FFCP PHASE1:Hg19::chr20:33462854..33462864,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55902 | |EntrezGene=55902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |HGNC=15814 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=34bp_to_ENST00000461051_5end | |association_with_transcript=34bp_to_ENST00000461051_5end | ||
|cluster_id=chr20:33462854..33462864,+ | |||
|coexpression_cluster_id=C166 | |coexpression_cluster_id=C166 | ||
|description=CAGE_peak_10_at_ACSS2_5end | |description=CAGE_peak_10_at_ACSS2_5end | ||
|id=chr20:33462854..33462864,+ | |id=chr20:33462854..33462864,+ | ||
|ontology_enrichment_celltype=CL:0000235!6.96e-17!10;CL:0000840!7.28e-11!5;CL:0001029!7.28e-11!5;CL:0000990!2.19e-07!8;CL:0002194!4.10e-07!63;CL:0000576!4.10e-07!63;CL:0000040!4.10e-07!63;CL:0000559!4.10e-07!63;CL:0002009!7.45e-07!65 | |ontology_enrichment_celltype=CL:0000235!6.96e-17!10;CL:0000840!7.28e-11!5;CL:0001029!7.28e-11!5;CL:0000990!2.19e-07!8;CL:0002194!4.10e-07!63;CL:0000576!4.10e-07!63;CL:0000040!4.10e-07!63;CL:0000559!4.10e-07!63;CL:0002009!7.45e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000235;4.93e-91;6!CL:0000840;1.17e-33;5!CL:0000990;1.01e-22;8!CL:0000451;9.78e-19;10!CL:0000473;2.54e-12;39!CL:0000234;2.54e-12;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,6.52e-91,6;CL:0000840,9.39e-34,5;CL:0001029,9.39e-34,5;CL:0002194,2.69e-23,59;CL:0000576,2.69e-23,59;CL:0000040,2.69e-23,59;CL:0000559,2.69e-23,59;CL:0000990,8.69e-23,8;CL:0002009,1.52e-22,61;CL:0000839,7.42e-21,66;CL:0000557,1.51e-20,67;CL:0000766,3.91e-19,72;CL:0000451,8.66e-19,10;CL:0000763,9.19e-13,108;CL:0000049,9.19e-13,108;CL:0002087,5.58e-12,115;CL:0000473,1.17e-11,48;CL:0000234,1.17e-11,48;CL:0002031,1.78e-11,120;CL:0000738,4.17e-10,136;CL:0002032,1.68e-08,161;CL:0000837,1.68e-08,161;CL:0000037,3.90e-08,168;CL:0000988,1.05e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!8.53e-10!55;UBERON:0005173!8.53e-10!55;UBERON:0002417!1.14e-08!61;UBERON:0000916!1.14e-08!61;UBERON:0002171!5.70e-08!1;UBERON:0006518!5.70e-08!1;UBERON:0008949!5.70e-08!1;UBERON:0000101!5.70e-08!1;UBERON:0002167!5.70e-08!1;UBERON:0001301!9.10e-08!1;UBERON:0002405!3.93e-07!115 | |ontology_enrichment_uberon=UBERON:0005172!8.53e-10!55;UBERON:0005173!8.53e-10!55;UBERON:0002417!1.14e-08!61;UBERON:0000916!1.14e-08!61;UBERON:0002171!5.70e-08!1;UBERON:0006518!5.70e-08!1;UBERON:0008949!5.70e-08!1;UBERON:0000101!5.70e-08!1;UBERON:0002167!5.70e-08!1;UBERON:0001301!9.10e-08!1;UBERON:0002405!3.93e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.90e-18,76;UBERON:0001474,8.16e-17,82;UBERON:0004765,2.53e-15,90;UBERON:0002405,7.88e-15,93;UBERON:0002390,4.51e-14,98;UBERON:0003061,4.51e-14,98;UBERON:0001434,8.64e-14,100;UBERON:0002193,9.19e-13,108;UBERON:0002204,3.47e-08,167 | |||
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|short_description=p10@ACSS2 | |short_description=p10@ACSS2 | ||
}} | }} |
Latest revision as of 18:27, 15 September 2015
Short description: | p10@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ACSS2_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | 34bp_to_ENST00000461051_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 6.52e-91 | 6 |
immature conventional dendritic cell | 9.39e-34 | 5 |
common dendritic progenitor | 9.39e-34 | 5 |
monopoietic cell | 2.69e-23 | 59 |
monocyte | 2.69e-23 | 59 |
monoblast | 2.69e-23 | 59 |
promonocyte | 2.69e-23 | 59 |
conventional dendritic cell | 8.69e-23 | 8 |
macrophage dendritic cell progenitor | 1.52e-22 | 61 |
myeloid lineage restricted progenitor cell | 7.42e-21 | 66 |
granulocyte monocyte progenitor cell | 1.51e-20 | 67 |
myeloid leukocyte | 3.91e-19 | 72 |
dendritic cell | 8.66e-19 | 10 |
myeloid cell | 9.19e-13 | 108 |
common myeloid progenitor | 9.19e-13 | 108 |
nongranular leukocyte | 5.58e-12 | 115 |
defensive cell | 1.17e-11 | 48 |
phagocyte | 1.17e-11 | 48 |
hematopoietic lineage restricted progenitor cell | 1.78e-11 | 120 |
leukocyte | 4.17e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-08 | 161 |
hematopoietic stem cell | 3.90e-08 | 168 |
hematopoietic cell | 1.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.90e-18 | 76 |
bone element | 8.16e-17 | 82 |
skeletal element | 2.53e-15 | 90 |
immune system | 7.88e-15 | 93 |
hematopoietic system | 4.51e-14 | 98 |
blood island | 4.51e-14 | 98 |
skeletal system | 8.64e-14 | 100 |
hemolymphoid system | 9.19e-13 | 108 |
musculoskeletal system | 3.47e-08 | 167 |