FFCP PHASE1:Mm9::chr19:21788330..21788351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=821 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:21788330..21788351,+ | |||
|description=CAGE_peak_at_chr19:21788330..21788351,+ | |description=CAGE_peak_at_chr19:21788330..21788351,+ | ||
|id=chr19:21788330..21788351,+ | |id=chr19:21788330..21788351,+ | ||
|ontology_enrichment_celltype=CL:0000838!6.32e-08!12;CL:0000084!3.45e-07!11;CL:0000827!3.45e-07!11;CL:0000542!6.07e-07!13;CL:0000051!6.07e-07!13 | |ontology_enrichment_celltype=CL:0000838!6.32e-08!12;CL:0000084!3.45e-07!11;CL:0000827!3.45e-07!11;CL:0000542!6.07e-07!13;CL:0000051!6.07e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,2.52e-10,25;CL:0000553,2.84e-09,6;CL:0000556,2.84e-09,6;CL:0000838,3.43e-08,12;CL:0000988,1.79e-07,32;CL:0002032,1.79e-07,32;CL:0000037,1.79e-07,32;CL:0000837,1.79e-07,32;CL:0000542,1.80e-07,13;CL:0000051,1.80e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.93e-14!29;UBERON:0002193!1.28e-12!48;UBERON:0002390!5.43e-12!45;UBERON:0003061!5.43e-12!45;UBERON:0003408!7.09e-12!24;UBERON:0006562!1.47e-11!24;UBERON:0001557!1.47e-11!24;UBERON:0001042!1.47e-11!24;UBERON:0008814!1.47e-11!24;UBERON:0009145!1.47e-11!24;UBERON:0002370!1.88e-11!23;UBERON:0000974!1.88e-11!23;UBERON:0004807!1.88e-11!23;UBERON:0005058!1.88e-11!23;UBERON:0003351!1.88e-11!23;UBERON:0009113!1.88e-11!23;UBERON:0003295!1.88e-11!23;UBERON:0009722!1.88e-11!23;UBERON:0005562!1.88e-11!23;UBERON:0007690!1.88e-11!23;UBERON:0000072!3.18e-09!27;UBERON:0000063!3.12e-08!35;UBERON:0002405!5.51e-08!70;UBERON:0005057!2.03e-07!51;UBERON:0001004!4.01e-07!42;UBERON:0000065!9.04e-07!41 | |ontology_enrichment_uberon=UBERON:0004177!2.93e-14!29;UBERON:0002193!1.28e-12!48;UBERON:0002390!5.43e-12!45;UBERON:0003061!5.43e-12!45;UBERON:0003408!7.09e-12!24;UBERON:0006562!1.47e-11!24;UBERON:0001557!1.47e-11!24;UBERON:0001042!1.47e-11!24;UBERON:0008814!1.47e-11!24;UBERON:0009145!1.47e-11!24;UBERON:0002370!1.88e-11!23;UBERON:0000974!1.88e-11!23;UBERON:0004807!1.88e-11!23;UBERON:0005058!1.88e-11!23;UBERON:0003351!1.88e-11!23;UBERON:0009113!1.88e-11!23;UBERON:0003295!1.88e-11!23;UBERON:0009722!1.88e-11!23;UBERON:0005562!1.88e-11!23;UBERON:0007690!1.88e-11!23;UBERON:0000072!3.18e-09!27;UBERON:0000063!3.12e-08!35;UBERON:0002405!5.51e-08!70;UBERON:0005057!2.03e-07!51;UBERON:0001004!4.01e-07!42;UBERON:0000065!9.04e-07!41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.14e-18,48;UBERON:0002405,1.14e-18,48;UBERON:0002390,3.72e-18,45;UBERON:0003061,3.72e-18,45;UBERON:0004177,1.67e-17,29;UBERON:0005057,1.67e-17,29;UBERON:0002370,3.65e-15,23;UBERON:0000974,3.65e-15,23;UBERON:0004807,3.65e-15,23;UBERON:0005058,3.65e-15,23;UBERON:0003351,3.65e-15,23;UBERON:0009113,3.65e-15,23;UBERON:0003295,3.65e-15,23;UBERON:0009722,3.65e-15,23;UBERON:0005562,3.65e-15,23;UBERON:0007690,3.65e-15,23;UBERON:0006562,2.16e-14,24;UBERON:0003408,2.16e-14,24;UBERON:0001557,2.16e-14,24;UBERON:0001042,2.16e-14,24;UBERON:0008814,2.16e-14,24;UBERON:0009145,2.16e-14,24;UBERON:0000077,8.96e-14,35;UBERON:0000072,2.03e-12,27;UBERON:0000065,2.46e-09,41;UBERON:0000926,3.74e-09,120;UBERON:0004120,3.74e-09,120;UBERON:0006603,3.74e-09,120;UBERON:0001004,5.03e-09,42;UBERON:0007811,1.68e-08,36;UBERON:0003081,1.89e-08,87 | |||
|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.140788722151667,0.468129052643987,0.68487187290202,0.717949430958028,5.30722262786738,3.4093956943409,1.66554880907831,1.61980213911861,0,7.09789872056035,11.6547268564878,6.79023442876848,1.02051948181284,1.88652807281682,3.91799683708403,0.95995453676044,0,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0,1.94204141212461,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,3.35565212115473,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,2.54805239706646,0,0,0,0,0.5709193985953,11.6522047641227,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0.41557608911912,0,0,1.24406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0,0.189709611372772,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.690739927463582,1.01254341007058,0,0,0,0.551873492609465,0.80275294993896,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.27746076687442,0,0,1.31976098378028,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,3.40439605753788,0,0,0.214337035031592,1.06404140185364,0.713475270408282,1.48094118541909,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0.927126510052548,4.78438466233988,0.412773735926445,0.555583582109135,0.188368457004691,1.91371918809435,2.28778173206523,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.203319467126849,0,0.418176592028937,0,0,0.165306911450672,0,0,0.621339313086926,8.45539408026285,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0,0,0.209718688851422,3.38217769156408,4.32045009386798,3.47612232690996,0.608175645870493,2.15693010046137,2.20865399062252,1.25318686967237,1.78813219303138,0.961563596159751,1.9199638532695,2.01932899896295,1.5241361331,0.604957110821043,2.72882066071307,2.69393156592922,2.45441494581295,0.226730383615211,0,0,0,0,0.563047426353546,2.56412273974171,0.643105137237198,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0,2.06597317506522,0.140788722151667,0.468129052643987,0.68487187290202,0.717949430958028,5.30722262786738,3.4093956943409,1.66554880907831,1.61980213911861,0,7.09789872056035,11.6547268564878,6.79023442876848,1.02051948181284,1.88652807281682,3.91799683708403,0.95995453676044,0,0,0,0,0,0.504060259519861,0.221730510655305,0,0,0,0,0,0,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0,1.94204141212461,0.125896817975577,0,0.183546752161682,0,0.218025156380447,0,0,0.139986421625363,0,3.35565212115473,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0.255374676170375,0.153606533256243,0.131886287730194,0,0,0,0,0,0,0,0.186399445825301,0,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.421333260395256,0,0,0,0,0,2.54805239706646,0,0,0,0,0.5709193985953,11.6522047641227,0.148442139064825,0,0,0,0,0.117588707135705,0.125666591329675,0,0.289198713839823,1.76922110389975,0.161766849947409,0.662524555381181,0.969750506270444,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0.41557608911912,0,0,1.24406970610093,0.252722758433675,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0.411564272815887,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0.210289948564127,0,0.991256348951394,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0.387904974335251,0,0.189709611372772,0.442830443938806,0.156998727841375,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.482354319504834,0,0.575392274901621,0.324270453550071,0,0,0,0,0,0,0,1.10851914099963,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0,0.163863314715738,0.690739927463582,1.01254341007058,0,0,0,0.551873492609465,0.80275294993896,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,1.27746076687442,0,0,1.31976098378028,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,3.40439605753788,0,0,0.214337035031592,1.06404140185364,0.713475270408282,1.48094118541909,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0.927126510052548,4.78438466233988,0.412773735926445,0.555583582109135,0.188368457004691,1.91371918809435,2.28778173206523,0.679913719975421,0.69975726161829,0.414599921413271,0,0,0.203319467126849,0,0.418176592028937,0,0,0.165306911450672,0,0,0.621339313086926,8.45539408026285,0,0.165458490457098,0.194451188344048,0.387479470433193,0.168956125490778,0,0,0.209718688851422,3.38217769156408,4.32045009386798,3.47612232690996,0.608175645870493,2.15693010046137,2.20865399062252,1.25318686967237,1.78813219303138,0.961563596159751,1.9199638532695,2.01932899896295,1.5241361331,0.604957110821043,2.72882066071307,2.69393156592922,2.45441494581295,0.226730383615211,0,0,0,0,0.563047426353546,2.56412273974171,0.643105137237198,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.320125762024346,0.17230640686684,0,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0.238436189947321,0.290692833264657,0,0.25384382367503,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0.220591419119515,0 | ||
|short_description=p@chr19:21788330..21788351,+ | |short_description=p@chr19:21788330..21788351,+ | ||
}} | }} |
Latest revision as of 09:39, 6 August 2015
Short description: | p@chr19:21788330..21788351, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:21788330..21788351, + |
Coexpression cluster: | MCL_coexpression_mm9:821 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 2.52e-10 | 25 |
megakaryocyte progenitor cell | 2.84e-09 | 6 |
megakaryocyte | 2.84e-09 | 6 |
lymphoid lineage restricted progenitor cell | 3.43e-08 | 12 |
hematopoietic cell | 1.79e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.79e-07 | 32 |
hematopoietic stem cell | 1.79e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.79e-07 | 32 |
lymphocyte | 1.80e-07 | 13 |
common lymphoid progenitor | 1.80e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.14e-18 | 48 |
immune system | 1.14e-18 | 48 |
hematopoietic system | 3.72e-18 | 45 |
blood island | 3.72e-18 | 45 |
hemopoietic organ | 1.67e-17 | 29 |
immune organ | 1.67e-17 | 29 |
thymus | 3.65e-15 | 23 |
neck | 3.65e-15 | 23 |
respiratory system epithelium | 3.65e-15 | 23 |
hemolymphoid system gland | 3.65e-15 | 23 |
pharyngeal epithelium | 3.65e-15 | 23 |
thymic region | 3.65e-15 | 23 |
pharyngeal gland | 3.65e-15 | 23 |
entire pharyngeal arch endoderm | 3.65e-15 | 23 |
thymus primordium | 3.65e-15 | 23 |
early pharyngeal endoderm | 3.65e-15 | 23 |
pharynx | 2.16e-14 | 24 |
gland of gut | 2.16e-14 | 24 |
upper respiratory tract | 2.16e-14 | 24 |
chordate pharynx | 2.16e-14 | 24 |
pharyngeal arch system | 2.16e-14 | 24 |
pharyngeal region of foregut | 2.16e-14 | 24 |
mixed endoderm/mesoderm-derived structure | 8.96e-14 | 35 |
segment of respiratory tract | 2.03e-12 | 27 |
respiratory tract | 2.46e-09 | 41 |
mesoderm | 3.74e-09 | 120 |
mesoderm-derived structure | 3.74e-09 | 120 |
presumptive mesoderm | 3.74e-09 | 120 |
respiratory system | 5.03e-09 | 42 |
craniocervical region | 1.68e-08 | 36 |
lateral plate mesoderm | 1.89e-08 | 87 |