FFCP PHASE1:Mm9::chr1:135811198..135811208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=447 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:135811198..135811208,- | |||
|description=CAGE_peak_at_chr1:135811198..135811208,- | |description=CAGE_peak_at_chr1:135811198..135811208,- | ||
|id=chr1:135811198..135811208,- | |id=chr1:135811198..135811208,- | ||
|ontology_enrichment_celltype=CL:0000680!1.27e-08!6;CL:0000183!1.27e-08!6;CL:0000187!1.27e-08!6;CL:0000056!1.27e-08!6;CL:0000222!3.59e-07!7 | |ontology_enrichment_celltype=CL:0000680!1.27e-08!6;CL:0000183!1.27e-08!6;CL:0000187!1.27e-08!6;CL:0000056!1.27e-08!6;CL:0000222!3.59e-07!7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.15e-36,6;CL:0000187,1.15e-36,6;CL:0000056,1.15e-36,6;CL:0000222,1.78e-31,7;CL:0000192,2.53e-27,3;CL:0000359,2.53e-27,3;CL:0002539,2.53e-27,3;CL:0000514,2.53e-27,3;CL:0000355,1.51e-24,9;CL:0002605,5.72e-19,2;CL:0002604,5.72e-19,2;CL:0002494,1.63e-12,3;CL:0000737,1.63e-12,3;CL:0000746,1.63e-12,3;CL:0000513,1.63e-12,3;CL:0002453,1.39e-10,8;CL:0002321,9.06e-10,70;CL:0000333,1.39e-08,10;CL:0000095,1.39e-08,10;CL:0000243,1.39e-08,10;CL:0000123,1.39e-08,10;CL:0000125,1.39e-08,10;CL:0000030,1.39e-08,10;CL:0000339,1.39e-08,10;CL:0000128,6.12e-07,6;CL:0000126,6.12e-07,6;CL:0000127,6.12e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,2.53e-27,3;UBERON:0004237,2.53e-27,3;UBERON:0004695,2.53e-27,3;UBERON:0002111,2.53e-27,3;UBERON:0004178,2.53e-27,3;UBERON:0001134,1.51e-24,9;UBERON:0002036,1.51e-24,9;UBERON:0002385,1.51e-24,9;UBERON:0000486,1.51e-24,9;UBERON:0007503,1.51e-24,9;UBERON:0001015,1.51e-24,9;UBERON:0002329,1.51e-24,9;UBERON:0003082,1.51e-24,9;UBERON:0003059,1.51e-24,9;UBERON:0007282,1.51e-24,9;UBERON:0004290,1.51e-24,9;UBERON:0009618,1.51e-24,9;UBERON:0000383,4.06e-22,10;UBERON:0000947,1.09e-20,4;UBERON:0001637,1.09e-20,4;UBERON:0004573,1.09e-20,4;UBERON:0003509,1.09e-20,4;UBERON:0004571,1.09e-20,4;UBERON:0010191,1.09e-20,4;UBERON:0004572,1.09e-20,4;UBERON:0007524,3.97e-20,11;UBERON:0003077,3.97e-20,11;UBERON:0007285,3.97e-20,11;UBERON:0000055,1.07e-16,5;UBERON:0007500,1.07e-16,5;UBERON:0001981,1.07e-16,5;UBERON:0002049,1.07e-16,5;UBERON:0007798,1.07e-16,5;UBERON:0004537,1.07e-16,5;UBERON:0006965,1.07e-16,5;UBERON:0002204,9.08e-10,32;UBERON:0004535,1.07e-09,23;UBERON:0001009,1.07e-09,23;UBERON:0004872,9.08e-07,33 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,5.06884656097573,1.46837401729345,0,0.436050312760893,3.73466510648602,6.22175677037707,0.279972843250725,0,0,0,0,0.771778308107841,1.43266719969378,1.54701627683233,0,0,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.70667914902068,0,3.84979432242953,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.86759614151947,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.16894408080329,5.06884656097573,1.46837401729345,0,0.436050312760893,3.73466510648602,6.22175677037707,0.279972843250725,0,0,0,0,0.771778308107841,1.43266719969378,1.54701627683233,0,0,0,0,0,0.449949858640699,0,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,1.02258193546835,0.259786004602869,0.70667914902068,0,3.84979432242953,0,0,0,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0.86759614151947,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.248813941220186,0,0.210441855886474,0,0,0,0.150704817835715,0,0,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0.549122826376163,0,0.372140947668503,0,0,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0,0,0,0,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.322928853391811,0.180938774784468,0,0.164140899745061,0.291480836629851,0.18542530201051,0.341741761595705,0,0,0.188368457004691,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0.386379188064381,0.750729901804728,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0.233931608445408,0.214871054048298,0.765153328275374,0.220591419119515,0.463735671240843 | ||
|short_description=p@chr1:135811198..135811208,- | |short_description=p@chr1:135811198..135811208,- | ||
}} | }} |
Latest revision as of 19:45, 4 August 2015
Short description: | p@chr1:135811198..135811208, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:135811198..135811208, - |
Coexpression cluster: | MCL_coexpression_mm9:447 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.15e-36 | 6 |
muscle cell | 1.15e-36 | 6 |
myoblast | 1.15e-36 | 6 |
mesodermal cell | 1.78e-31 | 7 |
smooth muscle cell | 2.53e-27 | 3 |
vascular associated smooth muscle cell | 2.53e-27 | 3 |
aortic smooth muscle cell | 2.53e-27 | 3 |
smooth muscle myoblast | 2.53e-27 | 3 |
multi-potent skeletal muscle stem cell | 1.51e-24 | 9 |
astrocyte of the cerebral cortex | 5.72e-19 | 2 |
astrocyte of the hippocampus | 5.72e-19 | 2 |
cardiocyte | 1.63e-12 | 3 |
striated muscle cell | 1.63e-12 | 3 |
cardiac muscle cell | 1.63e-12 | 3 |
cardiac muscle myoblast | 1.63e-12 | 3 |
oligodendrocyte precursor cell | 1.39e-10 | 8 |
embryonic cell | 9.06e-10 | 70 |
migratory neural crest cell | 1.39e-08 | 10 |
neuron associated cell | 1.39e-08 | 10 |
glial cell (sensu Vertebrata) | 1.39e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 1.39e-08 | 10 |
glial cell | 1.39e-08 | 10 |
glioblast | 1.39e-08 | 10 |
glioblast (sensu Vertebrata) | 1.39e-08 | 10 |
oligodendrocyte | 6.12e-07 | 6 |
macroglial cell | 6.12e-07 | 6 |
astrocyte | 6.12e-07 | 6 |