FFCP PHASE1:Mm9::chr12:41987641..41987645,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:41987641..41987645,+ to FFCP PHASE1:Mm9::chr12:41987641..41987645,+: NSchange) |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:41987641..41987645,+ | |||
|description=CAGE_peak_at_chr12:41987641..41987645,+ | |||
|id=chr12:41987641..41987645,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.13e-14!66;CL:0000144!6.35e-14!121;CL:0000012!6.35e-14!121;CL:0002031!3.07e-13!25;CL:0000988!3.67e-13!32;CL:0002032!3.67e-13!32;CL:0000037!3.67e-13!32;CL:0000566!3.67e-13!32;CL:0000837!3.67e-13!32;CL:0000548!6.58e-13!115;CL:0000004!6.58e-13!115;CL:0000255!6.58e-13!115;CL:0002371!2.17e-12!118;CL:0000791!1.51e-11!9;CL:0000789!1.51e-11!9;CL:0002420!1.51e-11!9;CL:0002419!1.51e-11!9;CL:0000790!1.51e-11!9;CL:0000838!3.91e-11!12;CL:0000542!3.65e-10!13;CL:0000051!3.65e-10!13;CL:0000624!8.78e-10!8;CL:0000219!1.06e-09!54;CL:0000738!1.43e-09!17;CL:0002087!1.43e-09!17;CL:0002320!1.86e-09!46;CL:0000134!1.86e-09!46;CL:0000893!2.64e-09!6;CL:0002489!2.64e-09!6;CL:0000898!2.64e-09!6;CL:0000809!2.64e-09!6;CL:0000810!2.64e-09!6;CL:0000895!2.64e-09!6;CL:0000808!2.64e-09!6;CL:0000894!2.64e-09!6;CL:0000806!2.64e-09!6;CL:0000807!2.64e-09!6;CL:0000805!2.64e-09!6;CL:0002425!2.64e-09!6;CL:0002436!2.64e-09!6;CL:0002427!2.64e-09!6;CL:0002428!2.64e-09!6;CL:0002429!2.64e-09!6;CL:0002433!2.64e-09!6;CL:0002431!2.64e-09!6;CL:0002432!2.64e-09!6;CL:0000084!3.04e-09!11;CL:0000827!3.04e-09!11;CL:0000034!1.49e-08!97;CL:0000215!3.68e-07!3;CL:0000349!8.37e-07!3;CL:0000351!8.37e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.70e-17,6;CL:0000556,7.70e-17,6;CL:0002031,1.08e-15,25;CL:0000839,8.96e-14,13;CL:0000213,1.55e-12,1;CL:0002078,1.55e-12,1;CL:0000115,1.55e-12,1;CL:0002262,1.55e-12,1;CL:1000398,1.55e-12,1;CL:0000945,2.01e-12,1;CL:0000236,2.01e-12,1;CL:0000826,2.01e-12,1;CL:0000988,2.74e-12,32;CL:0002032,2.74e-12,32;CL:0000037,2.74e-12,32;CL:0000837,2.74e-12,32;CL:0002320,1.31e-11,46;CL:0000134,1.31e-11,46;CL:0000050,1.81e-11,9;CL:0000763,2.82e-11,16;CL:0000219,6.99e-10,54;CL:0000049,1.46e-09,19;CL:0002476,8.63e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.86e-09!46;UBERON:0000358!8.37e-07!3;UBERON:0000307!8.37e-07!3;UBERON:0000344!9.98e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.55e-12,1;UBERON:0001281,1.55e-12,1;UBERON:0000353,1.55e-12,1;UBERON:0003497,1.55e-12,1;UBERON:0003909,1.55e-12,1;UBERON:0003928,1.55e-12,1;UBERON:0003835,1.55e-12,1;UBERON:0003513,1.55e-12,1;UBERON:0001280,1.55e-12,1;UBERON:0004647,1.55e-12,1;UBERON:0002294,1.55e-12,1;UBERON:0001173,1.55e-12,1;UBERON:0004912,1.55e-12,1;UBERON:0005171,1.55e-12,1;UBERON:0002384,1.31e-11,46;UBERON:0002371,2.82e-11,16;UBERON:0002390,8.78e-09,45;UBERON:0003061,8.78e-09,45;UBERON:0001474,2.61e-08,22;UBERON:0004765,2.61e-08,22;UBERON:0001434,2.61e-08,22;UBERON:0002193,3.11e-08,48;UBERON:0002405,3.11e-08,48 | |||
|phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0.467225281191051,0.645616617207881,0.703943610758334,0,0.856089841127525,0.0797721589953364,1.02720437958723,0.262261207256992,0,0.404950534779652,0,1.41957974411207,1.23402990245165,1.27316895539409,0,0,0,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,2.02905142091174,0,0,0,0,0,0,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0.60492842261366,0.500895729946347,0,0.467225281191051,0.645616617207881,0.703943610758334,0,0.856089841127525,0.0797721589953364,1.02720437958723,0.262261207256992,0,0.404950534779652,0,1.41957974411207,1.23402990245165,1.27316895539409,0,0,0,0.639969691173627,0.68822784320151,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0,0.498703936075477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8456086666351,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.302904773332736,0.0755715601067855,2.02905142091174,0,0,0,0,0,0,0,0,0,0.14084341977668,0,5.09610479413291,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:41987641..41987645,+ | |||
}} | }} |
Latest revision as of 01:18, 5 August 2015
Short description: | p@chr12:41987641..41987645, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:41987641..41987645, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.70e-17 | 6 |
megakaryocyte | 7.70e-17 | 6 |
hematopoietic lineage restricted progenitor cell | 1.08e-15 | 25 |
myeloid lineage restricted progenitor cell | 8.96e-14 | 13 |
lining cell | 1.55e-12 | 1 |
meso-epithelial cell | 1.55e-12 | 1 |
endothelial cell | 1.55e-12 | 1 |
endothelial cell of sinusoid | 1.55e-12 | 1 |
endothelial cell of hepatic sinusoid | 1.55e-12 | 1 |
lymphocyte of B lineage | 2.01e-12 | 1 |
B cell | 2.01e-12 | 1 |
pro-B cell | 2.01e-12 | 1 |
hematopoietic cell | 2.74e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.74e-12 | 32 |
hematopoietic stem cell | 2.74e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.74e-12 | 32 |
connective tissue cell | 1.31e-11 | 46 |
mesenchymal cell | 1.31e-11 | 46 |
megakaryocyte-erythroid progenitor cell | 1.81e-11 | 9 |
myeloid cell | 2.82e-11 | 16 |
motile cell | 6.99e-10 | 54 |
common myeloid progenitor | 1.46e-09 | 19 |
bone marrow macrophage | 8.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.55e-12 | 1 |
hepatic sinusoid | 1.55e-12 | 1 |
parenchyma | 1.55e-12 | 1 |
abdomen blood vessel | 1.55e-12 | 1 |
sinusoid | 1.55e-12 | 1 |
digestive system duct | 1.55e-12 | 1 |
abdominal segment blood vessel | 1.55e-12 | 1 |
trunk blood vessel | 1.55e-12 | 1 |
liver parenchyma | 1.55e-12 | 1 |
liver lobule | 1.55e-12 | 1 |
biliary system | 1.55e-12 | 1 |
biliary tree | 1.55e-12 | 1 |
biliary bud | 1.55e-12 | 1 |
hepatic duct | 1.55e-12 | 1 |
connective tissue | 1.31e-11 | 46 |
bone marrow | 2.82e-11 | 16 |
hematopoietic system | 8.78e-09 | 45 |
blood island | 8.78e-09 | 45 |
bone element | 2.61e-08 | 22 |
skeletal element | 2.61e-08 | 22 |
skeletal system | 2.61e-08 | 22 |
hemolymphoid system | 3.11e-08 | 48 |
immune system | 3.11e-08 | 48 |