FFCP PHASE1:Mm9::chr1:179377578..179377589,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2976|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:179377578..179377589,+|id=chr1:179377578..179377589,+|ontology_enrichment_celltype=CL:0002609!1.58e-07!6|ontology_enrichment_celltype_v019_2=CL:0002609,2.61e-09,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!3.18e-18!21;UBERON:0001869!3.18e-18!21;UBERON:0000203!3.18e-18!21;UBERON:0002791!1.44e-16!29;UBERON:0003528!1.44e-16!29;UBERON:0001893!1.44e-16!29;UBERON:0002616!2.28e-13!49;UBERON:0002020!2.64e-13!34;UBERON:0000955!5.80e-13!50;UBERON:0006238!5.80e-13!50;UBERON:0002619!1.66e-12!17;UBERON:0002780!4.11e-12!39;UBERON:0001890!4.11e-12!39;UBERON:0006240!4.11e-12!39;UBERON:0003080!1.15e-11!40;UBERON:0000033!8.50e-11!63;UBERON:0001017!2.49e-10!73;UBERON:0005743!2.49e-10!73;UBERON:0001049!5.42e-10!52;UBERON:0005068!5.42e-10!52;UBERON:0006241!5.42e-10!52;UBERON:0007135!5.42e-10!52;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0003056!1.77e-09!49;UBERON:0001954!1.77e-08!7;UBERON:0003022!1.77e-08!7;UBERON:0002421!1.77e-08!7;UBERON:0000349!1.77e-08!7;UBERON:0002600!1.77e-08!7;UBERON:0002346!5.31e-08!71;UBERON:0003075!5.31e-08!71;UBERON:0007284!5.31e-08!71|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.27e-21,21;UBERON:0001869,1.27e-21,21;UBERON:0000203,1.27e-21,21;UBERON:0003528,9.49e-16,29;UBERON:0002791,9.49e-16,29;UBERON:0001893,9.49e-16,29;UBERON:0002616,1.70e-13,46;UBERON:0002020,1.79e-13,34;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0002619,2.83e-12,17;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0000073,1.59e-11,54;UBERON:0003080,1.74e-11,40;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.07e-09,49;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0001954,3.21e-08,7;UBERON:0003022,3.21e-08,7;UBERON:0002421,3.21e-08,7;UBERON:0000349,3.21e-08,7;UBERON:0002600,3.21e-08,7;UBERON:0010314,8.41e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,2.52389953621658,0,0,0.857435594504678,0.383381884072945,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,1.46612694769419,0,0,0,0,0,0,0.251308704225729,0.521472960576829,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.2929475961371,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0,2.2661816921691,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0,0,0.376437521661322,0,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0|short_description=p@chr1:179377578..179377589,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2976 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:179377578..179377589,+ | |||
|description=CAGE_peak_at_chr1:179377578..179377589,+ | |||
|id=chr1:179377578..179377589,+ | |||
|ontology_enrichment_celltype=CL:0002609!1.58e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,2.61e-09,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!3.18e-18!21;UBERON:0001869!3.18e-18!21;UBERON:0000203!3.18e-18!21;UBERON:0002791!1.44e-16!29;UBERON:0003528!1.44e-16!29;UBERON:0001893!1.44e-16!29;UBERON:0002616!2.28e-13!49;UBERON:0002020!2.64e-13!34;UBERON:0000955!5.80e-13!50;UBERON:0006238!5.80e-13!50;UBERON:0002619!1.66e-12!17;UBERON:0002780!4.11e-12!39;UBERON:0001890!4.11e-12!39;UBERON:0006240!4.11e-12!39;UBERON:0003080!1.15e-11!40;UBERON:0000033!8.50e-11!63;UBERON:0001017!2.49e-10!73;UBERON:0005743!2.49e-10!73;UBERON:0001049!5.42e-10!52;UBERON:0005068!5.42e-10!52;UBERON:0006241!5.42e-10!52;UBERON:0007135!5.42e-10!52;UBERON:0000073!7.49e-10!75;UBERON:0001016!7.49e-10!75;UBERON:0003056!1.77e-09!49;UBERON:0001954!1.77e-08!7;UBERON:0003022!1.77e-08!7;UBERON:0002421!1.77e-08!7;UBERON:0000349!1.77e-08!7;UBERON:0002600!1.77e-08!7;UBERON:0002346!5.31e-08!71;UBERON:0003075!5.31e-08!71;UBERON:0007284!5.31e-08!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,1.27e-21,21;UBERON:0001869,1.27e-21,21;UBERON:0000203,1.27e-21,21;UBERON:0003528,9.49e-16,29;UBERON:0002791,9.49e-16,29;UBERON:0001893,9.49e-16,29;UBERON:0002616,1.70e-13,46;UBERON:0002020,1.79e-13,34;UBERON:0000955,3.25e-13,47;UBERON:0006238,3.25e-13,47;UBERON:0002619,2.83e-12,17;UBERON:0001049,5.81e-12,52;UBERON:0005068,5.81e-12,52;UBERON:0006241,5.81e-12,52;UBERON:0007135,5.81e-12,52;UBERON:0002780,8.93e-12,39;UBERON:0001890,8.93e-12,39;UBERON:0006240,8.93e-12,39;UBERON:0000073,1.59e-11,54;UBERON:0003080,1.74e-11,40;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0003056,2.07e-09,49;UBERON:0010371,1.47e-08,73;UBERON:0001017,1.47e-08,73;UBERON:0001016,2.47e-08,75;UBERON:0001954,3.21e-08,7;UBERON:0003022,3.21e-08,7;UBERON:0002421,3.21e-08,7;UBERON:0000349,3.21e-08,7;UBERON:0002600,3.21e-08,7;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.388859798148567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725827286159344,1.08004750665353,2.52389953621658,0,0,0.857435594504678,0.383381884072945,0,0,0.127687338085188,0.307213066512487,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0.585561594023094,1.46612694769419,0,0,0,0,0,0,0.251308704225729,0.521472960576829,0.767146371990992,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68231958851302,3.2929475961371,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0.224862112384854,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0,0,0,0.584511715822624,0,0,0,0.178065603667255,0,0,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0.572895513439397,1.03111909406213,0,2.2661816921691,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0,0,0.177475806159338,0,0,0.376437521661322,0,0.365855945745545,0.263069711437843,0,0,0.237270036248348,0,0,0,0.192906610981141,0.499621155875892,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:179377578..179377589,+ | |||
}} |
Latest revision as of 09:08, 5 August 2015
Short description: | p@chr1:179377578..179377589, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:179377578..179377589, + |
Coexpression cluster: | MCL_coexpression_mm9:2976 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 2.61e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 1.27e-21 | 21 |
cerebral hemisphere | 1.27e-21 | 21 |
pallium | 1.27e-21 | 21 |
brain grey matter | 9.49e-16 | 29 |
regional part of telencephalon | 9.49e-16 | 29 |
telencephalon | 9.49e-16 | 29 |
regional part of brain | 1.70e-13 | 46 |
gray matter | 1.79e-13 | 34 |
brain | 3.25e-13 | 47 |
future brain | 3.25e-13 | 47 |
regional part of cerebral cortex | 2.83e-12 | 17 |
neural tube | 5.81e-12 | 52 |
neural rod | 5.81e-12 | 52 |
future spinal cord | 5.81e-12 | 52 |
neural keel | 5.81e-12 | 52 |
regional part of forebrain | 8.93e-12 | 39 |
forebrain | 8.93e-12 | 39 |
future forebrain | 8.93e-12 | 39 |
regional part of nervous system | 1.59e-11 | 54 |
anterior neural tube | 1.74e-11 | 40 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
pre-chordal neural plate | 2.07e-09 | 49 |
ecto-epithelium | 1.47e-08 | 73 |
central nervous system | 1.47e-08 | 73 |
nervous system | 2.47e-08 | 75 |
Ammon's horn | 3.21e-08 | 7 |
lobe parts of cerebral cortex | 3.21e-08 | 7 |
hippocampal formation | 3.21e-08 | 7 |
limbic system | 3.21e-08 | 7 |
limbic lobe | 3.21e-08 | 7 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |