FFCP PHASE1:Mm9::chr11:69414336..69414343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=791 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:69414336..69414343,- | |||
|description=CAGE_peak_at_chr11:69414336..69414343,- | |description=CAGE_peak_at_chr11:69414336..69414343,- | ||
|id=chr11:69414336..69414343,- | |id=chr11:69414336..69414343,- | ||
|ontology_enrichment_celltype=CL:0002453!3.36e-11!8;CL:0002319!1.00e-08!43;CL:0000333!1.55e-08!10;CL:0000095!1.55e-08!10;CL:0000243!1.55e-08!10;CL:0000123!1.55e-08!10;CL:0000125!1.55e-08!10;CL:0000030!1.55e-08!10;CL:0000339!1.55e-08!10;CL:0000128!1.82e-08!6;CL:0000126!1.82e-08!6;CL:0000127!1.82e-08!6;CL:0000221!2.18e-08!44;CL:0000133!2.18e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.87e-17,2;CL:0000129,1.87e-17,2;CL:0002453,1.67e-16,8;CL:0000333,2.82e-13,10;CL:0000095,2.82e-13,10;CL:0000243,2.82e-13,10;CL:0000123,2.82e-13,10;CL:0000125,2.82e-13,10;CL:0000030,2.82e-13,10;CL:0000339,2.82e-13,10;CL:0002614,2.23e-11,3;CL:0002194,3.35e-09,4;CL:0000766,3.35e-09,4;CL:0000234,3.35e-09,4;CL:0000576,3.35e-09,4;CL:0000235,3.35e-09,4;CL:0000864,3.35e-09,4;CL:0002009,3.35e-09,4;CL:0000040,3.35e-09,4;CL:0000559,3.35e-09,4;CL:0002319,1.03e-08,43;CL:0000221,1.66e-08,44;CL:0000133,1.66e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.93e-22!73;UBERON:0005743!9.93e-22!73;UBERON:0000073!8.44e-21!75;UBERON:0001016!8.44e-21!75;UBERON:0001049!6.78e-19!52;UBERON:0005068!6.78e-19!52;UBERON:0006241!6.78e-19!52;UBERON:0007135!6.78e-19!52;UBERON:0002616!1.12e-17!49;UBERON:0000955!3.97e-17!50;UBERON:0006238!3.97e-17!50;UBERON:0004121!3.73e-16!102;UBERON:0000924!3.73e-16!102;UBERON:0006601!3.73e-16!102;UBERON:0002346!5.96e-15!71;UBERON:0003075!5.96e-15!71;UBERON:0007284!5.96e-15!71;UBERON:0000033!1.08e-14!63;UBERON:0002020!1.91e-11!34;UBERON:0003080!1.31e-10!40;UBERON:0003076!2.50e-10!12;UBERON:0003057!2.50e-10!12;UBERON:0003056!3.47e-10!49;UBERON:0002780!5.14e-10!39;UBERON:0001890!5.14e-10!39;UBERON:0006240!5.14e-10!39;UBERON:0002791!1.14e-08!29;UBERON:0003528!1.14e-08!29;UBERON:0001893!1.14e-08!29;UBERON:0007811!3.52e-08!86;UBERON:0000153!9.93e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,2.23e-11,3;UBERON:0009663,2.23e-11,3;UBERON:0009661,2.23e-11,3;UBERON:0000125,2.23e-11,3;UBERON:0002308,2.23e-11,3;UBERON:0001017,2.79e-10,73;UBERON:0001016,5.50e-10,75;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002037,3.67e-09,4;UBERON:0002680,3.67e-09,4;UBERON:0001895,3.67e-09,4;UBERON:0010092,3.67e-09,4;UBERON:0006215,3.67e-09,4;UBERON:0002950,9.16e-09,4;UBERON:0001891,9.16e-09,4;UBERON:0009616,9.16e-09,4;UBERON:0010286,9.16e-09,4;UBERON:0000073,8.46e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,1.09843091367236,0.58328969722285,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,2.69640099466564,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.46390398505774,5.86450779077674,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0.767146371990992,1.24672826735736,0.648965052271031,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0.258319646955462,0.168956125490778,0.704143431874524,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.436050312760893,1.09843091367236,0.58328969722285,0.419959264876088,2.87505128729943,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,2.69640099466564,3.45796474789399,0,0,0,0.285650984403804,0.662605622854841,0,0,0,1.10115880999389,0.510749352340751,0.46081959976873,0,0.0914876436024097,0,1.11673199600552,1.12552522006336,0.30559649555362,0.589257170947335,0.284743361598206,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,1.46390398505774,5.86450779077674,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0.767146371990992,1.24672826735736,0.648965052271031,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,1.81092359517311,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.703270119553219,0,0.504941854408746,0,0,0,0,0.222798674082394,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0,0.194451188344048,0.258319646955462,0.168956125490778,0.704143431874524,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0.45032120322422,0,0.51776031175182,0,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0.25347929989024,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p@chr11:69414336..69414343,- | |short_description=p@chr11:69414336..69414343,- | ||
}} | }} |
Latest revision as of 10:17, 6 August 2015
Short description: | p@chr11:69414336..69414343, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69414336..69414343, - |
Coexpression cluster: | MCL_coexpression_mm9:791 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.87e-17 | 2 |
microglial cell | 1.87e-17 | 2 |
oligodendrocyte precursor cell | 1.67e-16 | 8 |
migratory neural crest cell | 2.82e-13 | 10 |
neuron associated cell | 2.82e-13 | 10 |
glial cell (sensu Vertebrata) | 2.82e-13 | 10 |
neuron associated cell (sensu Vertebrata) | 2.82e-13 | 10 |
glial cell | 2.82e-13 | 10 |
glioblast | 2.82e-13 | 10 |
glioblast (sensu Vertebrata) | 2.82e-13 | 10 |
neuron of the substantia nigra | 2.23e-11 | 3 |
monopoietic cell | 3.35e-09 | 4 |
myeloid leukocyte | 3.35e-09 | 4 |
phagocyte | 3.35e-09 | 4 |
monocyte | 3.35e-09 | 4 |
macrophage | 3.35e-09 | 4 |
tissue-resident macrophage | 3.35e-09 | 4 |
macrophage dendritic cell progenitor | 3.35e-09 | 4 |
monoblast | 3.35e-09 | 4 |
promonocyte | 3.35e-09 | 4 |
neural cell | 1.03e-08 | 43 |
ectodermal cell | 1.66e-08 | 44 |
neurectodermal cell | 1.66e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 2.23e-11 | 3 |
telencephalic nucleus | 2.23e-11 | 3 |
midbrain nucleus | 2.23e-11 | 3 |
neural nucleus | 2.23e-11 | 3 |
nucleus of brain | 2.23e-11 | 3 |
central nervous system | 2.79e-10 | 73 |
nervous system | 5.50e-10 | 75 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
cerebellum | 3.67e-09 | 4 |
regional part of metencephalon | 3.67e-09 | 4 |
metencephalon | 3.67e-09 | 4 |
future metencephalon | 3.67e-09 | 4 |
rhombic lip | 3.67e-09 | 4 |
regional part of midbrain | 9.16e-09 | 4 |
midbrain | 9.16e-09 | 4 |
presumptive midbrain | 9.16e-09 | 4 |
midbrain neural tube | 9.16e-09 | 4 |
regional part of nervous system | 8.46e-07 | 54 |