FFCP PHASE1:Mm9::chr3:90418268..90418279,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=72|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:90418268..90418279,+|id=chr3:90418268..90418279,+|ontology_enrichment_celltype=CL:0000680!3.80e-07!6;CL:0000183!3.80e-07!6;CL:0000187!3.80e-07!6;CL:0000056!3.80e-07!6|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0000680,1.87e-23,6;CL:0000187,1.87e-23,6;CL:0000056,1.87e-23,6;CL:0000222,3.57e-20,7;CL:0000355,8.62e-16,9;CL:0000192,1.42e-12,3;CL:0000359,1.42e-12,3;CL:0002539,1.42e-12,3;CL:0000514,1.42e-12,3;CL:0002494,1.63e-12,3;CL:0000737,1.63e-12,3;CL:0000746,1.63e-12,3;CL:0000513,1.63e-12,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003975!1.14e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0001134,8.62e-16,9;UBERON:0002036,8.62e-16,9;UBERON:0002385,8.62e-16,9;UBERON:0000486,8.62e-16,9;UBERON:0007503,8.62e-16,9;UBERON:0001015,8.62e-16,9;UBERON:0002329,8.62e-16,9;UBERON:0003082,8.62e-16,9;UBERON:0003059,8.62e-16,9;UBERON:0007282,8.62e-16,9;UBERON:0004290,8.62e-16,9;UBERON:0009618,8.62e-16,9;UBERON:0000383,2.97e-14,10;UBERON:0007524,5.41e-13,11;UBERON:0003077,5.41e-13,11;UBERON:0007285,5.41e-13,11;UBERON:0001135,1.42e-12,3;UBERON:0004237,1.42e-12,3;UBERON:0004695,1.42e-12,3;UBERON:0002111,1.42e-12,3;UBERON:0004178,1.42e-12,3;UBERON:0000947,1.15e-09,4;UBERON:0001637,1.15e-09,4;UBERON:0004573,1.15e-09,4;UBERON:0003509,1.15e-09,4;UBERON:0004571,1.15e-09,4;UBERON:0010191,1.15e-09,4;UBERON:0004572,1.15e-09,4;UBERON:0000055,6.50e-08,5;UBERON:0007500,6.50e-08,5;UBERON:0001981,6.50e-08,5;UBERON:0002049,6.50e-08,5;UBERON:0007798,6.50e-08,5;UBERON:0004537,6.50e-08,5;UBERON:0006965,6.50e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.550640256485045,0,0,0,0,0,0,0,0,0,0,1.43266719969378,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,1.02258193546835,1.29893002301434,0.70667914902068,0,0,0,0,4.76280290224671,4.05375784760158,6.0662933401774,0,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.17230640686684,0.476293691283074,0,0,0.824171801606613,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr3:90418268..90418279,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=72 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:90418268..90418279,+ | |||
|description=CAGE_peak_at_chr3:90418268..90418279,+ | |||
|id=chr3:90418268..90418279,+ | |||
|ontology_enrichment_celltype=CL:0000680!3.80e-07!6;CL:0000183!3.80e-07!6;CL:0000187!3.80e-07!6;CL:0000056!3.80e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,7.38e-28,3;CL:0002202,7.38e-28,3;CL:0000069,7.38e-28,3;CL:0002632,7.38e-28,3;CL:0002368,7.38e-28,3;CL:0000307,7.38e-28,3;CL:0000377,7.38e-28,3;CL:0000680,1.87e-23,6;CL:0000187,1.87e-23,6;CL:0000056,1.87e-23,6;CL:0000222,3.57e-20,7;CL:0000355,8.62e-16,9;CL:0000192,1.42e-12,3;CL:0000359,1.42e-12,3;CL:0002539,1.42e-12,3;CL:0000514,1.42e-12,3;CL:0002494,1.63e-12,3;CL:0000737,1.63e-12,3;CL:0000746,1.63e-12,3;CL:0000513,1.63e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003975!1.14e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,7.38e-28,3;UBERON:0001005,7.38e-28,3;UBERON:0007196,7.38e-28,3;UBERON:0001558,7.38e-28,3;UBERON:0001134,8.62e-16,9;UBERON:0002036,8.62e-16,9;UBERON:0002385,8.62e-16,9;UBERON:0000486,8.62e-16,9;UBERON:0007503,8.62e-16,9;UBERON:0001015,8.62e-16,9;UBERON:0002329,8.62e-16,9;UBERON:0003082,8.62e-16,9;UBERON:0003059,8.62e-16,9;UBERON:0007282,8.62e-16,9;UBERON:0004290,8.62e-16,9;UBERON:0009618,8.62e-16,9;UBERON:0000383,2.97e-14,10;UBERON:0007524,5.41e-13,11;UBERON:0003077,5.41e-13,11;UBERON:0007285,5.41e-13,11;UBERON:0001135,1.42e-12,3;UBERON:0004237,1.42e-12,3;UBERON:0004695,1.42e-12,3;UBERON:0002111,1.42e-12,3;UBERON:0004178,1.42e-12,3;UBERON:0000947,1.15e-09,4;UBERON:0001637,1.15e-09,4;UBERON:0004573,1.15e-09,4;UBERON:0003509,1.15e-09,4;UBERON:0004571,1.15e-09,4;UBERON:0010191,1.15e-09,4;UBERON:0004572,1.15e-09,4;UBERON:0000055,6.50e-08,5;UBERON:0007500,6.50e-08,5;UBERON:0001981,6.50e-08,5;UBERON:0002049,6.50e-08,5;UBERON:0007798,6.50e-08,5;UBERON:0004537,6.50e-08,5;UBERON:0006965,6.50e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,1.31790010585369,0.550640256485045,0,0,0,0,0,0,0,0,0,0,1.43266719969378,1.03134418455488,0,0,0,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,1.02258193546835,1.29893002301434,0.70667914902068,0,0,0,0,4.76280290224671,4.05375784760158,6.0662933401774,0,0,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0.199034266818493,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0.54390568381871,0,0,0,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0.161464426695906,0.0603129249281559,0.358117032009409,0,0.291480836629851,0,0,0,0.185194527369712,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0.216010681643603,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0.563047426353546,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0.17230640686684,0.476293691283074,0,0,0.824171801606613,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr3:90418268..90418279,+ | |||
}} |
Latest revision as of 06:12, 4 August 2015
Short description: | p@chr3:90418268..90418279, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:90418268..90418279, + |
Coexpression cluster: | MCL_coexpression_mm9:72 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of tracheobronchial tree | 7.38e-28 | 3 |
branched duct epithelial cell | 7.38e-28 | 3 |
epithelial cell of lower respiratory tract | 7.38e-28 | 3 |
respiratory epithelial cell | 7.38e-28 | 3 |
tracheal epithelial cell | 7.38e-28 | 3 |
tracheoblast | 7.38e-28 | 3 |
muscle precursor cell | 1.87e-23 | 6 |
muscle cell | 1.87e-23 | 6 |
myoblast | 1.87e-23 | 6 |
mesodermal cell | 3.57e-20 | 7 |
multi-potent skeletal muscle stem cell | 8.62e-16 | 9 |
smooth muscle cell | 1.42e-12 | 3 |
vascular associated smooth muscle cell | 1.42e-12 | 3 |
aortic smooth muscle cell | 1.42e-12 | 3 |
smooth muscle myoblast | 1.42e-12 | 3 |
cardiocyte | 1.63e-12 | 3 |
striated muscle cell | 1.63e-12 | 3 |
cardiac muscle cell | 1.63e-12 | 3 |
cardiac muscle myoblast | 1.63e-12 | 3 |