FFCP PHASE1:Mm9::chr1:34254084..34254099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=186 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:34254084..34254099,+ | |||
|description=CAGE_peak_at_chr1:34254084..34254099,+ | |description=CAGE_peak_at_chr1:34254084..34254099,+ | ||
|id=chr1:34254084..34254099,+ | |id=chr1:34254084..34254099,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,8.94e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!9.31e-09!75;UBERON:0001016!9.31e-09!75;UBERON:0001017!1.25e-08!73;UBERON:0005743!1.25e-08!73;UBERON:0004121!2.77e-07!102;UBERON:0000924!2.77e-07!102;UBERON:0006601!2.77e-07!102;UBERON:0000955!4.58e-07!50;UBERON:0006238!4.58e-07!50;UBERON:0002616!5.49e-07!49;UBERON:0000033!9.71e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.03e-15,10;UBERON:0000411,3.03e-15,10;UBERON:0001950,3.03e-15,10;UBERON:0001017,1.60e-10,73;UBERON:0001016,4.61e-10,75;UBERON:0002619,8.04e-10,17;UBERON:0002020,3.43e-09,34;UBERON:0000073,4.79e-09,54;UBERON:0004121,1.11e-08,95;UBERON:0000924,1.11e-08,95;UBERON:0006601,1.11e-08,95;UBERON:0003528,3.34e-08,29;UBERON:0002791,3.34e-08,29;UBERON:0001893,3.34e-08,29;UBERON:0010314,4.14e-08,92;UBERON:0002346,4.89e-08,64;UBERON:0003075,4.89e-08,64;UBERON:0007284,4.89e-08,64;UBERON:0000956,1.67e-07,21;UBERON:0001869,1.67e-07,21;UBERON:0000203,1.67e-07,21;UBERON:0001049,3.76e-07,52;UBERON:0005068,3.76e-07,52;UBERON:0006241,3.76e-07,52;UBERON:0007135,3.76e-07,52;UBERON:0004684,8.94e-07,3;UBERON:0002275,8.94e-07,3 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,2.20231761998777,3.83062014255563,6.45147439676223,0.527545150920775,0.365950574409639,0,0.558365998002762,1.12552522006336,3.81995619442025,4.71405736757868,2.70506193518296,0.372798891650601,0.37863096666592,0.226714680320357,0,0,0,0,0.649776417447669,0,0.421333260395256,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,1.25654352112864,0.521472960576829,1.53429274398198,0.83115217823824,1.1356888414743,0.305518091550949,0.248813941220186,0,0.210441855886474,0.390361328888111,0,0.180062129805349,1.05493372485001,0.408218994907967,1.15302348256365,0,1.03481348295606,0,0,0,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0.196764231747404,0.771335564436891,1.39520366850245,1.07309360559848,0.583826711835847,0.987359099480883,2.29834449710733,1.13496333364198,1.60819986167866,3.07370161407471,0.268412837520744,0.630869845692382,1.3377599609307,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,2.69645822596266,2.16138049874694,0.199141273254367,0,0.571242563048644,0,0.203651327845314,1.35766741017338,1.26244475802573,0.885311519739602,5.90440591918409,1.41298855057237,0.616985819609003,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,18.6898668485561,0.372140947668503,0.624075346229121,0,0,0.482443521363367,0,0,0,0,0.469380496577004,0.335012514883631,0,0.975668239288994,0.315270288212382,0.44292937929755,0.956728611944923,1.63863314715738,0.863424909329478,0,0,0,0,0.551873492609465,0.963303539926752,1.28932855251423,0.163934945376675,1.51482556322624,0.315508219416257,0.390438744296638,1.50796378412959,1.67278158566786,1.11399337041197,0.566153061577665,0.404810701674894,1.46127928955656,1.58115111178609,0.321321316421807,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.713475270408282,0,0,0.469343416127421,0.847328283455281,0.220528398054962,0,0,0.301564624640779,0,0.328281799490123,1.7488850197791,1.29797711407357,0.170870880797853,0.206386867963223,0,0.188368457004691,0.820165366326151,0.457556346413045,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.0826534557253359,0,0.777689839750757,0,0,0,0,0.194451188344048,0.129159823477731,1.520605129417,1.05621514781179,2.0832701575032,0.629156066554265,0.724752362478018,0.576060012515731,0,0.202725215290164,0.308132871494482,0.649604114888975,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.228620419965,0.705783295957884,0.487289403698762,0.384847366561318,0.467507608726276,0.226730383615211,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0,0,0,3.95326289831947,2.76195141904306,8.02053718815155,2.23409137046794,0,6.0431511791176,2.02506750069542,3.60256962579376,5.89085131679466,4.65984280576638,0.207574695168353,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0,1.1921809497366,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.591026894253381,0.409231043169689,0.929621047115796,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 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|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0.771778308107841,0.286533439938757,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.287536413054709,0,2.20231761998777,3.83062014255563,6.45147439676223,0.527545150920775,0.365950574409639,0,0.558365998002762,1.12552522006336,3.81995619442025,4.71405736757868,2.70506193518296,0.372798891650601,0.37863096666592,0.226714680320357,0,0,0,0,0.649776417447669,0,0.421333260395256,0.511290967734173,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0,0,0.60289056221049,0.823120949949934,0.376999773989026,0,0,0,0.485300549842228,0.441683036920787,0,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0.748953197024114,0.915001205637253,1.25654352112864,0.521472960576829,1.53429274398198,0.83115217823824,1.1356888414743,0.305518091550949,0.248813941220186,0,0.210441855886474,0.390361328888111,0,0.180062129805349,1.05493372485001,0.408218994907967,1.15302348256365,0,1.03481348295606,0,0,0,0,0.834141747676794,0,0,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.180062061461015,0,0.196764231747404,0.771335564436891,1.39520366850245,1.07309360559848,0.583826711835847,0.987359099480883,2.29834449710733,1.13496333364198,1.60819986167866,3.07370161407471,0.268412837520744,0.630869845692382,1.3377599609307,0.330418782983798,0.264450566663544,0,0,0,0,0,0.190225626112559,1.42358718463353,0.823494773620054,1.25667604400135,0.596869416123452,0.779856348476481,2.69645822596266,2.16138049874694,0.199141273254367,0,0.571242563048644,0,0.203651327845314,1.35766741017338,1.26244475802573,0.885311519739602,5.90440591918409,1.41298855057237,0.616985819609003,0,0,0,0,0,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,18.6898668485561,0.372140947668503,0.624075346229121,0,0,0.482443521363367,0,0,0,0,0.469380496577004,0.335012514883631,0,0.975668239288994,0.315270288212382,0.44292937929755,0.956728611944923,1.63863314715738,0.863424909329478,0,0,0,0,0.551873492609465,0.963303539926752,1.28932855251423,0.163934945376675,1.51482556322624,0.315508219416257,0.390438744296638,1.50796378412959,1.67278158566786,1.11399337041197,0.566153061577665,0.404810701674894,1.46127928955656,1.58115111178609,0.321321316421807,0,0,0,0,0,0,0.604647113929502,0.188605079755898,0,0.307435147943927,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.713475270408282,0,0,0.469343416127421,0.847328283455281,0.220528398054962,0,0,0.301564624640779,0,0.328281799490123,1.7488850197791,1.29797711407357,0.170870880797853,0.206386867963223,0,0.188368457004691,0.820165366326151,0.457556346413045,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,0.674321731924103,0.0826534557253359,0,0.777689839750757,0,0,0,0,0.194451188344048,0.129159823477731,1.520605129417,1.05621514781179,2.0832701575032,0.629156066554265,0.724752362478018,0.576060012515731,0,0.202725215290164,0.308132871494482,0.649604114888975,0.179026695667481,0,0.240390899039938,0,0.100966449948148,0.228620419965,0.705783295957884,0.487289403698762,0.384847366561318,0.467507608726276,0.226730383615211,0,0.0897138566094757,0.503653849092235,0.19318959403219,0.187682475451182,0,0,0,3.95326289831947,2.76195141904306,8.02053718815155,2.23409137046794,0,6.0431511791176,2.02506750069542,3.60256962579376,5.89085131679466,4.65984280576638,0.207574695168353,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0.252697211763798,0,0,0.280924522409647,0.128050304809739,0.17230640686684,0,0.347652977834566,0.38581844092741,0.412085900803307,0.441596760403192,1.37147700954166,0,1.1921809497366,0.290692833264657,0.0941093804153306,0.169229215783353,0.548783918618318,0.263069711437843,0.543216455383447,0,0.237270036248348,0.591026894253381,0.409231043169689,0.929621047115796,0.192906610981141,0,0.233931608445408,0,0.191288332068843,0.220591419119515,0 | ||
|short_description=p@chr1:34254084..34254099,+ | |short_description=p@chr1:34254084..34254099,+ | ||
}} | }} |
Latest revision as of 14:13, 5 August 2015
Short description: | p@chr1:34254084..34254099, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:34254084..34254099, + |
Coexpression cluster: | MCL_coexpression_mm9:186 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 8.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.03e-15 | 10 |
visual cortex | 3.03e-15 | 10 |
neocortex | 3.03e-15 | 10 |
central nervous system | 1.60e-10 | 73 |
nervous system | 4.61e-10 | 75 |
regional part of cerebral cortex | 8.04e-10 | 17 |
gray matter | 3.43e-09 | 34 |
regional part of nervous system | 4.79e-09 | 54 |
ectoderm-derived structure | 1.11e-08 | 95 |
ectoderm | 1.11e-08 | 95 |
presumptive ectoderm | 1.11e-08 | 95 |
brain grey matter | 3.34e-08 | 29 |
regional part of telencephalon | 3.34e-08 | 29 |
telencephalon | 3.34e-08 | 29 |
structure with developmental contribution from neural crest | 4.14e-08 | 92 |
neurectoderm | 4.89e-08 | 64 |
neural plate | 4.89e-08 | 64 |
presumptive neural plate | 4.89e-08 | 64 |
cerebral cortex | 1.67e-07 | 21 |
cerebral hemisphere | 1.67e-07 | 21 |
pallium | 1.67e-07 | 21 |
neural tube | 3.76e-07 | 52 |
neural rod | 3.76e-07 | 52 |
future spinal cord | 3.76e-07 | 52 |
neural keel | 3.76e-07 | 52 |
raphe nuclei | 8.94e-07 | 3 |
reticular formation | 8.94e-07 | 3 |