FFCP PHASE1:Mm9::chr8:37808165..37808189,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:37808165..37808189,+ | |||
|description=CAGE_peak_at_chr8:37808165..37808189,+ | |description=CAGE_peak_at_chr8:37808165..37808189,+ | ||
|id=chr8:37808165..37808189,+ | |id=chr8:37808165..37808189,+ | ||
|ontology_enrichment_celltype=CL:0000068!1.65e-10!3;CL:0002202!1.65e-10!3;CL:0000069!1.65e-10!3;CL:0002632!1.65e-10!3;CL:0002368!1.65e-10!3;CL:0000307!1.65e-10!3;CL:0000377!1.65e-10!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.51e-52,3;CL:0002202,5.51e-52,3;CL:0000069,5.51e-52,3;CL:0002632,5.51e-52,3;CL:0002368,5.51e-52,3;CL:0000307,5.51e-52,3;CL:0000377,5.51e-52,3;CL:0000223,2.48e-22,20;CL:0002076,4.06e-19,15;CL:0000213,5.15e-19,1;CL:0002078,5.15e-19,1;CL:0000115,5.15e-19,1;CL:0002262,5.15e-19,1;CL:1000398,5.15e-19,1;CL:0000066,5.10e-18,25;CL:0000215,3.18e-07,3;CL:0002293,3.64e-07,3;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!4.45e-13!17;UBERON:0005181!4.45e-13!17;UBERON:0002224!4.45e-13!17;UBERON:0000915!4.45e-13!17;UBERON:0008947!4.45e-13!17;UBERON:0003258!4.45e-13!17;UBERON:0003126!1.65e-10!3;UBERON:0001005!1.65e-10!3;UBERON:0007196!1.65e-10!3;UBERON:0001558!1.65e-10!3;UBERON:0002048!5.05e-07!14;UBERON:0000117!5.05e-07!14;UBERON:0000171!5.05e-07!14;UBERON:0000170!5.05e-07!14;UBERON:0005597!5.05e-07!14;UBERON:0000118!5.05e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.51e-52,3;UBERON:0001005,5.51e-52,3;UBERON:0007196,5.51e-52,3;UBERON:0001558,5.51e-52,3;UBERON:0002394,5.15e-19,1;UBERON:0001281,5.15e-19,1;UBERON:0000353,5.15e-19,1;UBERON:0003497,5.15e-19,1;UBERON:0003909,5.15e-19,1;UBERON:0003928,5.15e-19,1;UBERON:0003835,5.15e-19,1;UBERON:0003513,5.15e-19,1;UBERON:0001280,5.15e-19,1;UBERON:0004647,5.15e-19,1;UBERON:0002294,5.15e-19,1;UBERON:0001173,5.15e-19,1;UBERON:0004912,5.15e-19,1;UBERON:0005171,5.15e-19,1;UBERON:0000072,6.04e-11,27;UBERON:0005178,6.13e-10,17;UBERON:0005181,6.13e-10,17;UBERON:0002224,6.13e-10,17;UBERON:0000915,6.13e-10,17;UBERON:0008947,6.13e-10,17;UBERON:0003258,6.13e-10,17;UBERON:0000065,2.04e-07,41;UBERON:0001004,2.97e-07,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,15.0729534124872,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,1.08245520505607,2.02687892380079,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,15.0729534124872,0,0,0,0,0,0,0,0,0,0,0,2.54805239706646,0,1.08245520505607,2.02687892380079,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr8:37808165..37808189,+ | |short_description=p@chr8:37808165..37808189,+ | ||
}} | }} |
Latest revision as of 09:38, 6 August 2015
Short description: | p@chr8:37808165..37808189, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:37808165..37808189, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 5.51e-52 | 3 |
epithelial cell of tracheobronchial tree | 5.51e-52 | 3 |
branched duct epithelial cell | 5.51e-52 | 3 |
epithelial cell of lower respiratory tract | 5.51e-52 | 3 |
respiratory epithelial cell | 5.51e-52 | 3 |
tracheal epithelial cell | 5.51e-52 | 3 |
tracheoblast | 5.51e-52 | 3 |
endodermal cell | 2.48e-22 | 20 |
endo-epithelial cell | 4.06e-19 | 15 |
lining cell | 5.15e-19 | 1 |
meso-epithelial cell | 5.15e-19 | 1 |
endothelial cell | 5.15e-19 | 1 |
endothelial cell of sinusoid | 5.15e-19 | 1 |
endothelial cell of hepatic sinusoid | 5.15e-19 | 1 |
epithelial cell | 5.10e-18 | 25 |
barrier cell | 3.18e-07 | 3 |
epithelial cell of thymus | 3.64e-07 | 3 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
trachea | 5.51e-52 | 3 |
respiratory airway | 5.51e-52 | 3 |
tracheobronchial tree | 5.51e-52 | 3 |
lower respiratory tract | 5.51e-52 | 3 |
bile duct | 5.15e-19 | 1 |
hepatic sinusoid | 5.15e-19 | 1 |
parenchyma | 5.15e-19 | 1 |
abdomen blood vessel | 5.15e-19 | 1 |
sinusoid | 5.15e-19 | 1 |
digestive system duct | 5.15e-19 | 1 |
abdominal segment blood vessel | 5.15e-19 | 1 |
trunk blood vessel | 5.15e-19 | 1 |
liver parenchyma | 5.15e-19 | 1 |
liver lobule | 5.15e-19 | 1 |
biliary system | 5.15e-19 | 1 |
biliary tree | 5.15e-19 | 1 |
biliary bud | 5.15e-19 | 1 |
hepatic duct | 5.15e-19 | 1 |
segment of respiratory tract | 6.04e-11 | 27 |
thoracic cavity element | 6.13e-10 | 17 |
thoracic segment organ | 6.13e-10 | 17 |
thoracic cavity | 6.13e-10 | 17 |
thoracic segment of trunk | 6.13e-10 | 17 |
respiratory primordium | 6.13e-10 | 17 |
endoderm of foregut | 6.13e-10 | 17 |
respiratory tract | 2.04e-07 | 41 |
respiratory system | 2.97e-07 | 42 |