281927134286,0.136072998302656,0,0.187403449119458,0.776110112217047,0,0,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0.180062061461015,0,0,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0.841159794256509,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.144649058581512,0,0,0,0,0.642202359951168,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,3.21321316421807,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.619160603889667,1.11116716421827,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.36630324853453,0.428736758158132,0,0.564751842617067,0.460325236507177,0,0.68741272937475,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0,1.37147700954166,0.354951612318675,0,0.436039249896986,0.282328141245992,0,0,0,0,0,0.118635018124174,0.0985044823755635,0.818462086339379,0.309873682371932,0,0.249810577937946,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr5:27384379..27384387,+ | |||
}} | }} |
Latest revision as of 05:48, 4 August 2015
Short description: | p@chr5:27384379..27384387, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:27384379..27384387, + |
Coexpression cluster: | MCL_coexpression_mm9:1170 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 8.35e-13 | 6 |
segmental subdivision of nervous system | 8.35e-13 | 6 |
hindbrain | 8.35e-13 | 6 |
presumptive hindbrain | 8.35e-13 | 6 |
brain | 1.61e-10 | 47 |
future brain | 1.61e-10 | 47 |
corpora quadrigemina | 2.09e-09 | 1 |
midbrain tectum | 2.09e-09 | 1 |
neural tube mantle layer | 2.09e-09 | 1 |
tectal plate | 2.09e-09 | 1 |
neural tube alar plate | 2.09e-09 | 1 |
cerebellum | 2.53e-09 | 4 |
regional part of metencephalon | 2.53e-09 | 4 |
metencephalon | 2.53e-09 | 4 |
future metencephalon | 2.53e-09 | 4 |
rhombic lip | 2.53e-09 | 4 |
regional part of nervous system | 5.31e-09 | 54 |
regional part of midbrain | 6.37e-09 | 4 |
midbrain | 6.37e-09 | 4 |
presumptive midbrain | 6.37e-09 | 4 |
midbrain neural tube | 6.37e-09 | 4 |
central nervous system | 2.67e-08 | 73 |
regional part of brain | 3.10e-08 | 46 |
nervous system | 4.65e-08 | 75 |
neural tube | 3.12e-07 | 52 |
neural rod | 3.12e-07 | 52 |
future spinal cord | 3.12e-07 | 52 |
neural keel | 3.12e-07 | 52 |