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FFCP PHASE1:Mm9::chr7:77509967..77509988,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=2472
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-56bp_to_uc009hnk.1,uc009hnl.1_5end
|association_with_transcript=-56bp_to_uc009hnk.1,uc009hnl.1_5end
|cluster_id=chr7:77509967..77509988,+
|description=CAGE_peak_3_at_uc009hnk.1_5end,CAGE_peak_3_at_uc009hnl.1_5end
|description=CAGE_peak_3_at_uc009hnk.1_5end,CAGE_peak_3_at_uc009hnl.1_5end
|id=chr7:77509967..77509988,+
|id=chr7:77509967..77509988,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.14e-09!66;UBERON:0000464!1.20e-09!57;UBERON:0005177!2.25e-09!85;UBERON:0002048!1.38e-08!14;UBERON:0000117!1.38e-08!14;UBERON:0000171!1.38e-08!14;UBERON:0000170!1.38e-08!14;UBERON:0005597!1.38e-08!14;UBERON:0000118!1.38e-08!14;UBERON:0000466!1.79e-08!79;UBERON:0000468!5.63e-08!333;UBERON:0000991!1.47e-07!18;UBERON:0005564!1.47e-07!18;UBERON:0005156!2.20e-07!26;UBERON:0000990!2.20e-07!26;UBERON:0005157!2.41e-07!27;UBERON:0003133!2.97e-07!24;UBERON:0002100!3.23e-07!98;UBERON:0001008!4.26e-07!17;UBERON:0002113!6.20e-07!14;UBERON:0003918!6.20e-07!14;UBERON:0005095!6.20e-07!14;UBERON:0007687!6.20e-07!14;UBERON:0004176!6.42e-07!17;UBERON:0009196!6.42e-07!17;UBERON:0009117!6.42e-07!17;UBERON:0006554!7.85e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0002048,2.48e-11,14;UBERON:0000117,2.48e-11,14;UBERON:0000171,2.48e-11,14;UBERON:0000170,2.48e-11,14;UBERON:0005597,2.48e-11,14;UBERON:0000118,2.48e-11,14;UBERON:0009569,3.62e-10,66;UBERON:0005177,5.18e-10,79;UBERON:0000991,1.71e-09,18;UBERON:0005564,1.71e-09,18;UBERON:0005157,2.53e-09,20;UBERON:0005156,7.59e-09,26;UBERON:0000990,7.59e-09,26;UBERON:0003133,1.08e-08,24;UBERON:0004176,1.28e-08,17;UBERON:0009196,1.28e-08,17;UBERON:0009117,1.28e-08,17;UBERON:0005153,2.05e-08,17;UBERON:0005178,2.05e-08,17;UBERON:0005181,2.05e-08,17;UBERON:0002224,2.05e-08,17;UBERON:0000915,2.05e-08,17;UBERON:0008947,2.05e-08,17;UBERON:0003258,2.05e-08,17;UBERON:0002113,2.28e-08,14;UBERON:0003918,2.28e-08,14;UBERON:0011143,2.28e-08,14;UBERON:0005095,2.28e-08,14;UBERON:0007687,2.28e-08,14;UBERON:0002100,1.23e-07,90;UBERON:0002323,1.29e-07,37;UBERON:0004458,1.29e-07,37;UBERON:0003886,3.24e-07,38;UBERON:0001008,3.68e-07,19;UBERON:0002553,7.72e-07,39;UBERON:0006554,8.60e-07,18
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.734187008646726,2.34717403304412,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0.285650984403804,0.662605622854841,0.367472397644862,0,0,0,0.766124028511126,0.921639199537461,0.527545150920775,0.365950574409639,2.08365348222704,0.558365998002762,0,1.5279824777681,1.76777151284201,0.427115042397309,0.372798891650601,0.605809546665472,0.377857800533928,4.63783181922684,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,0.519572009205738,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.68510327831436,1.29468941823586,1.92974780784272,2.4287945747259,0,0.691846491768175,1.20578112442098,2.23418543557839,0.628332956648377,0,1.15679485535929,0,0.970601099684455,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.869121600961382,0.767146371990992,1.0389402227978,1.29793010454206,3.97173519016234,0.622034853050465,0.252722758433675,0.210441855886474,0.390361328888111,0,0.900310649026746,1.05493372485001,0.408218994907967,1.0249097622788,0.374806898238915,0.517406741478031,0.646703978798527,1.51284864134255,1.05570674498369,0.657587197282725,0.834141747676794,0,0.61734640922383,6.36909653819178,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.18372367792605,0.590292695242212,0.462801338662135,0.930135779001631,0.268273401399619,0.934122738937356,0.329119699826961,1.14917224855367,0.810688095458557,1.31579988682799,0.219550115291051,0.805238512562231,1.68231958851302,0.823236899034275,0,0,2.13288250535234,1.62565670302307,1.28867461322093,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,2.65535061334314,4.22719496655997,6.76246414038483,3.25842124552503,2.32742984601151,6.52263124979963,5.69128834118316,1.77132177575523,3.1399745568275,1.97435462274881,0.889357881261447,0.667380422864376,1.17935397067922,0,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0,0.505157755894224,0,1.4473305640901,1.66277871149944,1.51593129416388,2.44447464663039,2.20668611507745,3.75504397261603,9.21284415929987,3.80869825417622,2.53673742215138,4.09851374676097,3.10050565508285,3.34855014180723,2.29408640602033,2.93564469172023,2.4590339958857,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0.655739781506702,0.757412781613119,1.26203287766503,1.17131623288992,1.72338718186239,0.238968797952552,1.55959071857676,0.849229592366497,0.809621403349789,0.876767573733936,1.18586333383957,0.642642632843614,4.11626247103979,1.78065603667255,4.0721739838394,4.28922319728592,0,0.971122544619926,2.11626489875326,0,0.590603785761546,0.307435147943927,1.03371317267288,2.18120237686503,0.356497378384721,1.26414703174326,0,1.03135543248187,0,0.900305470156551,0.258717367565509,0.428674070063185,1.24138163549592,0.891844088010353,0.658196082408484,0.913394847343798,0.938686832254841,0,0.220528398054962,0.49465875882444,1.29171541356724,0.422190474497091,0.238744688006273,0.164140899745061,0.874442509889552,0.556275906031529,1.02522528478712,3.92135049130123,3.51869602002452,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,3.81868247206045,3.63786392618306,2.23651413839534,1.40406943068342,1.46361807210128,1.09181281873089,2.02296519577231,1.90102948168273,1.30877970992015,0.129614973291793,0,0,5.83114529571517,2.48187735685646,3.69457257853691,2.0665571756437,5.06868376472335,9.38857909166032,3.77592716047455,1.78260885523708,0.483168241652012,1.44015003128933,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,2.89784391048286,1.31377732815827,2.93042598827624,1.50057865355346,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.59609949360412,1.70733605754134,1.21553358534147,1.04806581313991,0.183843508450014,1.55572709461131,1.44224540067226,0.64183841918363,2.02157769411038,1.77435509923168,1.50901073108861,1.21733959710847,0.960377286073039,0.861532034334199,1.90517476513229,0.927074607558844,1.92909220463705,0.824171801606613,0.735994600671987,0,0.70990322463735,0.715308569841963,1.0174249164263,0.846984423737976,1.26921911837515,1.09756783723664,1.8414879800649,1.35804113845862,1.68342681497322,0.711810108745045,1.57607171800902,3.27384834535751,1.08455788830176,1.15743966588685,1.49886346762768,1.40358965067245,2.14871054048298,0.765153328275374,0.882365676478062,1.85494268496337
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.734187008646726,2.34717403304412,0.218025156380447,0,0,0,0,0,0,0,0.257259436035947,0.573066879877513,0,0.606949382578793,1.05798195854407,0,0.338844532069132,0,0,0,0,0,0,0.414758449233911,0.135005938331691,0,0.285650984403804,0.662605622854841,0.367472397644862,0,0,0,0.766124028511126,0.921639199537461,0.527545150920775,0.365950574409639,2.08365348222704,0.558365998002762,0,1.5279824777681,1.76777151284201,0.427115042397309,0.372798891650601,0.605809546665472,0.377857800533928,4.63783181922684,2.58127163094416,0,0,0.649776417447669,0.448026887097336,0.280888840263504,0.511290967734173,0.519572009205738,0,0.704217098883403,0,0,0,0.216491041011214,0,0,0.68510327831436,1.29468941823586,1.92974780784272,2.4287945747259,0,0.691846491768175,1.20578112442098,2.23418543557839,0.628332956648377,0,1.15679485535929,0,0.970601099684455,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0,0,0,0.898743836428936,0.457500602818626,0.125654352112864,0.869121600961382,0.767146371990992,1.0389402227978,1.29793010454206,3.97173519016234,0.622034853050465,0.252722758433675,0.210441855886474,0.390361328888111,0,0.900310649026746,1.05493372485001,0.408218994907967,1.0249097622788,0.374806898238915,0.517406741478031,0.646703978798527,1.51284864134255,1.05570674498369,0.657587197282725,0.834141747676794,0,0.61734640922383,6.36909653819178,0,0,0,0.621377317606506,0.938104239924385,0.36012412292203,1.18372367792605,0.590292695242212,0.462801338662135,0.930135779001631,0.268273401399619,0.934122738937356,0.329119699826961,1.14917224855367,0.810688095458557,1.31579988682799,0.219550115291051,0.805238512562231,1.68231958851302,0.823236899034275,0,0,2.13288250535234,1.62565670302307,1.28867461322093,1.00841762311671,0.444756087689741,0.760902504450237,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.58489226135736,0,0,0.199141273254367,2.65535061334314,4.22719496655997,6.76246414038483,3.25842124552503,2.32742984601151,6.52263124979963,5.69128834118316,1.77132177575523,3.1399745568275,1.97435462274881,0.889357881261447,0.667380422864376,1.17935397067922,0,0.405720242777006,0.482354319504834,0.25462585178142,0.863088412352432,0.972811360650212,1.09824565275233,1.43768206527355,0.744281895337007,0,0.505157755894224,0,1.4473305640901,1.66277871149944,1.51593129416388,2.44447464663039,2.20668611507745,3.75504397261603,9.21284415929987,3.80869825417622,2.53673742215138,4.09851374676097,3.10050565508285,3.34855014180723,2.29408640602033,2.93564469172023,2.4590339958857,0,0,0,0.275936746304732,0.321101179975584,0.234423373184406,0.655739781506702,0.757412781613119,1.26203287766503,1.17131623288992,1.72338718186239,0.238968797952552,1.55959071857676,0.849229592366497,0.809621403349789,0.876767573733936,1.18586333383957,0.642642632843614,4.11626247103979,1.78065603667255,4.0721739838394,4.28922319728592,0,0.971122544619926,2.11626489875326,0,0.590603785761546,0.307435147943927,1.03371317267288,2.18120237686503,0.356497378384721,1.26414703174326,0,1.03135543248187,0,0.900305470156551,0.258717367565509,0.428674070063185,1.24138163549592,0.891844088010353,0.658196082408484,0.913394847343798,0.938686832254841,0,0.220528398054962,0.49465875882444,1.29171541356724,0.422190474497091,0.238744688006273,0.164140899745061,0.874442509889552,0.556275906031529,1.02522528478712,3.92135049130123,3.51869602002452,0.376736914009382,0.27338845544205,0.228778173206523,0,0,0,3.81868247206045,3.63786392618306,2.23651413839534,1.40406943068342,1.46361807210128,1.09181281873089,2.02296519577231,1.90102948168273,1.30877970992015,0.129614973291793,0,0,5.83114529571517,2.48187735685646,3.69457257853691,2.0665571756437,5.06868376472335,9.38857909166032,3.77592716047455,1.78260885523708,0.483168241652012,1.44015003128933,0,0.202725215290164,0.205421914329655,0.129920822977795,0.358053391334963,0,0.240390899039938,0.295379054349154,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,2.89784391048286,1.31377732815827,2.93042598827624,1.50057865355346,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0.62272408550506,1.59609949360412,1.70733605754134,1.21553358534147,1.04806581313991,0.183843508450014,1.55572709461131,1.44224540067226,0.64183841918363,2.02157769411038,1.77435509923168,1.50901073108861,1.21733959710847,0.960377286073039,0.861532034334199,1.90517476513229,0.927074607558844,1.92909220463705,0.824171801606613,0.735994600671987,0,0.70990322463735,0.715308569841963,1.0174249164263,0.846984423737976,1.26921911837515,1.09756783723664,1.8414879800649,1.35804113845862,1.68342681497322,0.711810108745045,1.57607171800902,3.27384834535751,1.08455788830176,1.15743966588685,1.49886346762768,1.40358965067245,2.14871054048298,0.765153328275374,0.882365676478062,1.85494268496337
|short_description=p3@uc009hnk.1,p3@uc009hnl.1
|short_description=p3@uc009hnk.1,p3@uc009hnl.1
}}
}}

Latest revision as of 13:23, 5 August 2015

Short description:p3@uc009hnk.1, p3@uc009hnl.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_uc009hnk.1_5end, CAGE_peak_3_at_uc009hnl.1_5end
Coexpression cluster:MCL_coexpression_mm9:2472
Association with transcript: -56bp_to_uc009hnk.1, uc009hnl.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@uc009hnk.1p3@uc009hnl.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.61
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.64
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C52.43
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F51.21
adrenal gland, neonate N00.CNhs11191.1311-23C12.23
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I66.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F84.23
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I23.26
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G76.52
kidney, neonate N10.CNhs11206.758-6D55.69
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H61.18
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C52.21
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C62.54
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C72.94
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G64.29
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F23.52
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F55.83
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I52.07
testis, embryo E18.CNhs11027.503-18G55.07
testis, neonate N00.CNhs11189.1300-22B79.39
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D91.78
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.90
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
lung2.48e-1114
respiratory tube2.48e-1114
respiration organ2.48e-1114
pair of lungs2.48e-1114
lung primordium2.48e-1114
lung bud2.48e-1114
subdivision of trunk3.62e-1066
trunk region element5.18e-1079
gonad1.71e-0918
gonad primordium1.71e-0918
epithelial fold2.53e-0920
reproductive structure7.59e-0926
reproductive system7.59e-0926
reproductive organ1.08e-0824
external genitalia1.28e-0817
indifferent external genitalia1.28e-0817
indifferent gonad1.28e-0817
epithelial bud2.05e-0817
thoracic cavity element2.05e-0817
thoracic segment organ2.05e-0817
thoracic cavity2.05e-0817
thoracic segment of trunk2.05e-0817
respiratory primordium2.05e-0817
endoderm of foregut2.05e-0817
kidney2.28e-0814
kidney mesenchyme2.28e-0814
upper urinary tract2.28e-0814
kidney rudiment2.28e-0814
kidney field2.28e-0814
trunk1.23e-0790
body cavity1.29e-0737
body cavity or lining1.29e-0737
body cavity precursor3.24e-0738
renal system3.68e-0719
anatomical cavity7.72e-0739
urinary system structure8.60e-0718
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