FFCP PHASE1:Hg19::chr4:140587108..140587121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4258 | |EntrezGene=4258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7063 | |HGNC=7063 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=21bp_to_ENST00000515137_5end | |association_with_transcript=21bp_to_ENST00000515137_5end | ||
|cluster_id=chr4:140587108..140587121,+ | |||
|coexpression_cluster_id=C4373 | |coexpression_cluster_id=C4373 | ||
|description=CAGE_peak_5_at_MGST2_5end | |description=CAGE_peak_5_at_MGST2_5end | ||
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|ontology_enrichment_celltype=CL:0002139!2.99e-17!24;CL:0000115!3.44e-16!35;CL:0000071!6.35e-13!18;CL:0002546!6.35e-13!18;CL:0002078!6.30e-12!44;CL:0000066!1.98e-08!254;CL:1000413!5.74e-07!9 | |ontology_enrichment_celltype=CL:0002139!2.99e-17!24;CL:0000115!3.44e-16!35;CL:0000071!6.35e-13!18;CL:0002546!6.35e-13!18;CL:0002078!6.30e-12!44;CL:0000066!1.98e-08!254;CL:1000413!5.74e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;2.87e-30;24!CL:0000115;9.18e-26;36!CL:0000071;3.08e-22;18!CL:0002078;4.23e-15;45!CL:1000413;1.85e-11;9!CL:0000213;1.22e-09;58!CL:0000215;1.22e-09;58!CL:0002138;1.34e-09;6!CL:0002543;6.09e-09;6!CL:0002544;2.57e-08;6!CL:0000182;3.68e-07;12 | |ontology_enrichment_celltype_v019=CL:0002139;2.87e-30;24!CL:0000115;9.18e-26;36!CL:0000071;3.08e-22;18!CL:0002078;4.23e-15;45!CL:1000413;1.85e-11;9!CL:0000213;1.22e-09;58!CL:0000215;1.22e-09;58!CL:0002138;1.34e-09;6!CL:0002543;6.09e-09;6!CL:0002544;2.57e-08;6!CL:0000182;3.68e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.83e-31,36;CL:0002139,1.54e-30,24;CL:0000071,1.59e-22,18;CL:0002546,1.59e-22,18;CL:0002078,2.11e-22,45;CL:0000213,5.32e-15,58;CL:0000215,5.32e-15,58;CL:1000413,1.52e-11,9;CL:0000066,5.83e-10,253;CL:0005020,1.42e-09,6;CL:0002138,1.42e-09,6;CL:0005022,1.42e-09,6;CL:0002543,5.14e-09,6;CL:0002544,2.78e-08,6;CL:0000182,4.38e-07,12 | |||
|ontology_enrichment_development_v019=CL:0002546;3.08e-22;18!CL:0005022;1.34e-09;6 | |ontology_enrichment_development_v019=CL:0002546;3.08e-22;18!CL:0005022;1.34e-09;6 | ||
|ontology_enrichment_disease=DOID:8692!3.71e-07!31 | |ontology_enrichment_disease=DOID:8692!3.71e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:1036;6.44e-07;8 | |ontology_enrichment_disease_v019=DOID:1036;6.44e-07;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,6.68e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.77e-17!115;UBERON:0001986!6.35e-13!18;UBERON:0004638!6.35e-13!18;UBERON:0004852!6.35e-13!18;UBERON:0000477!4.91e-10!286;UBERON:0004111!5.40e-10!241;UBERON:0000487!1.57e-09!22;UBERON:0004921!9.75e-09!129;UBERON:0004185!9.75e-09!129;UBERON:0006914!1.41e-08!25;UBERON:0004119!2.66e-07!169;UBERON:0000925!2.66e-07!169;UBERON:0006595!2.66e-07!169;UBERON:0001007!4.65e-07!155;UBERON:0001555!4.65e-07!155;UBERON:0007026!4.65e-07!155;UBERON:0003915!5.74e-07!9;UBERON:0004700!5.74e-07!9;UBERON:0001917!5.74e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.77e-17!115;UBERON:0001986!6.35e-13!18;UBERON:0004638!6.35e-13!18;UBERON:0004852!6.35e-13!18;UBERON:0000477!4.91e-10!286;UBERON:0004111!5.40e-10!241;UBERON:0000487!1.57e-09!22;UBERON:0004921!9.75e-09!129;UBERON:0004185!9.75e-09!129;UBERON:0006914!1.41e-08!25;UBERON:0004119!2.66e-07!169;UBERON:0000925!2.66e-07!169;UBERON:0006595!2.66e-07!169;UBERON:0001007!4.65e-07!155;UBERON:0001555!4.65e-07!155;UBERON:0007026!4.65e-07!155;UBERON:0003915!5.74e-07!9;UBERON:0004700!5.74e-07!9;UBERON:0001917!5.74e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.08e-22;18!UBERON:0001986;3.08e-22;18!UBERON:0004852;3.08e-22;18!UBERON:0000487;4.69e-17;22!UBERON:0006914;2.77e-14;25!UBERON:0003915;1.85e-11;9!UBERON:0004700;1.85e-11;9!UBERON:0001917;1.85e-11;9!UBERON:0000490;5.08e-11;33!UBERON:0002465;1.09e-08;10!UBERON:0001638;2.35e-07;9!UBERON:0003920;2.35e-07;9!UBERON:0004582;2.35e-07;9!UBERON:0004921;3.98e-07;33!UBERON:0000160;4.65e-07;17!UBERON:0002423;5.86e-07;25!UBERON:0001473;7.28e-07;8!UBERON:0004536;7.28e-07;8!UBERON:0006558;7.28e-07;8 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.08e-22;18!UBERON:0001986;3.08e-22;18!UBERON:0004852;3.08e-22;18!UBERON:0000487;4.69e-17;22!UBERON:0006914;2.77e-14;25!UBERON:0003915;1.85e-11;9!UBERON:0004700;1.85e-11;9!UBERON:0001917;1.85e-11;9!UBERON:0000490;5.08e-11;33!UBERON:0002465;1.09e-08;10!UBERON:0001638;2.35e-07;9!UBERON:0003920;2.35e-07;9!UBERON:0004582;2.35e-07;9!UBERON:0004921;3.98e-07;33!UBERON:0000160;4.65e-07;17!UBERON:0002423;5.86e-07;25!UBERON:0001473;7.28e-07;8!UBERON:0004536;7.28e-07;8!UBERON:0006558;7.28e-07;8 | ||
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| ||
|short_description=p5@MGST2 | |short_description=p5@MGST2 | ||
}} | }} |
Latest revision as of 17:36, 15 September 2015
Short description: | p5@MGST2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MGST2_5end |
Coexpression cluster: | C4373_Hepatocyte_small_hepatocellular_Endothelial_liver_Renal_duodenum |
Association with transcript: | 21bp_to_ENST00000515137_5end |
EntrezGene: | MGST2 |
HGNC: | 7063 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.83e-31 | 36 |
endothelial cell of vascular tree | 1.54e-30 | 24 |
blood vessel endothelial cell | 1.59e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.59e-22 | 18 |
meso-epithelial cell | 2.11e-22 | 45 |
lining cell | 5.32e-15 | 58 |
barrier cell | 5.32e-15 | 58 |
endothelial cell of artery | 1.52e-11 | 9 |
epithelial cell | 5.83e-10 | 253 |
lymphangioblast | 1.42e-09 | 6 |
endothelial cell of lymphatic vessel | 1.42e-09 | 6 |
vascular lymphangioblast | 1.42e-09 | 6 |
vein endothelial cell | 5.14e-09 | 6 |
aortic endothelial cell | 2.78e-08 | 6 |
hepatocyte | 4.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.68e-07 | 8 |