FFCP PHASE1:Mm9::chr4:134119282..134119305,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2398 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:134119282..134119305,- | |||
|description=CAGE_peak_at_chr4:134119282..134119305,- | |description=CAGE_peak_at_chr4:134119282..134119305,- | ||
|id=chr4:134119282..134119305,- | |id=chr4:134119282..134119305,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.97e-13!102;UBERON:0000924!4.97e-13!102;UBERON:0006601!4.97e-13!102;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0000073!1.07e-08!75;UBERON:0001016!1.07e-08!75;UBERON:0001017!1.45e-08!73;UBERON:0005743!1.45e-08!73;UBERON:0004111!2.02e-08!122;UBERON:0000033!2.28e-08!63;UBERON:0003103!1.28e-07!43;UBERON:0007100!3.88e-07!18;UBERON:0000948!3.88e-07!18;UBERON:0005498!3.88e-07!18;UBERON:0004140!3.88e-07!18;UBERON:0009881!3.88e-07!18;UBERON:0004141!3.88e-07!18;UBERON:0003084!3.88e-07!18;UBERON:0007005!3.88e-07!18;UBERON:0004139!3.88e-07!18;UBERON:0004291!3.88e-07!18;UBERON:0000025!5.06e-07!114 | |ontology_enrichment_uberon=UBERON:0004121!4.97e-13!102;UBERON:0000924!4.97e-13!102;UBERON:0006601!4.97e-13!102;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0000073!1.07e-08!75;UBERON:0001016!1.07e-08!75;UBERON:0001017!1.45e-08!73;UBERON:0005743!1.45e-08!73;UBERON:0004111!2.02e-08!122;UBERON:0000033!2.28e-08!63;UBERON:0003103!1.28e-07!43;UBERON:0007100!3.88e-07!18;UBERON:0000948!3.88e-07!18;UBERON:0005498!3.88e-07!18;UBERON:0004140!3.88e-07!18;UBERON:0009881!3.88e-07!18;UBERON:0004141!3.88e-07!18;UBERON:0003084!3.88e-07!18;UBERON:0007005!3.88e-07!18;UBERON:0004139!3.88e-07!18;UBERON:0004291!3.88e-07!18;UBERON:0000025!5.06e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.82e-16,92;UBERON:0004121,8.69e-10,95;UBERON:0000924,8.69e-10,95;UBERON:0006601,8.69e-10,95;UBERON:0007100,4.04e-08,18;UBERON:0000948,4.04e-08,18;UBERON:0005498,4.04e-08,18;UBERON:0004140,4.04e-08,18;UBERON:0009881,4.04e-08,18;UBERON:0004141,4.04e-08,18;UBERON:0003084,4.04e-08,18;UBERON:0007005,4.04e-08,18;UBERON:0004139,4.04e-08,18;UBERON:0004291,4.04e-08,18;UBERON:0002346,6.22e-08,64;UBERON:0003075,6.22e-08,64;UBERON:0007284,6.22e-08,64;UBERON:0001017,6.95e-08,73;UBERON:0001016,7.73e-08,75;UBERON:0010371,1.48e-07,73;UBERON:0003103,2.35e-07,43;UBERON:0004111,2.45e-07,122;UBERON:0005423,2.91e-07,304;UBERON:0000073,2.96e-07,54 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.524522414513984,0.666219523631325,0.202475267389826,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,2.51118978442145,1.5626706890476,2.61761871986899,3.52938892818609,4.78131839470912,2.42755176515577,0.377690453926732,0.709638518536602,0,3.12956537739216,8.93903141159831,1.09843091367236,1.36100929351998,4.89952475688769,4.31257693094915,0,0,0,7.97504251711436,4.01146815914259,4.64104883049698,0.404632921719196,1.05798195854407,0.633831403506179,2.03306719241479,3.55717918444456,13.0485459005803,11.8663963508037,17.0515227587064,14.081205194365,13.0634223809329,0.829516898467821,0.675029691658453,1.26194976810829,2.85650984403804,2.42955395046775,0,1.53352753629178,0.919218786610021,1.10115880999389,2.68143409978894,3.99376986466233,0.263772575460388,1.64677758484337,0,3.07101298901519,1.68828783009504,2.75036845998258,3.53554302568401,2.70506193518296,1.3047961207771,0.757261933331841,2.34271836331035,1.73918693221007,0,0,0,0,0,0.702222100658759,6.13549161281008,4.93593408745451,6.36011234118612,2.53518155598025,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0.45673551887624,0,0.890652834388949,2.60227990149204,1.82679286987285,1.38369298353635,3.16517545160507,2.93971767839262,2.13633205260448,2.96633961281249,0.86759614151947,2.65383165584962,5.66183974815932,3.5334642953663,1.93950101254089,0,2.04946557908083,3.77004072264219,0.255457055208591,0.599075622529601,0,1.39777249780371,1.04853447583376,0.457500602818626,1.00523481690292,1.56441888173049,3.58001640262463,1.0389402227978,1.29793010454206,3.05518091550949,0.995255764880744,0.505445516867349,3.57751155007006,1.30120442962704,0.459804208866946,1.62055916824814,2.71268672104287,2.65342346690179,2.3060469651273,2.24884138943349,5.17406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,3.05851974148158,1.74126083261083,1.02891068203972,1.59227413454795,1.40442637462647,0,0,1.44988040774851,2.57978665979206,3.42117916775928,1.42046841351126,2.36117078096885,2.93107514486019,2.32533944750408,1.07309360559848,3.73649095574942,4.27855609775049,6.40253109908471,1.78351381000883,2.04679982395465,2.85415149878366,2.41571553768669,1.89260953707715,2.26390147234426,0,0,1.06644125267617,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,0.198956472041151,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.25673363870702,2.25415471346161,2.03651327845314,1.93952487167626,1.96380295692892,1.70738650235495,0.590440591918409,1.255989822731,0.863780147452604,0.889357881261447,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,1.92192989231657,27.3159592401974,1.86070473834252,0.624075346229121,1.01031551178845,0,0.482443521363367,1.66277871149944,0.757965647081939,0.814824882210129,0.339490171550376,0.938760993154008,0.502518772325447,0.952174563544055,2.53673742215138,1.89162172927429,0.8858587585951,4.30527875375215,3.60499292374624,1.72684981865896,2.16973587872267,10.5553898757491,17.4049818821987,3.93411418415229,2.75936746304733,0.80275294993896,1.87538698547525,0.163934945376675,1.26235463602186,0.94652465824877,1.17131623288992,1.93881057959519,0.477937595905104,1.33679204449436,1.98153571552183,1.21443210502468,2.33804686329049,0.395287777946524,0.963963949265421,1.13552068166615,1.95872164033981,2.11753047159649,1.15479086080775,0,0.485561272309963,0.906970670894253,1.32023555829129,0.590603785761546,0,1.29214146584111,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,0,0.680879211507576,1.62054984628179,0.905510786479282,2.35770738534752,1.06404140185364,2.31879462882692,3.45552943264454,1.2178597964584,1.64270195644597,5.50763384245932,3.52845436887939,0.65954501176592,0.807322133479528,0.904693873922338,0.477489376012546,0.492422699235184,0,0.556275906031529,0.170870880797853,0.82554747185289,3.33350149265481,1.50694765603753,0.136694227721025,0.457556346413045,0.679913719975421,0.559805809294632,0.829199842826543,1.90934123603023,0,0,0.756037385752609,0.209088296014469,0.218362563746178,1.07891477107857,1.40510874733071,1.04702376793612,0.777689839750757,3.72803587852155,0,0.299033092087958,1.15820943319968,1.94451188344048,1.03327858782185,2.53434188236167,2.22978753426933,1.8228613878153,0.629156066554265,0.241584120826006,0.576060012515731,0,1.82452693761148,1.1298205288131,0.389762468933385,0.537080087002444,0.79472541912506,0.240390899039938,0.443068581523732,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.384847366561318,0.116876902181569,0.680191150845634,1.99787358036658,0.358855426437903,1.84673078000486,1.35232715822533,0.93841237725591,0.915758121336325,0.643105137237198,10.0314420807073,1.12950368523413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|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0.524522414513984,0.666219523631325,0.202475267389826,0,0,0,0.42438965179803,0.425216450755349,0,0,0,0.22940928106717,0,0,0,0,0,0,0,1.23012957516914,0,0,0,0,2.51118978442145,1.5626706890476,2.61761871986899,3.52938892818609,4.78131839470912,2.42755176515577,0.377690453926732,0.709638518536602,0,3.12956537739216,8.93903141159831,1.09843091367236,1.36100929351998,4.89952475688769,4.31257693094915,0,0,0,7.97504251711436,4.01146815914259,4.64104883049698,0.404632921719196,1.05798195854407,0.633831403506179,2.03306719241479,3.55717918444456,13.0485459005803,11.8663963508037,17.0515227587064,14.081205194365,13.0634223809329,0.829516898467821,0.675029691658453,1.26194976810829,2.85650984403804,2.42955395046775,0,1.53352753629178,0.919218786610021,1.10115880999389,2.68143409978894,3.99376986466233,0.263772575460388,1.64677758484337,0,3.07101298901519,1.68828783009504,2.75036845998258,3.53554302568401,2.70506193518296,1.3047961207771,0.757261933331841,2.34271836331035,1.73918693221007,0,0,0,0,0,0.702222100658759,6.13549161281008,4.93593408745451,6.36011234118612,2.53518155598025,0,0,0,0.649473123033642,1.52015919285059,1.01104889002957,0.45673551887624,0,0.890652834388949,2.60227990149204,1.82679286987285,1.38369298353635,3.16517545160507,2.93971767839262,2.13633205260448,2.96633961281249,0.86759614151947,2.65383165584962,5.66183974815932,3.5334642953663,1.93950101254089,0,2.04946557908083,3.77004072264219,0.255457055208591,0.599075622529601,0,1.39777249780371,1.04853447583376,0.457500602818626,1.00523481690292,1.56441888173049,3.58001640262463,1.0389402227978,1.29793010454206,3.05518091550949,0.995255764880744,0.505445516867349,3.57751155007006,1.30120442962704,0.459804208866946,1.62055916824814,2.71268672104287,2.65342346690179,2.3060469651273,2.24884138943349,5.17406741478031,0.215567992932842,0.378212160335639,0.527853372491847,0.219195732427575,3.05851974148158,1.74126083261083,1.02891068203972,1.59227413454795,1.40442637462647,0,0,1.44988040774851,2.57978665979206,3.42117916775928,1.42046841351126,2.36117078096885,2.93107514486019,2.32533944750408,1.07309360559848,3.73649095574942,4.27855609775049,6.40253109908471,1.78351381000883,2.04679982395465,2.85415149878366,2.41571553768669,1.89260953707715,2.26390147234426,0,0,1.06644125267617,0.696710015581316,0.515469845288373,1.00841762311671,0.444756087689741,0.570676878337677,0.474529061544512,0.823494773620054,1.00534083520108,0.198956472041151,0.779856348476481,0.898819408654221,0.432276099749388,0.398282546508734,0.189667900953082,1.25673363870702,2.25415471346161,2.03651327845314,1.93952487167626,1.96380295692892,1.70738650235495,0.590440591918409,1.255989822731,0.863780147452604,0.889357881261447,0.333690211432188,0.393117990226406,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.648540907100142,1.92192989231657,27.3159592401974,1.86070473834252,0.624075346229121,1.01031551178845,0,0.482443521363367,1.66277871149944,0.757965647081939,0.814824882210129,0.339490171550376,0.938760993154008,0.502518772325447,0.952174563544055,2.53673742215138,1.89162172927429,0.8858587585951,4.30527875375215,3.60499292374624,1.72684981865896,2.16973587872267,10.5553898757491,17.4049818821987,3.93411418415229,2.75936746304733,0.80275294993896,1.87538698547525,0.163934945376675,1.26235463602186,0.94652465824877,1.17131623288992,1.93881057959519,0.477937595905104,1.33679204449436,1.98153571552183,1.21443210502468,2.33804686329049,0.395287777946524,0.963963949265421,1.13552068166615,1.95872164033981,2.11753047159649,1.15479086080775,0,0.485561272309963,0.906970670894253,1.32023555829129,0.590603785761546,0,1.29214146584111,0.727067458955011,1.78248689192361,1.26414703174326,1.05418608574999,0,0.680879211507576,1.62054984628179,0.905510786479282,2.35770738534752,1.06404140185364,2.31879462882692,3.45552943264454,1.2178597964584,1.64270195644597,5.50763384245932,3.52845436887939,0.65954501176592,0.807322133479528,0.904693873922338,0.477489376012546,0.492422699235184,0,0.556275906031529,0.170870880797853,0.82554747185289,3.33350149265481,1.50694765603753,0.136694227721025,0.457556346413045,0.679913719975421,0.559805809294632,0.829199842826543,1.90934123603023,0,0,0.756037385752609,0.209088296014469,0.218362563746178,1.07891477107857,1.40510874733071,1.04702376793612,0.777689839750757,3.72803587852155,0,0.299033092087958,1.15820943319968,1.94451188344048,1.03327858782185,2.53434188236167,2.22978753426933,1.8228613878153,0.629156066554265,0.241584120826006,0.576060012515731,0,1.82452693761148,1.1298205288131,0.389762468933385,0.537080087002444,0.79472541912506,0.240390899039938,0.443068581523732,0.100966449948148,0.0762068066549998,0.201652370273681,0.194915761479505,0.384847366561318,0.116876902181569,0.680191150845634,1.99787358036658,0.358855426437903,1.84673078000486,1.35232715822533,0.93841237725591,0.915758121336325,0.643105137237198,10.0314420807073,1.12950368523413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| ||
|short_description=p@chr4:134119282..134119305,- | |short_description=p@chr4:134119282..134119305,- | ||
}} | }} |
Latest revision as of 22:45, 4 August 2015
Short description: | p@chr4:134119282..134119305, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:134119282..134119305, - |
Coexpression cluster: | MCL_coexpression_mm9:2398 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.82e-16 | 92 |
ectoderm-derived structure | 8.69e-10 | 95 |
ectoderm | 8.69e-10 | 95 |
presumptive ectoderm | 8.69e-10 | 95 |
primary circulatory organ | 4.04e-08 | 18 |
heart | 4.04e-08 | 18 |
primitive heart tube | 4.04e-08 | 18 |
primary heart field | 4.04e-08 | 18 |
anterior lateral plate mesoderm | 4.04e-08 | 18 |
heart tube | 4.04e-08 | 18 |
heart primordium | 4.04e-08 | 18 |
cardiac mesoderm | 4.04e-08 | 18 |
cardiogenic plate | 4.04e-08 | 18 |
heart rudiment | 4.04e-08 | 18 |
neurectoderm | 6.22e-08 | 64 |
neural plate | 6.22e-08 | 64 |
presumptive neural plate | 6.22e-08 | 64 |
central nervous system | 6.95e-08 | 73 |
nervous system | 7.73e-08 | 75 |
ecto-epithelium | 1.48e-07 | 73 |
compound organ | 2.35e-07 | 43 |
anatomical conduit | 2.45e-07 | 122 |
developing anatomical structure | 2.91e-07 | 304 |
regional part of nervous system | 2.96e-07 | 54 |