FFCP PHASE1:Mm9::chr9:45753130..45753140,-: Difference between revisions
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{{FFCP|EntrezGene=214597|HGNC=|MCL_coexpression_id=66|UniProt=|association_with_transcript=-14bp_to_ENSMUST00000160927_5end|description=CAGE_peak_16_at_Sidt2_5end|id=chr9:45753130..45753140,-|ontology_enrichment_celltype=CL:0000838!2.04e-14!12;CL:0000542!3.34e-13!13;CL:0000051!3.34e-13!13;CL:0000988!3.20e-12!32;CL:0002032!3.20e-12!32;CL:0000037!3.20e-12!32;CL:0000566!3.20e-12!32;CL:0000837!3.20e-12!32;CL:0000084!3.60e-12!11;CL:0000827!3.60e-12!11;CL:0002031!1.33e-11!25;CL:0000791!2.46e-11!9;CL:0000789!2.46e-11!9;CL:0002420!2.46e-11!9;CL:0002419!2.46e-11!9;CL:0000790!2.46e-11!9;CL:0000738!8.93e-10!17;CL:0002087!8.93e-10!17;CL:0000624!5.12e-09!8;CL:0002320!1.12e-07!46;CL:0000134!1.12e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,1.55e-14,9;CL:0000789,1.55e-14,9;CL:0002420,1.55e-14,9;CL:0002419,1.55e-14,9;CL:0000790,1.55e-14,9;CL:0000084,5.89e-12,11;CL:0000827,5.89e-12,11;CL:0000838,5.49e-11,12;CL:0000542,3.64e-10,13;CL:0000051,3.64e-10,13;CL:0000624,1.23e-09,8;CL:0000815,1.73e-09,1;CL:0000792,1.73e-09,1;CL:0000625,3.04e-09,1;CL:0000355,1.05e-08,9;CL:0000738,7.75e-08,17;CL:0002087,7.75e-08,17|ontology_enrichment_disease=DOID:0060100!6.21e-10!3;DOID:4045!6.21e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,7.81e-25,3;DOID:4045,7.81e-25,3;DOID:0050686,9.15e-13,6|ontology_enrichment_uberon=UBERON:0002370!3.36e-14!23;UBERON:0000974!3.36e-14!23;UBERON:0004807!3.36e-14!23;UBERON:0005058!3.36e-14!23;UBERON:0003351!3.36e-14!23;UBERON:0009113!3.36e-14!23;UBERON:0003295!3.36e-14!23;UBERON:0009722!3.36e-14!23;UBERON:0005562!3.36e-14!23;UBERON:0007690!3.36e-14!23;UBERON:0006562!1.65e-13!24;UBERON:0003408!1.65e-13!24;UBERON:0001557!1.65e-13!24;UBERON:0001042!1.65e-13!24;UBERON:0008814!1.65e-13!24;UBERON:0009145!1.65e-13!24;UBERON:0000072!9.61e-12!27;UBERON:0004177!9.03e-11!29;UBERON:0002390!4.78e-10!45;UBERON:0003061!4.78e-10!45;UBERON:0002193!3.16e-09!48;UBERON:0000063!1.59e-08!35;UBERON:0002384!1.12e-07!46;UBERON:0000065!6.08e-07!41|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.05e-08,9;UBERON:0002036,1.05e-08,9;UBERON:0002385,1.05e-08,9;UBERON:0000486,1.05e-08,9;UBERON:0007503,1.05e-08,9;UBERON:0001015,1.05e-08,9;UBERON:0002329,1.05e-08,9;UBERON:0003082,1.05e-08,9;UBERON:0003059,1.05e-08,9;UBERON:0007282,1.05e-08,9;UBERON:0004290,1.05e-08,9;UBERON:0009618,1.05e-08,9;UBERON:0000383,6.86e-08,10;UBERON:0007524,3.21e-07,11;UBERON:0003077,3.21e-07,11;UBERON:0007285,3.21e-07,11|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.281577444303333,0,0,0,0.513602189793617,1.92324885321794,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,1.57057123192139,3.52938892818609,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0.671130424230945,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,1.95932033253121,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.15241361331,0.201652370273681,0.38983152295901,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p16@Sidt2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214597 | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENSMUST00000160927_5end | |||
|cluster_id=chr9:45753130..45753140,- | |||
|description=CAGE_peak_16_at_Sidt2_5end | |||
|id=chr9:45753130..45753140,- | |||
|ontology_enrichment_celltype=CL:0000838!2.04e-14!12;CL:0000542!3.34e-13!13;CL:0000051!3.34e-13!13;CL:0000988!3.20e-12!32;CL:0002032!3.20e-12!32;CL:0000037!3.20e-12!32;CL:0000566!3.20e-12!32;CL:0000837!3.20e-12!32;CL:0000084!3.60e-12!11;CL:0000827!3.60e-12!11;CL:0002031!1.33e-11!25;CL:0000791!2.46e-11!9;CL:0000789!2.46e-11!9;CL:0002420!2.46e-11!9;CL:0002419!2.46e-11!9;CL:0000790!2.46e-11!9;CL:0000738!8.93e-10!17;CL:0002087!8.93e-10!17;CL:0000624!5.12e-09!8;CL:0002320!1.12e-07!46;CL:0000134!1.12e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.55e-14,9;CL:0000789,1.55e-14,9;CL:0002420,1.55e-14,9;CL:0002419,1.55e-14,9;CL:0000790,1.55e-14,9;CL:0000084,5.89e-12,11;CL:0000827,5.89e-12,11;CL:0000838,5.49e-11,12;CL:0000542,3.64e-10,13;CL:0000051,3.64e-10,13;CL:0000624,1.23e-09,8;CL:0000815,1.73e-09,1;CL:0000792,1.73e-09,1;CL:0000625,3.04e-09,1;CL:0000355,1.05e-08,9;CL:0000738,7.75e-08,17;CL:0002087,7.75e-08,17 | |||
|ontology_enrichment_disease=DOID:0060100!6.21e-10!3;DOID:4045!6.21e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.81e-25,3;DOID:4045,7.81e-25,3;DOID:0050686,9.15e-13,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!3.36e-14!23;UBERON:0000974!3.36e-14!23;UBERON:0004807!3.36e-14!23;UBERON:0005058!3.36e-14!23;UBERON:0003351!3.36e-14!23;UBERON:0009113!3.36e-14!23;UBERON:0003295!3.36e-14!23;UBERON:0009722!3.36e-14!23;UBERON:0005562!3.36e-14!23;UBERON:0007690!3.36e-14!23;UBERON:0006562!1.65e-13!24;UBERON:0003408!1.65e-13!24;UBERON:0001557!1.65e-13!24;UBERON:0001042!1.65e-13!24;UBERON:0008814!1.65e-13!24;UBERON:0009145!1.65e-13!24;UBERON:0000072!9.61e-12!27;UBERON:0004177!9.03e-11!29;UBERON:0002390!4.78e-10!45;UBERON:0003061!4.78e-10!45;UBERON:0002193!3.16e-09!48;UBERON:0000063!1.59e-08!35;UBERON:0002384!1.12e-07!46;UBERON:0000065!6.08e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.05e-08,9;UBERON:0002036,1.05e-08,9;UBERON:0002385,1.05e-08,9;UBERON:0000486,1.05e-08,9;UBERON:0007503,1.05e-08,9;UBERON:0001015,1.05e-08,9;UBERON:0002329,1.05e-08,9;UBERON:0003082,1.05e-08,9;UBERON:0003059,1.05e-08,9;UBERON:0007282,1.05e-08,9;UBERON:0004290,1.05e-08,9;UBERON:0009618,1.05e-08,9;UBERON:0000383,6.86e-08,10;UBERON:0007524,3.21e-07,11;UBERON:0003077,3.21e-07,11;UBERON:0007285,3.21e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,0.281577444303333,0,0,0,0.513602189793617,1.92324885321794,0,0.202475267389826,0,0.473193248037357,0.137114433605739,0,0,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.1253413780952,1.57057123192139,3.52938892818609,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0.671130424230945,2.17608642603403,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,1.95932033253121,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.15241361331,0.201652370273681,0.38983152295901,0,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p16@Sidt2 | |||
}} |
Revision as of 05:08, 5 August 2015
Short description: | p16@Sidt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_Sidt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | -14bp_to_ENSMUST00000160927_5end |
EntrezGene: | 214597 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.55e-14 | 9 |
alpha-beta T cell | 1.55e-14 | 9 |
immature T cell | 1.55e-14 | 9 |
mature T cell | 1.55e-14 | 9 |
immature alpha-beta T cell | 1.55e-14 | 9 |
T cell | 5.89e-12 | 11 |
pro-T cell | 5.89e-12 | 11 |
lymphoid lineage restricted progenitor cell | 5.49e-11 | 12 |
lymphocyte | 3.64e-10 | 13 |
common lymphoid progenitor | 3.64e-10 | 13 |
CD4-positive, alpha-beta T cell | 1.23e-09 | 8 |
regulatory T cell | 1.73e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.73e-09 | 1 |
CD8-positive, alpha-beta T cell | 3.04e-09 | 1 |
multi-potent skeletal muscle stem cell | 1.05e-08 | 9 |
leukocyte | 7.75e-08 | 17 |
nongranular leukocyte | 7.75e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.05e-08 | 9 |
striated muscle tissue | 1.05e-08 | 9 |
muscle tissue | 1.05e-08 | 9 |
multilaminar epithelium | 1.05e-08 | 9 |
epithelial vesicle | 1.05e-08 | 9 |
musculature | 1.05e-08 | 9 |
somite | 1.05e-08 | 9 |
myotome | 1.05e-08 | 9 |
presomitic mesoderm | 1.05e-08 | 9 |
presumptive segmental plate | 1.05e-08 | 9 |
dermomyotome | 1.05e-08 | 9 |
trunk paraxial mesoderm | 1.05e-08 | 9 |
musculature of body | 6.86e-08 | 10 |
dense mesenchyme tissue | 3.21e-07 | 11 |
paraxial mesoderm | 3.21e-07 | 11 |
presumptive paraxial mesoderm | 3.21e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.81e-25 | 3 |
muscle cancer | 7.81e-25 | 3 |
organ system cancer | 9.15e-13 | 6 |