FFCP PHASE1:Mm9::chr1:170432843..170432852,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:170432843..170432852,+ | |||
|description=CAGE_peak_at_chr1:170432843..170432852,+ | |description=CAGE_peak_at_chr1:170432843..170432852,+ | ||
|id=chr1:170432843..170432852,+ | |id=chr1:170432843..170432852,+ | ||
|ontology_enrichment_celltype=CL:0000068!2.57e-20!3;CL:0002202!2.57e-20!3;CL:0000069!2.57e-20!3;CL:0002632!2.57e-20!3;CL:0002368!2.57e-20!3;CL:0000307!2.57e-20!3;CL:0000377!2.57e-20!3;CL:0000223!1.77e-11!20;CL:0002076!8.28e-11!15;CL:0000066!4.11e-09!25;CL:0000115!4.65e-08!1;CL:0000213!4.65e-08!1;CL:0002078!4.65e-08!1;CL:0002262!4.65e-08!1;CL:1000398!4.65e-08!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.69e-52,3;CL:0002202,3.69e-52,3;CL:0000069,3.69e-52,3;CL:0002632,3.69e-52,3;CL:0002368,3.69e-52,3;CL:0000307,3.69e-52,3;CL:0000377,3.69e-52,3;CL:0000223,2.48e-22,20;CL:0002076,4.06e-19,15;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000066,5.10e-18,25;CL:0000215,3.18e-07,3;CL:0002250,4.17e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!2.57e-20!3;UBERON:0001005!2.57e-20!3;UBERON:0007196!2.57e-20!3;UBERON:0001558!2.57e-20!3;UBERON:0002369!9.05e-09!7;UBERON:0006858!9.05e-09!7;UBERON:0000353!4.65e-08!1;UBERON:0003497!4.65e-08!1;UBERON:0003909!4.65e-08!1;UBERON:0003835!4.65e-08!1;UBERON:0003513!4.65e-08!1;UBERON:0001281!4.65e-08!1;UBERON:0001280!4.65e-08!1;UBERON:0004647!4.65e-08!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.69e-52,3;UBERON:0001005,3.69e-52,3;UBERON:0007196,3.69e-52,3;UBERON:0001558,3.69e-52,3;UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0005178,5.72e-10,17;UBERON:0005181,5.72e-10,17;UBERON:0002224,5.72e-10,17;UBERON:0000915,5.72e-10,17;UBERON:0008947,5.72e-10,17;UBERON:0003258,5.72e-10,17 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0,0,0.445326417194474,0,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42918549383658,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29894624606728,1.26679932737549,2.02209778005913,0,0,0.445326417194474,0,0,0,0.301445281105245,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:170432843..170432852,+ | |short_description=p@chr1:170432843..170432852,+ | ||
}} | }} |
Latest revision as of 05:04, 5 August 2015
Short description: | p@chr1:170432843..170432852, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:170432843..170432852, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.69e-52 | 3 |
epithelial cell of tracheobronchial tree | 3.69e-52 | 3 |
branched duct epithelial cell | 3.69e-52 | 3 |
epithelial cell of lower respiratory tract | 3.69e-52 | 3 |
respiratory epithelial cell | 3.69e-52 | 3 |
tracheal epithelial cell | 3.69e-52 | 3 |
tracheoblast | 3.69e-52 | 3 |
endodermal cell | 2.48e-22 | 20 |
endo-epithelial cell | 4.06e-19 | 15 |
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
epithelial cell | 5.10e-18 | 25 |
barrier cell | 3.18e-07 | 3 |
intestinal crypt stem cell | 4.17e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.69e-52 | 3 |
respiratory airway | 3.69e-52 | 3 |
tracheobronchial tree | 3.69e-52 | 3 |
lower respiratory tract | 3.69e-52 | 3 |
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
thoracic cavity element | 5.72e-10 | 17 |
thoracic segment organ | 5.72e-10 | 17 |
thoracic cavity | 5.72e-10 | 17 |
thoracic segment of trunk | 5.72e-10 | 17 |
respiratory primordium | 5.72e-10 | 17 |
endoderm of foregut | 5.72e-10 | 17 |