FFCP PHASE1:Mm9::chr3:107544384..107544414,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1451 | |MCL_coexpression_id=1451 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:107544384..107544414,- | |||
|description=CAGE_peak_at_chr3:107544384..107544414,- | |description=CAGE_peak_at_chr3:107544384..107544414,- | ||
|id=chr3:107544384..107544414,- | |id=chr3:107544384..107544414,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.98e-14,6;CL:0000187,1.98e-14,6;CL:0000056,1.98e-14,6;CL:0002453,1.34e-12,8;CL:0000222,3.10e-12,7;CL:0000333,7.51e-10,10;CL:0000095,7.51e-10,10;CL:0000243,7.51e-10,10;CL:0000123,7.51e-10,10;CL:0000125,7.51e-10,10;CL:0000030,7.51e-10,10;CL:0000339,7.51e-10,10;CL:0000355,2.62e-09,9;CL:0000128,5.56e-09,6;CL:0000126,5.56e-09,6;CL:0000127,5.56e-09,6;CL:0002494,3.62e-08,3;CL:0000737,3.62e-08,3;CL:0000746,3.62e-08,3;CL:0000513,3.62e-08,3;CL:0000192,7.07e-08,3;CL:0000359,7.07e-08,3;CL:0002539,7.07e-08,3;CL:0000514,7.07e-08,3;CL:0002092,8.67e-08,3;CL:0002540,8.67e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.62e-09,9;UBERON:0002036,2.62e-09,9;UBERON:0002385,2.62e-09,9;UBERON:0000486,2.62e-09,9;UBERON:0007503,2.62e-09,9;UBERON:0001015,2.62e-09,9;UBERON:0002329,2.62e-09,9;UBERON:0003082,2.62e-09,9;UBERON:0003059,2.62e-09,9;UBERON:0007282,2.62e-09,9;UBERON:0004290,2.62e-09,9;UBERON:0009618,2.62e-09,9;UBERON:0000383,2.78e-08,10;UBERON:0002204,5.11e-08,32;UBERON:0001135,7.07e-08,3;UBERON:0004237,7.07e-08,3;UBERON:0004695,7.07e-08,3;UBERON:0002111,7.07e-08,3;UBERON:0004178,7.07e-08,3;UBERON:0007524,1.91e-07,11;UBERON:0003077,1.91e-07,11;UBERON:0007285,1.91e-07,11 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,9.4422613481683,7.40051597902456,7.52541683862894,2.34717403304412,2.39827672018491,3.07560655828261,4.27745777963423,1.53985063787899,0,0.167782606057736,0,0,21.3525331909836,9.45560351797897,9.7977697532714,0,0,0,2.03306719241479,0,9.89889689009539,5.93319817540185,4.9733608046227,1.79760066311043,3.45796474789399,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,8.52151612890289,5.19572009205738,7.0667914902068,0,1.28326477414318,0,0,0,0,0,0,0.776813650941515,1.03909497345377,0.346970653532272,0,0.461230994512117,0.452167921657868,0.587943535678524,0.251333182659351,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,0.251308704225729,0.521472960576829,0,1.0389402227978,0.486723789203273,1.42575109390443,0.373220911830279,0,0.420883711772948,0.260240885925407,0.229902104433473,0,0.60281927134286,0.408218994907967,0.384341160854549,0.374806898238915,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0,0,0,0.621377317606506,0,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.493679549740441,1.31333971263276,0.405344047729279,0.584799949701329,1.09775057645525,0.402619256281115,0.630869845692382,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0.902072229254653,0.80673409849337,0.22237804384487,0.760902504450237,0.474529061544512,0,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0.889357881261447,0,0.196558995113203,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0,0.585400943573396,0.157635144106191,1.10732344824387,0.637819074629948,0.491589944147214,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,1.12385412991454,0.703270119553219,3.11476396215683,0,0.315508219416257,0,0.215423397732799,0,0.668396022247182,0,0,1.16902343164525,0.395287777946524,0.642642632843614,0.567760340833074,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.913394847343798,0.469343416127421,1.27099242518292,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,1.11255181206306,0.854354403989263,0.619160603889667,0.555583582109135,0.188368457004691,0.956859594047176,0.686334519619568,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.540026704109006,0.836353184057875,0.218362563746178,0.539457385539283,0.743881101528023,0.523511883968059,0.388844919875379,1.24267862617385,0,0.299033092087958,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.405450430580328,0.718976700153791,0.51968329191118,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.233753804363138,0.226730383615211,0.443971906748129,0,1.51096154727671,0.579568782096571,18.3928825942158,0.549454872801795,0,1.50471631210609,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,0,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,1.02860775715625,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,1.32354851471709,0 | |phase1_expression=0,0.348975407639361,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.0992909512008853,0,0.319984845586813,0.45881856213434,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,9.4422613481683,7.40051597902456,7.52541683862894,2.34717403304412,2.39827672018491,3.07560655828261,4.27745777963423,1.53985063787899,0,0.167782606057736,0,0,21.3525331909836,9.45560351797897,9.7977697532714,0,0,0,2.03306719241479,0,9.89889689009539,5.93319817540185,4.9733608046227,1.79760066311043,3.45796474789399,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.255374676170375,0.921639199537461,0,0,0,0.558365998002762,0.56276261003168,0.61119299110724,0.294628585473668,0.427115042397309,0,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.280888840263504,8.52151612890289,5.19572009205738,7.0667914902068,0,1.28326477414318,0,0,0,0,0,0,0.776813650941515,1.03909497345377,0.346970653532272,0,0.461230994512117,0.452167921657868,0.587943535678524,0.251333182659351,0.247194967734374,0.578397427679647,0,0.970601099684455,0.220841518460394,2.42437626567611,0,0.585561594023094,1.04723353406728,0.255457055208591,0,0,0,0.898743836428936,0.915001205637253,0.251308704225729,0.521472960576829,0,1.0389402227978,0.486723789203273,1.42575109390443,0.373220911830279,0,0.420883711772948,0.260240885925407,0.229902104433473,0,0.60281927134286,0.408218994907967,0.384341160854549,0.374806898238915,0.517406741478031,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0,0,0,0.621377317606506,0,0.720248245844059,0.23674473558521,0.196764231747404,0,0,0,0.350296027101508,0.493679549740441,1.31333971263276,0.405344047729279,0.584799949701329,1.09775057645525,0.402619256281115,0.630869845692382,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0.902072229254653,0.80673409849337,0.22237804384487,0.760902504450237,0.474529061544512,0,0.754005626400808,0.596869416123452,0.779856348476481,0.898819408654221,0,0.199141273254367,0,0.228497025219458,1.1270773567308,0.203651327845314,0.387904974335251,0.140271639780637,0.189709611372772,0,0.31399745568275,0.123397163921801,0.889357881261447,0,0.196558995113203,0.449724224769707,0,0.241177159752417,0.50925170356284,0.287696137450811,0.162135226775035,0,1.43768206527355,0.744281895337007,0,0.252578877947112,0.179397413521912,0,1.10851914099963,0,0.162964976442026,0.169745085775188,0.469380496577004,0.335012514883631,0,0.585400943573396,0.157635144106191,1.10732344824387,0.637819074629948,0.491589944147214,0.518054945597687,0.433947175744535,0,0.54390568381871,0.983528546038072,0.551873492609465,1.12385412991454,0.703270119553219,3.11476396215683,0,0.315508219416257,0,0.215423397732799,0,0.668396022247182,0,0,1.16902343164525,0.395287777946524,0.642642632843614,0.567760340833074,0.178065603667255,0.325773918707152,0.659880491890142,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0.18006109403131,0.258717367565509,0.214337035031592,0.354680467284547,0.178368817602071,0.493647061806363,0.913394847343798,0.469343416127421,1.27099242518292,0,0.32977250588296,0.161464426695906,0.241251699712623,0.119372344003136,0.328281799490123,0,1.11255181206306,0.854354403989263,0.619160603889667,0.555583582109135,0.188368457004691,0.956859594047176,0.686334519619568,0,0,0,1.90934123603023,0.316335993581135,0.203319467126849,0.540026704109006,0.836353184057875,0.218362563746178,0.539457385539283,0.743881101528023,0.523511883968059,0.388844919875379,1.24267862617385,0,0.299033092087958,0,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0.2604087696879,0,0.241584120826006,0,0,0.405450430580328,0.718976700153791,0.51968329191118,0,0.198681354781265,0,0.147689527174577,0.100966449948148,0.0762068066549998,0,0,0,0.233753804363138,0.226730383615211,0.443971906748129,0,1.51096154727671,0.579568782096571,18.3928825942158,0.549454872801795,0,1.50471631210609,0,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0.399024873401031,0.512200817262403,0,0.209613162627982,0.183843508450014,0.666740183404846,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.565879024158229,0.280924522409647,0.0640251524048693,0.17230640686684,0,0.115884325944855,0,0.824171801606613,0.147198920134397,1.02860775715625,0.177475806159338,0,0.290692833264657,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.429742108096597,0.57386499620653,1.32354851471709,0 | ||
|short_description=p@chr3:107544384..107544414,- | |short_description=p@chr3:107544384..107544414,- | ||
}} | }} |
Latest revision as of 20:32, 5 August 2015
Short description: | p@chr3:107544384..107544414, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:107544384..107544414, - |
Coexpression cluster: | MCL_coexpression_mm9:1451 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.98e-14 | 6 |
muscle cell | 1.98e-14 | 6 |
myoblast | 1.98e-14 | 6 |
oligodendrocyte precursor cell | 1.34e-12 | 8 |
mesodermal cell | 3.10e-12 | 7 |
migratory neural crest cell | 7.51e-10 | 10 |
neuron associated cell | 7.51e-10 | 10 |
glial cell (sensu Vertebrata) | 7.51e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 7.51e-10 | 10 |
glial cell | 7.51e-10 | 10 |
glioblast | 7.51e-10 | 10 |
glioblast (sensu Vertebrata) | 7.51e-10 | 10 |
multi-potent skeletal muscle stem cell | 2.62e-09 | 9 |
oligodendrocyte | 5.56e-09 | 6 |
macroglial cell | 5.56e-09 | 6 |
astrocyte | 5.56e-09 | 6 |
cardiocyte | 3.62e-08 | 3 |
striated muscle cell | 3.62e-08 | 3 |
cardiac muscle cell | 3.62e-08 | 3 |
cardiac muscle myoblast | 3.62e-08 | 3 |
smooth muscle cell | 7.07e-08 | 3 |
vascular associated smooth muscle cell | 7.07e-08 | 3 |
aortic smooth muscle cell | 7.07e-08 | 3 |
smooth muscle myoblast | 7.07e-08 | 3 |
bone marrow cell | 8.67e-08 | 3 |
mesenchymal stem cell of the bone marrow | 8.67e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.62e-09 | 9 |
striated muscle tissue | 2.62e-09 | 9 |
muscle tissue | 2.62e-09 | 9 |
multilaminar epithelium | 2.62e-09 | 9 |
epithelial vesicle | 2.62e-09 | 9 |
musculature | 2.62e-09 | 9 |
somite | 2.62e-09 | 9 |
myotome | 2.62e-09 | 9 |
presomitic mesoderm | 2.62e-09 | 9 |
presumptive segmental plate | 2.62e-09 | 9 |
dermomyotome | 2.62e-09 | 9 |
trunk paraxial mesoderm | 2.62e-09 | 9 |
musculature of body | 2.78e-08 | 10 |
musculoskeletal system | 5.11e-08 | 32 |
smooth muscle tissue | 7.07e-08 | 3 |
blood vessel smooth muscle | 7.07e-08 | 3 |
arterial system smooth muscle | 7.07e-08 | 3 |
artery smooth muscle tissue | 7.07e-08 | 3 |
aorta smooth muscle tissue | 7.07e-08 | 3 |
dense mesenchyme tissue | 1.91e-07 | 11 |
paraxial mesoderm | 1.91e-07 | 11 |
presumptive paraxial mesoderm | 1.91e-07 | 11 |