FFCP PHASE1:Mm9::chr17:3462365..3462373,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:3462365..3462373,- to FFCP PHASE1:Mm9::chr17:3462365..3462373,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2207 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:3462365..3462373,- | |||
|description=CAGE_peak_at_chr17:3462365..3462373,- | |||
|id=chr17:3462365..3462373,- | |||
|ontology_enrichment_celltype=CL:0002320!2.42e-13!46;CL:0000134!2.42e-13!46;CL:0000219!5.17e-13!54;CL:0000988!3.26e-12!32;CL:0002032!3.26e-12!32;CL:0000037!3.26e-12!32;CL:0000566!3.26e-12!32;CL:0000837!3.26e-12!32;CL:0002031!4.23e-12!25;CL:0000738!6.77e-11!17;CL:0002087!6.77e-11!17;CL:0000063!7.18e-09!66;CL:0000838!7.62e-09!12;CL:0000542!1.30e-08!13;CL:0000051!1.30e-08!13;CL:0000084!3.20e-08!11;CL:0000827!3.20e-08!11;CL:0000548!2.35e-07!115;CL:0000004!2.35e-07!115;CL:0000255!2.35e-07!115;CL:0000034!4.14e-07!97;CL:0000791!4.57e-07!9;CL:0000789!4.57e-07!9;CL:0002420!4.57e-07!9;CL:0002419!4.57e-07!9;CL:0000790!4.57e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,2.30e-14,46;CL:0000134,2.30e-14,46;CL:0000219,1.19e-13,54;CL:0000988,3.65e-13,32;CL:0002032,3.65e-13,32;CL:0000037,3.65e-13,32;CL:0000837,3.65e-13,32;CL:0002031,3.68e-13,25;CL:0000738,1.94e-11,17;CL:0002087,1.94e-11,17;CL:0000838,2.87e-09,12;CL:0000542,5.04e-09,13;CL:0000051,5.04e-09,13;CL:0000084,1.31e-08,11;CL:0000827,1.31e-08,11;CL:0000034,2.22e-08,97;CL:0000723,1.72e-07,91;CL:0000048,1.72e-07,91;CL:0000791,2.18e-07,9;CL:0000789,2.18e-07,9;CL:0002420,2.18e-07,9;CL:0002419,2.18e-07,9;CL:0000790,2.18e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.42e-13!46;UBERON:0002193!1.22e-09!48;UBERON:0002390!9.03e-09!45;UBERON:0003061!9.03e-09!45;UBERON:0002371!2.32e-07!16;UBERON:0003081!6.17e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-14,46;UBERON:0002193,1.83e-10,48;UBERON:0002405,1.83e-10,48;UBERON:0002390,1.55e-09,45;UBERON:0003061,1.55e-09,45;UBERON:0002371,1.25e-07,16;UBERON:0003081,8.75e-07,87 | |||
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|phase1_expression=0,1.39590163055744,0.909998478779072,0.30246421130683,2.00358291978539,0.671517087647559,1.86890112476421,5.16493293766305,8.72890077340334,5.14941957908386,5.13653904676515,3.5099749957948,5.82082481766099,4.72070173062586,2.6648780945253,3.03712901084739,3.49780939064073,6.62470547252299,4.9361196098066,8.48779303596061,0.765389611359628,5.95745707205312,3.39559725880616,3.35984087866154,2.06468352960453,1.72269589234506,1.29228598847722,0.646413698057667,2.66032787238923,0.252030129759931,0.665191531965914,2.54012269383853,0.61506478758457,0,0.577703239502549,2.32728503501889,1.63335485009895,0,0.7813353445238,0,0.588231488031014,0,0,1.6366586336825,1.72340783073175,2.38610777810186,3.9119567217402,0,1.09843091367236,0.972149495371417,0.979904951377538,2.87505128729943,5.36904339384756,5.80289713609076,7.39406358113421,1.02903774414379,2.29226751951005,2.06268836910977,1.21389876515759,0.528990979272033,0.633831403506179,3.38844532069132,3.55717918444456,2.6996991518442,4.94433181283487,7.104801149461,3.29560121570245,5.37905627450176,1.45165457231869,2.02508907497536,2.94454945891935,1.14260393761521,0.662605622854841,1.71487118900936,0.766763768145891,0.919218786610021,0,0.638436690425939,0.153606533256243,1.45074916503213,0.731901148819277,1.56274011167028,0.558365998002762,0,1.22238598221448,1.47314292736834,1.42371680799103,1.1183966749518,2.04460721999597,3.09843396437821,2.31891590961342,0.860423876981386,0.679971333707751,0,0.649776417447669,1.34408066129201,0.842666520790511,2.72688516124892,4.93593408745451,2.82671659608272,0.704217098883403,1.28326477414318,0,0,1.73192832808971,2.78695852022608,1.51657333504435,1.02765491747154,1.8125651855302,1.03909497345377,2.4287945747259,0.913396434936424,0.922461989024234,0.904335843315735,1.29347577849275,1.13099932196708,0.988779870937496,1.15679485535929,0.884610551949874,0.647067399789637,0.883366073841574,3.87900202508178,0,0.292780797011547,0,1.27728527604296,1.91704199209472,5.39912457894067,3.04968544975355,0.898743836428936,0,1.38219787324151,0.347648640384553,0,0.41557608911912,0.648965052271031,1.2220723662038,1.11966273549084,2.0217820674694,1.05220927943237,1.43132487258974,1.83921683546778,1.80062129805349,1.9591626318643,0.884474488967262,0.512454881139399,0.937017245597288,0,2.15567992932842,0.756424320671277,1.93546236580344,1.97276159184817,1.11218899690239,0.348252166522167,1.02891068203972,1.99034266818493,0.702213187313235,1.02939162845886,2.27330799516474,0.828503090142008,2.11073453982987,1.44049649168812,1.18372367792605,1.77087808572663,1.54267112887378,0.930135779001631,1.3413670069981,1.16765342367169,1.31647879930784,1.47750717671186,0.648550476366846,1.75439984910399,0.658650345873152,2.14730270016595,0.420579897128254,0.514523061896422,0.660837565967596,1.05780226665418,1.49301775374664,1.39342003116263,1.28867461322093,1.21010114774006,1.77902435075896,1.14135375667535,1.42358718463353,0.988193728344065,0.502670417600539,2.38747766449381,0.779856348476481,0,0.648414149624083,1.1948476395262,2.27601481143698,1.5994791765362,2.25415471346161,1.62921062276251,1.35766741017338,1.75339549725796,1.01178459398812,0.147610147979602,0.627994911365499,0.863780147452604,0.592905254174298,1.00107063429656,1.57247196090562,1.12431056192427,1.42002084971952,2.17059443777175,1.2731292589071,2.01387296215567,1.78348749452539,1.64736847912849,0,1.11642284300551,1.24815069245824,1.01031551178845,0.717589654087649,0.964887042726734,0.923765950833023,0.947457058852424,1.30371981153621,0.678980343100753,0.938760993154008,1.50755631697634,0.714130922658041,0.780534591431195,0.630540576424764,1.32878813789265,0.797273843287435,0.81931657357869,0.863424909329478,1.01254341007058,6.03165135757089,3.26343410291226,0.983528546038072,0.551873492609465,0.642202359951168,0.234423373184406,7.21313759657372,0.252470927204373,3.47059041357882,1.56175497718655,1.50796378412959,1.91175038362042,2.22798674082394,0.849229592366497,1.21443210502468,0.584511715822624,0.395287777946524,0.321321316421807,0.99358059645788,1.78065603667255,2.60619134965722,1.48473110675282,1.32745138339963,0.728341908464944,2.11626489875326,1.69744571780308,1.18120757152309,2.76691633149535,0.516856586336442,1.81766864738753,2.49548164869305,2.21225730555071,4.21674434299995,5.15677716240934,0.680879211507576,1.8006109403131,1.81102157295856,0.643011105094777,0.532020700926821,0.713475270408282,2.13913726782757,2.13125464380219,0.704015124191131,0.63549621259146,0.882113592219848,1.48397627647332,1.29171541356724,1.08563264870681,2.38744688006273,1.14898629821543,0.874442509889552,0.370850604021019,2.05045056957423,2.27025554759545,0.925972636848558,1.31857919903284,1.0935538217682,1.83022538565218,1.01987057996313,1.95932033253121,1.10559979043539,2.86401185404534,0.790839983952838,1.82987520414164,1.29606408986162,0.836353184057875,2.18362563746178,0.674321731924103,0.826534557253359,1.57053565190418,1.68499465279331,0,1.69107881605257,1.34564891439581,1.9855018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| ||
|short_description=p@chr17:3462365..3462373,- | |||
}} | }} |
Latest revision as of 17:26, 4 August 2015
Short description: | p@chr17:3462365..3462373, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:3462365..3462373, - |
Coexpression cluster: | MCL_coexpression_mm9:2207 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 2.30e-14 | 46 |
mesenchymal cell | 2.30e-14 | 46 |
motile cell | 1.19e-13 | 54 |
hematopoietic cell | 3.65e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.65e-13 | 32 |
hematopoietic stem cell | 3.65e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.65e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 3.68e-13 | 25 |
leukocyte | 1.94e-11 | 17 |
nongranular leukocyte | 1.94e-11 | 17 |
lymphoid lineage restricted progenitor cell | 2.87e-09 | 12 |
lymphocyte | 5.04e-09 | 13 |
common lymphoid progenitor | 5.04e-09 | 13 |
T cell | 1.31e-08 | 11 |
pro-T cell | 1.31e-08 | 11 |
stem cell | 2.22e-08 | 97 |
somatic stem cell | 1.72e-07 | 91 |
multi fate stem cell | 1.72e-07 | 91 |
mature alpha-beta T cell | 2.18e-07 | 9 |
alpha-beta T cell | 2.18e-07 | 9 |
immature T cell | 2.18e-07 | 9 |
mature T cell | 2.18e-07 | 9 |
immature alpha-beta T cell | 2.18e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.30e-14 | 46 |
hemolymphoid system | 1.83e-10 | 48 |
immune system | 1.83e-10 | 48 |
hematopoietic system | 1.55e-09 | 45 |
blood island | 1.55e-09 | 45 |
bone marrow | 1.25e-07 | 16 |
lateral plate mesoderm | 8.75e-07 | 87 |