FFCP PHASE1:Mm9::chr12:74866678..74866679,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:74866678..74866679,+ to FFCP PHASE1:Mm9::chr12:74866678..74866679,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1103 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:74866678..74866679,+ | |||
|description=CAGE_peak_at_chr12:74866678..74866679,+ | |||
|id=chr12:74866678..74866679,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.38e-08!11;CL:0000827!2.38e-08!11;CL:0000838!1.63e-07!12;CL:0000791!2.02e-07!9;CL:0000789!2.02e-07!9;CL:0002420!2.02e-07!9;CL:0002419!2.02e-07!9;CL:0000790!2.02e-07!9;CL:0000542!4.01e-07!13;CL:0000051!4.01e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.74e-09,11;CL:0000827,3.74e-09,11;CL:0000791,4.09e-08,9;CL:0000789,4.09e-08,9;CL:0002420,4.09e-08,9;CL:0002419,4.09e-08,9;CL:0000790,4.09e-08,9;CL:0000838,6.85e-08,12;CL:0000542,1.78e-07,13;CL:0000051,1.78e-07,13;CL:0000624,2.55e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.74e-12!42;UBERON:0000065!7.40e-12!41;UBERON:0000077!1.94e-09!97;UBERON:0000926!3.32e-09!193;UBERON:0004120!3.32e-09!193;UBERON:0006603!3.32e-09!193;UBERON:0000072!9.01e-09!27;UBERON:0006562!1.14e-08!24;UBERON:0001557!1.14e-08!24;UBERON:0001042!1.14e-08!24;UBERON:0008814!1.14e-08!24;UBERON:0009145!1.14e-08!24;UBERON:0003408!1.18e-08!24;UBERON:0004177!1.35e-08!29;UBERON:0001041!3.02e-08!92;UBERON:0002370!3.08e-08!23;UBERON:0000974!3.08e-08!23;UBERON:0004807!3.08e-08!23;UBERON:0005058!3.08e-08!23;UBERON:0003351!3.08e-08!23;UBERON:0009113!3.08e-08!23;UBERON:0003295!3.08e-08!23;UBERON:0009722!3.08e-08!23;UBERON:0005562!3.08e-08!23;UBERON:0007690!3.08e-08!23;UBERON:0003104!2.03e-07!131;UBERON:0009142!2.03e-07!131;UBERON:0003081!2.20e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,5.24e-14,42;UBERON:0000065,1.61e-13,41;UBERON:0000077,1.09e-11,35;UBERON:0000072,2.52e-10,27;UBERON:0006562,3.02e-10,24;UBERON:0001557,3.02e-10,24;UBERON:0001042,3.02e-10,24;UBERON:0008814,3.02e-10,24;UBERON:0009145,3.02e-10,24;UBERON:0003408,3.13e-10,24;UBERON:0004177,4.24e-10,29;UBERON:0005057,4.24e-10,29;UBERON:0001041,4.80e-10,80;UBERON:0002370,9.29e-10,23;UBERON:0000974,9.29e-10,23;UBERON:0004807,9.29e-10,23;UBERON:0005058,9.29e-10,23;UBERON:0003351,9.29e-10,23;UBERON:0009113,9.29e-10,23;UBERON:0003295,9.29e-10,23;UBERON:0009722,9.29e-10,23;UBERON:0005562,9.29e-10,23;UBERON:0007690,9.29e-10,23;UBERON:0007811,2.75e-08,36;UBERON:0003081,2.43e-07,87 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,13.0414556675992,25.3419699873,16.8526458951835,13.0125655851384,5.98291192465023,11.1280474455284,8.91688104673774,0,0.607425802169478,0,1.10411757875383,0.959801035240171,1.69755860719212,2.21112554392781,4.76596565764249,6.00759515019551,0.319984845586813,0,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,18.1340535502836,31.5928171193916,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0,8.69593466105033,1.72084775396277,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,1.94112595522402,6.73238497482646,1.7813056687779,0.346970653532272,1.52232739156071,1.15307748628029,0.904335843315735,2.23418543557839,0.753999547978053,1.73036477414062,2.89198713839823,0.884610551949874,1.7794353494215,3.97514733228708,2.42437626567611,0,0,0.209446706813455,1.53274233125155,2.03685711660064,0,1.39777249780371,0.149790639404823,4.11750542536764,0.251308704225729,0.173824320192276,0,1.0389402227978,1.46017136760982,0.509196819251581,1.11966273549084,2.0217820674694,1.47309299120532,0.520481771850815,0.459804208866946,0,1.9591626318643,2.99360596265843,3.20284300712124,2.34254311399322,1.81092359517311,0.431135985865684,0.756424320671277,0.703804496655795,0.43839146485515,3.61461423993277,0.348252166522167,3.70407845534298,0.59710280045548,2.1066395619397,0.257347907114715,1.13665399758237,2.27838349789052,3.04883877975425,0.720248245844059,0.473489471170421,1.37734962223183,2.1597395804233,3.95307706075693,2.95100741539581,4.90414437942112,2.30383789878873,7.55170334763838,4.9451973822972,4.5321996101853,6.36695334344047,3.48936688776967,0.630869845692382,0.308713837137853,2.97376904685418,0,1.06644125267617,0.696710015581316,0.515469845288373,1.21010114774006,2.2237804384487,0.380451252225118,1.42358718463353,1.4822905925161,1.75934646160189,0.596869416123452,0.58489226135736,0.898819408654221,1.94524244887225,0.995706366271836,0,1.94222471436539,2.25415471346161,2.8511185898344,1.16371492300575,2.31448205638051,2.97211724484009,2.21415221969403,4.86696056308262,2.09775178667061,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,1.45921704097532,1.64736847912849,4.31304619582064,1.11642284300551,1.87222603868736,1.76805214562978,1.4351793081753,0,5.35784251483154,0.189491411770485,0.325929952884052,1.18821560042632,2.58159273117352,1.34005005953453,1.19021820443007,7.80534591431195,6.30540576424764,6.42247599981447,8.13219320153184,11.9620219742489,10.1884139300878,9.83613598354279,1.50791283939272,4.89515115436839,1.96705709207614,3.58717770196152,0.160550589987792,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0.99358059645788,0.35613120733451,1.14020871547503,2.14461159864296,0,0.485561272309963,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,3.10113951801865,1.45413491791002,0.712994756769443,2.84433082142234,1.05418608574999,0,5.10659408630682,1.08036656418786,0.388076051348264,2.14337035031592,1.41872186913819,2.85390108163313,3.29098041204242,1.522324745573,3.98941903708308,4.02480934641258,0.882113592219848,10.2229476823718,8.55761461488299,4.34253059482722,5.01363844813173,6.72977688954751,1.45740418314925,0.741701208042039,1.19609616558497,1.03193433981611,1.29636169158798,2.44878994106098,3.14396723758358,3.66045077130436,7.13909405974192,4.89830083132803,4.42239916174156,3.81868247206045,0.158167996790568,0.813277868507395,1.72808545314882,3.3454127362315,3.27543845619266,3.77620169877498,2.39695021603474,1.04702376793612,1.94422459937689,4.34937519160848,0,0.299033092087958,0,0.388902376688095,0.129159823477731,0.506868376472335,1.05621514781179,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,4.74016680942267,1.82452693761148,2.87590680061516,4.02754551231165,3.58053391334963,2.38417625737518,10.2166132091974,10.0428878478713,7.67345019605922,7.77309427880998,10.4859232542314,9.06358290879698,9.62118416403295,12.5058285334279,4.53460767230423,0.221985953374065,0.448569283047378,0,3.28422309854724,4.31669693537719,2.38097111547445,4.71610433973945,5.01572104035363,0,0,0.572895513439397,1.03111909406213,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,1.45864030240976,0.838452650511929,0.551530525350042,0.666740183404846,1.85431551515005,0.962757628775446,1.26348605881899,2.28131369901216,1.50901073108861,1.68554713445788,1.02440243847791,1.03383844120104,3.33405583898152,1.27472758539341,0.77163688185482,3.70877310722976,2.20798380201596,2.40008476669791,1.4198064492747,1.90748951957857,1.59881058295561,1.59985946706062,2.62305284464197,1.28049581010941,2.10455769150274,1.62964936615034,3.92799590160417,2.13543032623513,1.77308068276014,1.6369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| |phase1_expression=0.320297694209588,0,0,0,0,0,0,13.0414556675992,25.3419699873,16.8526458951835,13.0125655851384,5.98291192465023,11.1280474455284,8.91688104673774,0,0.607425802169478,0,1.10411757875383,0.959801035240171,1.69755860719212,2.21112554392781,4.76596565764249,6.00759515019551,0.319984845586813,0,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0.7813353445238,0,0.588231488031014,0.683045484958446,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,18.1340535502836,31.5928171193916,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0,0,0.52091337055676,0,0,0,0.589257170947335,0.142371680799103,0.186399445825301,0,0,8.69593466105033,1.72084775396277,0,0,0,0.896053774194671,0.421333260395256,0,0,0,0,0,0,0,1.73192832808971,1.26679932737549,2.52762222507392,1.94112595522402,6.73238497482646,1.7813056687779,0.346970653532272,1.52232739156071,1.15307748628029,0.904335843315735,2.23418543557839,0.753999547978053,1.73036477414062,2.89198713839823,0.884610551949874,1.7794353494215,3.97514733228708,2.42437626567611,0,0,0.209446706813455,1.53274233125155,2.03685711660064,0,1.39777249780371,0.149790639404823,4.11750542536764,0.251308704225729,0.173824320192276,0,1.0389402227978,1.46017136760982,0.509196819251581,1.11966273549084,2.0217820674694,1.47309299120532,0.520481771850815,0.459804208866946,0,1.9591626318643,2.99360596265843,3.20284300712124,2.34254311399322,1.81092359517311,0.431135985865684,0.756424320671277,0.703804496655795,0.43839146485515,3.61461423993277,0.348252166522167,3.70407845534298,0.59710280045548,2.1066395619397,0.257347907114715,1.13665399758237,2.27838349789052,3.04883877975425,0.720248245844059,0.473489471170421,1.37734962223183,2.1597395804233,3.95307706075693,2.95100741539581,4.90414437942112,2.30383789878873,7.55170334763838,4.9451973822972,4.5321996101853,6.36695334344047,3.48936688776967,0.630869845692382,0.308713837137853,2.97376904685418,0,1.06644125267617,0.696710015581316,0.515469845288373,1.21010114774006,2.2237804384487,0.380451252225118,1.42358718463353,1.4822905925161,1.75934646160189,0.596869416123452,0.58489226135736,0.898819408654221,1.94524244887225,0.995706366271836,0,1.94222471436539,2.25415471346161,2.8511185898344,1.16371492300575,2.31448205638051,2.97211724484009,2.21415221969403,4.86696056308262,2.09775178667061,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0.482354319504834,0.763877555344259,0.575392274901621,1.45921704097532,1.64736847912849,4.31304619582064,1.11642284300551,1.87222603868736,1.76805214562978,1.4351793081753,0,5.35784251483154,0.189491411770485,0.325929952884052,1.18821560042632,2.58159273117352,1.34005005953453,1.19021820443007,7.80534591431195,6.30540576424764,6.42247599981447,8.13219320153184,11.9620219742489,10.1884139300878,9.83613598354279,1.50791283939272,4.89515115436839,1.96705709207614,3.58717770196152,0.160550589987792,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0.321321316421807,0.99358059645788,0.35613120733451,1.14020871547503,2.14461159864296,0,0.485561272309963,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,3.10113951801865,1.45413491791002,0.712994756769443,2.84433082142234,1.05418608574999,0,5.10659408630682,1.08036656418786,0.388076051348264,2.14337035031592,1.41872186913819,2.85390108163313,3.29098041204242,1.522324745573,3.98941903708308,4.02480934641258,0.882113592219848,10.2229476823718,8.55761461488299,4.34253059482722,5.01363844813173,6.72977688954751,1.45740418314925,0.741701208042039,1.19609616558497,1.03193433981611,1.29636169158798,2.44878994106098,3.14396723758358,3.66045077130436,7.13909405974192,4.89830083132803,4.42239916174156,3.81868247206045,0.158167996790568,0.813277868507395,1.72808545314882,3.3454127362315,3.27543845619266,3.77620169877498,2.39695021603474,1.04702376793612,1.94422459937689,4.34937519160848,0,0.299033092087958,0,0.388902376688095,0.129159823477731,0.506868376472335,1.05621514781179,0.39061315453185,0.629156066554265,0.241584120826006,0.576060012515731,4.74016680942267,1.82452693761148,2.87590680061516,4.02754551231165,3.58053391334963,2.38417625737518,10.2166132091974,10.0428878478713,7.67345019605922,7.77309427880998,10.4859232542314,9.06358290879698,9.62118416403295,12.5058285334279,4.53460767230423,0.221985953374065,0.448569283047378,0,3.28422309854724,4.31669693537719,2.38097111547445,4.71610433973945,5.01572104035363,0,0,0.572895513439397,1.03111909406213,0,0,0,0,0,0,0.103787347584177,0,0.682934423016537,1.45864030240976,0.838452650511929,0.551530525350042,0.666740183404846,1.85431551515005,0.962757628775446,1.26348605881899,2.28131369901216,1.50901073108861,1.68554713445788,1.02440243847791,1.03383844120104,3.33405583898152,1.27472758539341,0.77163688185482,3.70877310722976,2.20798380201596,2.40008476669791,1.4198064492747,1.90748951957857,1.59881058295561,1.59985946706062,2.62305284464197,1.28049581010941,2.10455769150274,1.62964936615034,3.92799590160417,2.13543032623513,1.77308068276014,1.63692417267876,1.54936841185966,1.15743966588685,0.249810577937946,1.87145286756327,1.50409737833809,2.48674831689496,1.76473135295612,1.62307484934295 | ||
|short_description=p@chr12:74866678..74866679,+ | |||
}} | }} |
Latest revision as of 05:37, 5 August 2015
Short description: | p@chr12:74866678..74866679, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74866678..74866679, + |
Coexpression cluster: | MCL_coexpression_mm9:1103 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 3.74e-09 | 11 |
pro-T cell | 3.74e-09 | 11 |
mature alpha-beta T cell | 4.09e-08 | 9 |
alpha-beta T cell | 4.09e-08 | 9 |
immature T cell | 4.09e-08 | 9 |
mature T cell | 4.09e-08 | 9 |
immature alpha-beta T cell | 4.09e-08 | 9 |
lymphoid lineage restricted progenitor cell | 6.85e-08 | 12 |
lymphocyte | 1.78e-07 | 13 |
common lymphoid progenitor | 1.78e-07 | 13 |
CD4-positive, alpha-beta T cell | 2.55e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 5.24e-14 | 42 |
respiratory tract | 1.61e-13 | 41 |
mixed endoderm/mesoderm-derived structure | 1.09e-11 | 35 |
segment of respiratory tract | 2.52e-10 | 27 |
pharynx | 3.02e-10 | 24 |
upper respiratory tract | 3.02e-10 | 24 |
chordate pharynx | 3.02e-10 | 24 |
pharyngeal arch system | 3.02e-10 | 24 |
pharyngeal region of foregut | 3.02e-10 | 24 |
gland of gut | 3.13e-10 | 24 |
hemopoietic organ | 4.24e-10 | 29 |
immune organ | 4.24e-10 | 29 |
foregut | 4.80e-10 | 80 |
thymus | 9.29e-10 | 23 |
neck | 9.29e-10 | 23 |
respiratory system epithelium | 9.29e-10 | 23 |
hemolymphoid system gland | 9.29e-10 | 23 |
pharyngeal epithelium | 9.29e-10 | 23 |
thymic region | 9.29e-10 | 23 |
pharyngeal gland | 9.29e-10 | 23 |
entire pharyngeal arch endoderm | 9.29e-10 | 23 |
thymus primordium | 9.29e-10 | 23 |
early pharyngeal endoderm | 9.29e-10 | 23 |
craniocervical region | 2.75e-08 | 36 |
lateral plate mesoderm | 2.43e-07 | 87 |