FFCP PHASE1:Hg19::chr6:143095902..143095910,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3097 | |EntrezGene=3097 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4921 | |HGNC=4921 | ||
|TSSclassifier=strong | |||
|UniProt=Q38G99 | |UniProt=Q38G99 | ||
|association_with_transcript=-27bp_to_BC167801,DQ231041_5end | |association_with_transcript=-27bp_to_BC167801,DQ231041_5end | ||
|cluster_id=chr6:143095902..143095910,- | |||
|coexpression_cluster_id=C107 | |coexpression_cluster_id=C107 | ||
|description=CAGE_peak_3_at_HIVEP2_5end | |description=CAGE_peak_3_at_HIVEP2_5end | ||
|id=chr6:143095902..143095910,- | |id=chr6:143095902..143095910,- | ||
|ontology_enrichment_celltype=CL:0002057!1.78e-14!42;CL:0000860!1.04e-12!45;CL:0002009!4.67e-07!65;CL:0002194!5.16e-07!63;CL:0000576!5.16e-07!63;CL:0000040!5.16e-07!63;CL:0000559!5.16e-07!63 | |ontology_enrichment_celltype=CL:0002057!1.78e-14!42;CL:0000860!1.04e-12!45;CL:0002009!4.67e-07!65;CL:0002194!5.16e-07!63;CL:0000576!5.16e-07!63;CL:0000040!5.16e-07!63;CL:0000559!5.16e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.13e-46;33!CL:0002057;1.13e-46;33!CL:0000473;7.40e-34;39!CL:0000234;7.40e-34;39!CL:0000576;2.40e-19;48!CL:0000766;3.25e-14;69!CL:0000763;3.25e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.31e-39,42;CL:0002057,7.31e-39,42;CL:0000473,1.46e-33,48;CL:0000234,1.46e-33,48;CL:0000766,1.51e-26,72;CL:0002194,3.87e-26,59;CL:0000576,3.87e-26,59;CL:0000040,3.87e-26,59;CL:0000559,3.87e-26,59;CL:0002009,3.51e-25,61;CL:0000839,4.90e-23,66;CL:0000557,1.21e-22,67;CL:0000763,1.83e-16,108;CL:0000049,1.83e-16,108;CL:0000738,1.72e-15,136;CL:0002087,2.09e-13,115;CL:0002031,1.07e-12,120;CL:0000037,9.85e-12,168;CL:0002032,4.89e-11,161;CL:0000837,4.89e-11,161;CL:0000988,6.39e-11,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-27;42!UBERON:0010227;2.42e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.80e-08!22;UBERON:0001893!3.12e-08!34;UBERON:0001950!3.15e-08!20;UBERON:0002791!5.57e-08!33;UBERON:0001869!1.60e-07!32;UBERON:0002780!3.12e-07!41;UBERON:0001890!3.12e-07!41;UBERON:0006240!3.12e-07!41;UBERON:0001049!4.43e-07!57;UBERON:0005068!4.43e-07!57;UBERON:0006241!4.43e-07!57;UBERON:0007135!4.43e-07!57;UBERON:0002020!5.66e-07!34;UBERON:0003528!5.66e-07!34;UBERON:0003080!7.01e-07!42;UBERON:0001017!7.48e-07!82 | |ontology_enrichment_uberon=UBERON:0002619!2.80e-08!22;UBERON:0001893!3.12e-08!34;UBERON:0001950!3.15e-08!20;UBERON:0002791!5.57e-08!33;UBERON:0001869!1.60e-07!32;UBERON:0002780!3.12e-07!41;UBERON:0001890!3.12e-07!41;UBERON:0006240!3.12e-07!41;UBERON:0001049!4.43e-07!57;UBERON:0005068!4.43e-07!57;UBERON:0006241!4.43e-07!57;UBERON:0007135!4.43e-07!57;UBERON:0002020!5.66e-07!34;UBERON:0003528!5.66e-07!34;UBERON:0003080!7.01e-07!42;UBERON:0001017!7.48e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0002079;2.42e-07;1!UBERON:0001950;4.69e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.39e-19,76;UBERON:0001474,6.56e-18,82;UBERON:0004765,5.05e-16,90;UBERON:0002405,2.13e-15,93;UBERON:0002390,1.92e-14,98;UBERON:0003061,1.92e-14,98;UBERON:0001434,4.36e-14,100;UBERON:0002193,8.56e-13,108;UBERON:0002079,2.07e-07,1;UBERON:0002204,4.33e-07,167;UBERON:0003081,6.20e-07,203;UBERON:0001950,6.55e-07,20 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0.581592955118259,0,0.242584061187816,1.62700325833979,2.46700732813095,1.23882548358041,0.863077176966451,0.768482119587302,0.236482229888585,1.03423704220986,1.29096936716765,1.35426486594342,0.564727018627814,0.818718450173537,0,1.22433556948361,0.962787081228281,1.91801137739712,0.659702600373432,1.79517291859469,1.70489900213078,6.96502172708602,2.26954089876456,5.60540024096017,1.50749199154046,0,0.434377689410233,5.44859552370032,1.84138817993782,2.84816148696796,0,0,0.209658645508376,0.22465726229299,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,1.23360899399706,0,0.32592226663359,0,1.94826728407911,0.222820913770347,0.294605907474837,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0.255973222308837,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0.132409180813219,0,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0.635795703478686,0,0.412210116953756,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0.435758888184812,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0,0,5.9832291840805,0,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0,0,0,0.120859449591622,0.40101294060657,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0.876901770507525,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0.280797178113459,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,1.22864280839693,0,0.703347082052564,0,0.16480387422676,0,0,0,0,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0.969332746095218,0.371072392647405,0,0,0,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.583209226766509,0,0,0.361789315876224,0,0.774054819518572,0.886642856860642,0.219385397153973,0,0.278847488557207,0,0,0,0,0,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0.210998064528027,0.326465616318295,0,0.216388639742091,0,0,0,0.593042257361244,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0.364909578431332,0,0,0,0,1.22429104652196,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0.0882561266915003,0,0,0,0.0633107959558787,0,0,0,0.999048047910651,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0.859530882839914,0,0,0,0,0,0.429226048136571,0,0,0.720599767084807,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0,0.160753148465019,0.137539436597234,0.415440338029185,0.2249738915515,0,0.242998226632099,0,0,0,0,0,0,1.42939065274673,0,0,0,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0.886068179966986,2.92863035764712,0.3755727921195,0,0.332787154610557,0.0620964029413835,0,0.124980407962107,0.151649117541648,0.285465333544967,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0.151230923763239,0.15543720058278,0.147855149989634,0.477890301491107,0.449803112163605,0,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0.464033759878494,1.59238355479446,1.20008329398946,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0.352675943690684,0,0.0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| ||
|short_description=p3@HIVEP2 | |short_description=p3@HIVEP2 | ||
}} | }} |
Latest revision as of 17:52, 15 September 2015
Short description: | p3@HIVEP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HIVEP2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -27bp_to_BC167801, DQ231041_5end |
EntrezGene: | HIVEP2 |
HGNC: | 4921 |
UniProt: | Q38G99 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.31e-39 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.31e-39 | 42 |
defensive cell | 1.46e-33 | 48 |
phagocyte | 1.46e-33 | 48 |
myeloid leukocyte | 1.51e-26 | 72 |
monopoietic cell | 3.87e-26 | 59 |
monocyte | 3.87e-26 | 59 |
monoblast | 3.87e-26 | 59 |
promonocyte | 3.87e-26 | 59 |
macrophage dendritic cell progenitor | 3.51e-25 | 61 |
myeloid lineage restricted progenitor cell | 4.90e-23 | 66 |
granulocyte monocyte progenitor cell | 1.21e-22 | 67 |
myeloid cell | 1.83e-16 | 108 |
common myeloid progenitor | 1.83e-16 | 108 |
leukocyte | 1.72e-15 | 136 |
nongranular leukocyte | 2.09e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.07e-12 | 120 |
hematopoietic stem cell | 9.85e-12 | 168 |
hematopoietic oligopotent progenitor cell | 4.89e-11 | 161 |
hematopoietic multipotent progenitor cell | 4.89e-11 | 161 |
hematopoietic cell | 6.39e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.39e-19 | 76 |
bone element | 6.56e-18 | 82 |
skeletal element | 5.05e-16 | 90 |
immune system | 2.13e-15 | 93 |
hematopoietic system | 1.92e-14 | 98 |
blood island | 1.92e-14 | 98 |
skeletal system | 4.36e-14 | 100 |
hemolymphoid system | 8.56e-13 | 108 |
left cardiac atrium | 2.07e-07 | 1 |
musculoskeletal system | 4.33e-07 | 167 |
lateral plate mesoderm | 6.20e-07 | 203 |
neocortex | 6.55e-07 | 20 |