FFCP PHASE1:Mm9::chr10:36857118..36857141,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:36857118..36857141,- | |||
|description=CAGE_peak_at_chr10:36857118..36857141,- | |description=CAGE_peak_at_chr10:36857118..36857141,- | ||
|id=chr10:36857118..36857141,- | |id=chr10:36857118..36857141,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.89e-09,23;CL:0000337,1.89e-09,23;CL:0000723,1.97e-09,91;CL:0000048,1.97e-09,91;CL:0002319,3.50e-09,43;CL:0000393,4.12e-09,39;CL:0000211,4.12e-09,39;CL:0002194,5.81e-09,4;CL:0000766,5.81e-09,4;CL:0000234,5.81e-09,4;CL:0000576,5.81e-09,4;CL:0000235,5.81e-09,4;CL:0000864,5.81e-09,4;CL:0002009,5.81e-09,4;CL:0000040,5.81e-09,4;CL:0000559,5.81e-09,4;CL:0000221,6.98e-09,44;CL:0000133,6.98e-09,44;CL:0002321,8.23e-09,70;CL:0000034,1.89e-08,97;CL:0000540,3.48e-08,33;CL:0000047,3.48e-08,33;CL:0000031,3.48e-08,33;CL:0000404,3.48e-08,33;CL:0002293,6.90e-08,3;CL:0000473,2.95e-07,7;CL:0002092,6.80e-07,3;CL:0002540,6.80e-07,3;CL:0002608,8.54e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.63e-10,5;UBERON:0002315,8.63e-10,5;UBERON:0002240,4.34e-08,6;UBERON:0005174,4.34e-08,6;UBERON:0001137,4.34e-08,6;UBERON:0002371,4.16e-07,16 | |||
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.788655413395594,0.822686601634433,1.27316895539409,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,8.93867407626599,7.19776211658553,0.734187008646726,3.12956537739216,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0.85960031981627,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0.889294796111139,1.3498495759221,3.9554654502679,1.4209602298922,1.79760066311043,3.07374644257244,0.829516898467821,0.675029691658453,0.210324961351382,1.71390590642282,1.76694832761291,1.46988959057945,1.34183659425531,1.83843757322004,1.10115880999389,0.127687338085188,0,0.659431438650969,0.274462930807229,1.04182674111352,0,0,0,1.17851434189467,1.13897344639282,1.4911955666024,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,2.55645483867087,1.29893002301434,1.06001872353102,0.422530259330042,12.8326477414318,15.2883143823987,35.5533351576666,0.216491041011214,0.506719730950197,0,0.22836775943812,1.03575153458869,0,0.520455980298408,0.608930956624282,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0.647067399789637,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0.239630249011841,0,0,0.299581278809645,0,0.376963056338593,0,0,0.62336413367868,0.324482526135515,0.305518091550949,0.995255764880744,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,1.32374256117473,0.527853372491847,1.7535658594206,0.278047249225598,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0,0.411618449517138,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0.502670417600539,0,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0,0.31399745568275,0,0,0.166845105716094,0,0.449724224769707,1.01430060694251,0,0,0,0,0,0,0.372140947668503,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0.947457058852424,0.325929952884052,0.169745085775188,0,0,0.238043640886014,1.56106918286239,0.315270288212382,0.221464689648775,0,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0.468846746368813,2.29508923527346,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,1.33679204449436,0.283076530788832,0,0.876767573733936,1.18586333383957,0,0.709700426041343,0.35613120733451,0.325773918707152,1.31976098378028,0,0,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0.900305470156551,0.646793418913773,1.07168517515796,0.886701168211368,0.891844088010353,0.329098041204242,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,0.645857706783622,0.422190474497091,1.3130957840345,0.656563598980245,0,0,0.512612642393558,1.65109494370578,0.555583582109135,0.376736914009382,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0.474503990371703,0,0,0,0.655087691238533,0.674321731924103,0.41326727862668,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0,0.337912250981556,0.234714477291508,0,0,0.241584120826006,0,0.948033361884535,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0.501572104035363,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,1.14166082342594,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,0.367687016900028,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.655490552289177,0.384150914429216,0.516919220600519,0.476293691283074,0.231768651889711,1.15745532278223,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0,1.12228454331548,0.474540072496697,0.591026894253381,0,0.309873682371932,0,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.661774257358546,0.927471342481686 | |phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0,0,0,0,0,0.281577444303333,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.788655413395594,0.822686601634433,1.27316895539409,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,1.14846392823004,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0,0,0,0,0,0.332469290716985,0.408338712524738,0.418531630736908,0,0,0,0.683045484958446,0,8.93867407626599,7.19776211658553,0.734187008646726,3.12956537739216,0.218025156380447,0,0.388859798148567,0,0,0,0,0,0.257259436035947,0.85960031981627,0,1.41621522601718,1.05798195854407,0.633831403506179,0,0.889294796111139,1.3498495759221,3.9554654502679,1.4209602298922,1.79760066311043,3.07374644257244,0.829516898467821,0.675029691658453,0.210324961351382,1.71390590642282,1.76694832761291,1.46988959057945,1.34183659425531,1.83843757322004,1.10115880999389,0.127687338085188,0,0.659431438650969,0.274462930807229,1.04182674111352,0,0,0,1.17851434189467,1.13897344639282,1.4911955666024,0.151452386666368,0.604572480854284,0,0,0,0,0,0,0,2.55645483867087,1.29893002301434,1.06001872353102,0.422530259330042,12.8326477414318,15.2883143823987,35.5533351576666,0.216491041011214,0.506719730950197,0,0.22836775943812,1.03575153458869,0,0.520455980298408,0.608930956624282,0.230615497256059,0.150722640552623,0.352766121407114,0.125666591329675,0.247194967734374,0.289198713839823,0,0.647067399789637,0.441683036920787,0,0,0.292780797011547,0,0.255457055208591,0.239630249011841,0,0,0.299581278809645,0,0.376963056338593,0,0,0.62336413367868,0.324482526135515,0.305518091550949,0.995255764880744,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.272145996605311,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,1.32374256117473,0.527853372491847,1.7535658594206,0.278047249225598,0.348252166522167,1.23469281844766,0.59710280045548,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0,0.16455984991348,0,0.243206428637567,0.146199987425332,0,0,0,0.411618449517138,0,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0.502670417600539,0,0.38992817423824,0.898819408654221,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.350679099451593,0.442655759869801,0,0.31399745568275,0,0,0.166845105716094,0,0.449724224769707,1.01430060694251,0,0,0,0,0,0,0.372140947668503,0.624075346229121,0,0,0.482443521363367,0.554259570499814,0.947457058852424,0.325929952884052,0.169745085775188,0,0,0.238043640886014,1.56106918286239,0.315270288212382,0.221464689648775,0,0.491589944147214,0.518054945597687,0.144649058581512,1.50791283939272,1.63171705145613,0,0,0,0.468846746368813,2.29508923527346,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,1.33679204449436,0.283076530788832,0,0.876767573733936,1.18586333383957,0,0.709700426041343,0.35613120733451,0.325773918707152,1.31976098378028,0,0,0.604647113929502,0.565815239267694,0.590603785761546,0.614870295887855,1.55056975900933,0.363533729477506,0.356497378384721,0,0,0,0,0.900305470156551,0.646793418913773,1.07168517515796,0.886701168211368,0.891844088010353,0.329098041204242,0.304464949114599,0.23467170806371,0,0.220528398054962,0.8244312647074,0.645857706783622,0.422190474497091,1.3130957840345,0.656563598980245,0,0,0.512612642393558,1.65109494370578,0.555583582109135,0.376736914009382,0.410082683163076,0.915112692826091,0,0.279902904647316,0.138199973804424,0,0.474503990371703,0,0,0,0.655087691238533,0.674321731924103,0.41326727862668,0,0.129614973291793,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0,0.337912250981556,0.234714477291508,0,0,0.241584120826006,0,0.948033361884535,0.405450430580328,0.410843828659309,0.25984164595559,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0,0,0.100826185136841,0.194915761479505,0.192423683280659,0.233753804363138,0,0.443971906748129,0,0,0.579568782096571,0.750729901804728,0.73260649706906,0.857473516316263,0.501572104035363,0.564751842617067,0.460325236507177,0,0.859265911718438,0,0,0.675022500231806,0,0.453142408984205,0,1.14166082342594,0.399024873401031,0.853668028770671,0.972426868273176,0.838452650511929,0.367687016900028,0.888986911206461,0.618105171716683,0.64183841918363,0.505394423527595,0.50695859978048,0.188626341386076,0.655490552289177,0.384150914429216,0.516919220600519,0.476293691283074,0.231768651889711,1.15745532278223,0.824171801606613,0.147198920134397,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.376437521661322,0.423073039458382,0.182927972872773,0.263069711437843,0,1.12228454331548,0.474540072496697,0.591026894253381,0,0.309873682371932,0,0.999242311751784,0.701794825336225,0.214871054048298,0.191288332068843,0.661774257358546,0.927471342481686 | ||
|short_description=p@chr10:36857118..36857141,- | |short_description=p@chr10:36857118..36857141,- | ||
}} | }} |
Latest revision as of 08:24, 4 August 2015
Short description: | p@chr10:36857118..36857141, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:36857118..36857141, - |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.89e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.89e-09 | 23 |
somatic stem cell | 1.97e-09 | 91 |
multi fate stem cell | 1.97e-09 | 91 |
neural cell | 3.50e-09 | 43 |
electrically responsive cell | 4.12e-09 | 39 |
electrically active cell | 4.12e-09 | 39 |
monopoietic cell | 5.81e-09 | 4 |
myeloid leukocyte | 5.81e-09 | 4 |
phagocyte | 5.81e-09 | 4 |
monocyte | 5.81e-09 | 4 |
macrophage | 5.81e-09 | 4 |
tissue-resident macrophage | 5.81e-09 | 4 |
macrophage dendritic cell progenitor | 5.81e-09 | 4 |
monoblast | 5.81e-09 | 4 |
promonocyte | 5.81e-09 | 4 |
ectodermal cell | 6.98e-09 | 44 |
neurectodermal cell | 6.98e-09 | 44 |
embryonic cell | 8.23e-09 | 70 |
stem cell | 1.89e-08 | 97 |
neuron | 3.48e-08 | 33 |
neuronal stem cell | 3.48e-08 | 33 |
neuroblast | 3.48e-08 | 33 |
electrically signaling cell | 3.48e-08 | 33 |
epithelial cell of thymus | 6.90e-08 | 3 |
defensive cell | 2.95e-07 | 7 |
bone marrow cell | 6.80e-07 | 3 |
mesenchymal stem cell of the bone marrow | 6.80e-07 | 3 |
hippocampal neuron | 8.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 8.63e-10 | 5 |
gray matter of spinal cord | 8.63e-10 | 5 |
spinal cord | 4.34e-08 | 6 |
dorsal region element | 4.34e-08 | 6 |
dorsum | 4.34e-08 | 6 |
bone marrow | 4.16e-07 | 16 |