FFCP PHASE1:Mm9::chr4:116793891..116793923,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2264 | |MCL_coexpression_id=2264 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENSMUST00000153303_5end | |association_with_transcript=-21bp_to_ENSMUST00000153303_5end | ||
|cluster_id=chr4:116793891..116793923,- | |||
|description=CAGE_peak_2_at_ENSMUST00000153303_5end | |description=CAGE_peak_2_at_ENSMUST00000153303_5end | ||
|id=chr4:116793891..116793923,- | |id=chr4:116793891..116793923,- | ||
|ontology_enrichment_celltype=CL:0000988!3.48e-11!32;CL:0002032!3.48e-11!32;CL:0000037!3.48e-11!32;CL:0000566!3.48e-11!32;CL:0000837!3.48e-11!32;CL:0002031!1.08e-08!25;CL:0000838!2.06e-07!12;CL:0000542!2.99e-07!13;CL:0000051!2.99e-07!13;CL:0000084!4.91e-07!11;CL:0000827!4.91e-07!11 | |ontology_enrichment_celltype=CL:0000988!3.48e-11!32;CL:0002032!3.48e-11!32;CL:0000037!3.48e-11!32;CL:0000566!3.48e-11!32;CL:0000837!3.48e-11!32;CL:0002031!1.08e-08!25;CL:0000838!2.06e-07!12;CL:0000542!2.99e-07!13;CL:0000051!2.99e-07!13;CL:0000084!4.91e-07!11;CL:0000827!4.91e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,7.87e-12,32;CL:0002032,7.87e-12,32;CL:0000037,7.87e-12,32;CL:0000837,7.87e-12,32;CL:0002031,3.09e-09,25;CL:0000838,1.23e-07,12;CL:0000542,1.82e-07,13;CL:0000051,1.82e-07,13;CL:0000084,3.03e-07,11;CL:0000827,3.03e-07,11;CL:0000738,7.55e-07,17;CL:0002087,7.55e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.05e-16!45;UBERON:0003061!6.05e-16!45;UBERON:0002193!1.61e-15!48;UBERON:0004177!1.13e-11!29;UBERON:0002405!4.99e-10!70;UBERON:0002370!2.99e-09!23;UBERON:0000974!2.99e-09!23;UBERON:0004807!2.99e-09!23;UBERON:0005058!2.99e-09!23;UBERON:0003351!2.99e-09!23;UBERON:0009113!2.99e-09!23;UBERON:0003295!2.99e-09!23;UBERON:0009722!2.99e-09!23;UBERON:0005562!2.99e-09!23;UBERON:0007690!2.99e-09!23;UBERON:0006562!5.35e-09!24;UBERON:0001557!5.35e-09!24;UBERON:0001042!5.35e-09!24;UBERON:0008814!5.35e-09!24;UBERON:0009145!5.35e-09!24;UBERON:0003408!2.48e-08!24;UBERON:0000072!7.98e-07!27 | |ontology_enrichment_uberon=UBERON:0002390!6.05e-16!45;UBERON:0003061!6.05e-16!45;UBERON:0002193!1.61e-15!48;UBERON:0004177!1.13e-11!29;UBERON:0002405!4.99e-10!70;UBERON:0002370!2.99e-09!23;UBERON:0000974!2.99e-09!23;UBERON:0004807!2.99e-09!23;UBERON:0005058!2.99e-09!23;UBERON:0003351!2.99e-09!23;UBERON:0009113!2.99e-09!23;UBERON:0003295!2.99e-09!23;UBERON:0009722!2.99e-09!23;UBERON:0005562!2.99e-09!23;UBERON:0007690!2.99e-09!23;UBERON:0006562!5.35e-09!24;UBERON:0001557!5.35e-09!24;UBERON:0001042!5.35e-09!24;UBERON:0008814!5.35e-09!24;UBERON:0009145!5.35e-09!24;UBERON:0003408!2.48e-08!24;UBERON:0000072!7.98e-07!27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.77e-17,45;UBERON:0003061,8.77e-17,45;UBERON:0002193,4.29e-16,48;UBERON:0002405,4.29e-16,48;UBERON:0004177,2.34e-12,29;UBERON:0005057,2.34e-12,29;UBERON:0002370,7.77e-10,23;UBERON:0000974,7.77e-10,23;UBERON:0004807,7.77e-10,23;UBERON:0005058,7.77e-10,23;UBERON:0003351,7.77e-10,23;UBERON:0009113,7.77e-10,23;UBERON:0003295,7.77e-10,23;UBERON:0009722,7.77e-10,23;UBERON:0005562,7.77e-10,23;UBERON:0007690,7.77e-10,23;UBERON:0000077,1.17e-09,35;UBERON:0006562,1.45e-09,24;UBERON:0001557,1.45e-09,24;UBERON:0001042,1.45e-09,24;UBERON:0008814,1.45e-09,24;UBERON:0009145,1.45e-09,24;UBERON:0003408,7.05e-09,24;UBERON:0000072,2.00e-07,27 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,1.34303417529512,1.16806320297763,6.97265946584512,1.54867594366833,3.5109678948299,9.93064215707929,7.09972215058494,9.0736386863539,9.26656265641372,4.66353666541928,2.22722794128809,1.39912375625629,6.15151222448563,5.62169177783529,5.09267582157636,1.78590909317247,2.78014663362479,5.22399578277871,1.11994695955385,0.91763712426868,0.57423196411502,1.29228598847722,1.07735616342945,1.14014051673824,1.26015064879965,1.99557459589774,5.71527606113668,3.69038872550742,0,3.75507105676657,3.82339684324532,3.06254034393554,1.67412652294763,0.7813353445238,2.61761871986899,2.94115744015507,0.683045484958446,0.971020706062307,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.872100625521786,0.659058548203415,0.972149495371417,1.39986421625363,1.43752564364972,3.35565212115473,6.5282592781021,6.38578218370682,0.771778308107841,0.286533439938757,1.03134418455488,1.21389876515759,1.5869729378161,1.26766280701236,1.0165335962074,0,2.2497492932035,1.97773272513395,5.6838409195688,1.49800055259202,1.92109152660777,0.933206510776299,0.810035629990144,1.26194976810829,1.99955689082663,0.883474163806454,0.979926393719632,0.670918297127655,2.75765635983006,6.60695285996332,1.65993539510744,2.76491759861238,0.659431438650969,1.09785172322892,0.52091337055676,2.23346399201105,3.37657566019008,1.5279824777681,0.883885756421003,1.13897344639282,1.3047961207771,7.42116694665204,1.36028808192214,0.869593466105033,0.860423876981386,0.679971333707751,0.539703191637817,0,1.34408066129201,1.68533304158102,0.681721290312231,0,0,0,1.28326477414318,2.54805239706646,0,1.08245520505607,0.506719730950197,0.505524445014783,1.02765491747154,10.3575153458869,1.48442139064825,1.73485326766136,0.608930956624282,1.15307748628029,1.20578112442098,1.17588707135705,1.0053327306374,0,1.01219549843938,1.76922110389975,2.58826959915855,2.65009822152472,1.45462575940567,1.86391761218122,1.17112318804619,0,2.81002760729451,3.11519323715393,2.39961092397363,4.06624726633807,3.59497534571574,2.74500361691176,2.1361239859187,2.78118912307642,2.55715457330331,2.90903262383384,1.94689515681309,1.01839363850316,1.8661045591514,1.76905930903572,0.631325567659422,1.56144531555244,1.37941262660084,0.540186389416048,0.90422890701429,1.2246569847239,1.0249097622788,0.655912071918102,0.517406741478031,2.37124792226126,0.567318240503458,1.23165786914764,1.7535658594206,2.22437799380478,2.43776516565517,1.23469281844766,0.59710280045548,3.51106593656617,3.86021860672073,5.39910648851626,0.828503090142008,2.34526059981096,1.2604344302271,0.946978942340841,0.590292695242212,0.925602677324269,1.16266972375204,1.3413670069981,0.350296027101508,0.658239399653922,0.985004784474571,0.486412857275134,0.730999937126662,0.878200461164203,0.268412837520744,3.15434922846191,1.13195073617213,0.991256348951394,1.32225283331772,1.70630600428187,1.16118335930219,3.09281907173024,3.42861991859682,2.44615848229357,3.23383564391351,2.37264530772256,1.4822905925161,2.5133520880027,1.1937388322469,0.58489226135736,2.69645822596266,2.16138049874694,0.199141273254367,3.03468641524931,1.37098215131675,1.1270773567308,2.03651327845314,1.74557238450863,0.911765658574141,0.379419222745544,0.885660887877613,0.627994911365499,0.863780147452604,0.889357881261447,4.17112764290235,5.11053387294328,3.59779379815766,1.82574109249653,1.92941727801933,3.05551022137704,1.15078454980324,2.7562988551756,1.64736847912849,0,0.372140947668503,0.624075346229121,1.26289438973556,1.07638448113147,0.482443521363367,2.03228509183265,2.84237117655727,1.30371981153621,1.86719594352707,1.64283173801951,0.837531287209079,0.476087281772027,0.780534591431195,1.41871629695572,0.44292937929755,0.956728611944923,1.14704320301017,1.55416483679306,1.3018415272336,1.50791283939272,1.63171705145613,1.96705709207614,2.75936746304733,1.9266070798535,2.22702204525186,1.96721934452011,1.51482556322624,1.89304931649754,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,0.566153061577665,1.21443210502468,0.876767573733936,0.790575555893047,0.963963949265421,1.70328102249922,0.890328018336276,0.488660878060728,0.659880491890142,2.65490276679926,1.21390318077491,2.11626489875326,2.45186603682668,1.77181135728464,2.45948118355142,1.29214146584111,2.54473610634254,3.56497378384721,4.10847785316561,0,1.03135543248187,1.02131881726136,1.26042765821917,1.16422815404479,0.643011105094777,0.886701168211368,1.07021290561242,0.987294123612726,0.304464949114599,0.704015124191131,0.42366414172764,1.32317038832977,2.4732937941222,0.968786560175433,1.08563264870681,1.55184047204077,2.1338316966858,2.33184669303881,3.33765543618917,3.93003025835061,2.27025554759545,2.40752885580625,3.95573759709851,4.64760374251486,5.0331198105435,2.54967644990783,4.47844647435706,3.73139929271944,2.86401185404534,2.37251995185852,1.82987520414164,1.08005340821801,2.09088296014469,1.74690050996942,1.61837215661785,0.743881101528023,0.523511883968059,0.7776898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| |phase1_expression=0.160148847104794,0,0,0.30246421130683,0,1.34303417529512,1.16806320297763,6.97265946584512,1.54867594366833,3.5109678948299,9.93064215707929,7.09972215058494,9.0736386863539,9.26656265641372,4.66353666541928,2.22722794128809,1.39912375625629,6.15151222448563,5.62169177783529,5.09267582157636,1.78590909317247,2.78014663362479,5.22399578277871,1.11994695955385,0.91763712426868,0.57423196411502,1.29228598847722,1.07735616342945,1.14014051673824,1.26015064879965,1.99557459589774,5.71527606113668,3.69038872550742,0,3.75507105676657,3.82339684324532,3.06254034393554,1.67412652294763,0.7813353445238,2.61761871986899,2.94115744015507,0.683045484958446,0.971020706062307,0.251793635951155,0.202753862439029,0.550640256485045,0.782391344348039,0.872100625521786,0.659058548203415,0.972149495371417,1.39986421625363,1.43752564364972,3.35565212115473,6.5282592781021,6.38578218370682,0.771778308107841,0.286533439938757,1.03134418455488,1.21389876515759,1.5869729378161,1.26766280701236,1.0165335962074,0,2.2497492932035,1.97773272513395,5.6838409195688,1.49800055259202,1.92109152660777,0.933206510776299,0.810035629990144,1.26194976810829,1.99955689082663,0.883474163806454,0.979926393719632,0.670918297127655,2.75765635983006,6.60695285996332,1.65993539510744,2.76491759861238,0.659431438650969,1.09785172322892,0.52091337055676,2.23346399201105,3.37657566019008,1.5279824777681,0.883885756421003,1.13897344639282,1.3047961207771,7.42116694665204,1.36028808192214,0.869593466105033,0.860423876981386,0.679971333707751,0.539703191637817,0,1.34408066129201,1.68533304158102,0.681721290312231,0,0,0,1.28326477414318,2.54805239706646,0,1.08245520505607,0.506719730950197,0.505524445014783,1.02765491747154,10.3575153458869,1.48442139064825,1.73485326766136,0.608930956624282,1.15307748628029,1.20578112442098,1.17588707135705,1.0053327306374,0,1.01219549843938,1.76922110389975,2.58826959915855,2.65009822152472,1.45462575940567,1.86391761218122,1.17112318804619,0,2.81002760729451,3.11519323715393,2.39961092397363,4.06624726633807,3.59497534571574,2.74500361691176,2.1361239859187,2.78118912307642,2.55715457330331,2.90903262383384,1.94689515681309,1.01839363850316,1.8661045591514,1.76905930903572,0.631325567659422,1.56144531555244,1.37941262660084,0.540186389416048,0.90422890701429,1.2246569847239,1.0249097622788,0.655912071918102,0.517406741478031,2.37124792226126,0.567318240503458,1.23165786914764,1.7535658594206,2.22437799380478,2.43776516565517,1.23469281844766,0.59710280045548,3.51106593656617,3.86021860672073,5.39910648851626,0.828503090142008,2.34526059981096,1.2604344302271,0.946978942340841,0.590292695242212,0.925602677324269,1.16266972375204,1.3413670069981,0.350296027101508,0.658239399653922,0.985004784474571,0.486412857275134,0.730999937126662,0.878200461164203,0.268412837520744,3.15434922846191,1.13195073617213,0.991256348951394,1.32225283331772,1.70630600428187,1.16118335930219,3.09281907173024,3.42861991859682,2.44615848229357,3.23383564391351,2.37264530772256,1.4822905925161,2.5133520880027,1.1937388322469,0.58489226135736,2.69645822596266,2.16138049874694,0.199141273254367,3.03468641524931,1.37098215131675,1.1270773567308,2.03651327845314,1.74557238450863,0.911765658574141,0.379419222745544,0.885660887877613,0.627994911365499,0.863780147452604,0.889357881261447,4.17112764290235,5.11053387294328,3.59779379815766,1.82574109249653,1.92941727801933,3.05551022137704,1.15078454980324,2.7562988551756,1.64736847912849,0,0.372140947668503,0.624075346229121,1.26289438973556,1.07638448113147,0.482443521363367,2.03228509183265,2.84237117655727,1.30371981153621,1.86719594352707,1.64283173801951,0.837531287209079,0.476087281772027,0.780534591431195,1.41871629695572,0.44292937929755,0.956728611944923,1.14704320301017,1.55416483679306,1.3018415272336,1.50791283939272,1.63171705145613,1.96705709207614,2.75936746304733,1.9266070798535,2.22702204525186,1.96721934452011,1.51482556322624,1.89304931649754,0.780877488593277,0.215423397732799,0.955875191810208,1.11399337041197,0.566153061577665,1.21443210502468,0.876767573733936,0.790575555893047,0.963963949265421,1.70328102249922,0.890328018336276,0.488660878060728,0.659880491890142,2.65490276679926,1.21390318077491,2.11626489875326,2.45186603682668,1.77181135728464,2.45948118355142,1.29214146584111,2.54473610634254,3.56497378384721,4.10847785316561,0,1.03135543248187,1.02131881726136,1.26042765821917,1.16422815404479,0.643011105094777,0.886701168211368,1.07021290561242,0.987294123612726,0.304464949114599,0.704015124191131,0.42366414172764,1.32317038832977,2.4732937941222,0.968786560175433,1.08563264870681,1.55184047204077,2.1338316966858,2.33184669303881,3.33765543618917,3.93003025835061,2.27025554759545,2.40752885580625,3.95573759709851,4.64760374251486,5.0331198105435,2.54967644990783,4.47844647435706,3.73139929271944,2.86401185404534,2.37251995185852,1.82987520414164,1.08005340821801,2.09088296014469,1.74690050996942,1.61837215661785,0.743881101528023,0.523511883968059,0.7776898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| ||
|short_description=p2@ENSMUST00000153303 | |short_description=p2@ENSMUST00000153303 | ||
}} | }} |
Latest revision as of 15:02, 4 August 2015
Short description: | p2@ENSMUST00000153303 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000153303_5end |
Coexpression cluster: | MCL_coexpression_mm9:2264 |
Association with transcript: | -21bp_to_ENSMUST00000153303_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 7.87e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.87e-12 | 32 |
hematopoietic stem cell | 7.87e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.87e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 3.09e-09 | 25 |
lymphoid lineage restricted progenitor cell | 1.23e-07 | 12 |
lymphocyte | 1.82e-07 | 13 |
common lymphoid progenitor | 1.82e-07 | 13 |
T cell | 3.03e-07 | 11 |
pro-T cell | 3.03e-07 | 11 |
leukocyte | 7.55e-07 | 17 |
nongranular leukocyte | 7.55e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.77e-17 | 45 |
blood island | 8.77e-17 | 45 |
hemolymphoid system | 4.29e-16 | 48 |
immune system | 4.29e-16 | 48 |
hemopoietic organ | 2.34e-12 | 29 |
immune organ | 2.34e-12 | 29 |
thymus | 7.77e-10 | 23 |
neck | 7.77e-10 | 23 |
respiratory system epithelium | 7.77e-10 | 23 |
hemolymphoid system gland | 7.77e-10 | 23 |
pharyngeal epithelium | 7.77e-10 | 23 |
thymic region | 7.77e-10 | 23 |
pharyngeal gland | 7.77e-10 | 23 |
entire pharyngeal arch endoderm | 7.77e-10 | 23 |
thymus primordium | 7.77e-10 | 23 |
early pharyngeal endoderm | 7.77e-10 | 23 |
mixed endoderm/mesoderm-derived structure | 1.17e-09 | 35 |
pharynx | 1.45e-09 | 24 |
upper respiratory tract | 1.45e-09 | 24 |
chordate pharynx | 1.45e-09 | 24 |
pharyngeal arch system | 1.45e-09 | 24 |
pharyngeal region of foregut | 1.45e-09 | 24 |
gland of gut | 7.05e-09 | 24 |
segment of respiratory tract | 2.00e-07 | 27 |