FFCP PHASE1:Hg19::chr10:101542415..101542428,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1244 | |EntrezGene=1244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=53 | |HGNC=53 | ||
|TSSclassifier=strong | |||
|UniProt=Q92887 | |UniProt=Q92887 | ||
|association_with_transcript=-34bp_to_NM_000392,uc001kqf.2_5end | |association_with_transcript=-34bp_to_NM_000392,uc001kqf.2_5end | ||
|cluster_id=chr10:101542415..101542428,+ | |||
|coexpression_cluster_id=C2031 | |coexpression_cluster_id=C2031 | ||
|description=CAGE_peak_4_at_ABCC2_5end | |description=CAGE_peak_4_at_ABCC2_5end | ||
|id=chr10:101542415..101542428,+ | |id=chr10:101542415..101542428,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.32e-12!254;CL:0000181!5.31e-10!12;CL:0000417!5.31e-10!12;CL:0000668!5.31e-10!12;CL:0000414!5.31e-10!12;CL:0000412!5.31e-10!12;CL:0000182!5.31e-10!12;CL:0000148!4.70e-09!10;CL:0000541!4.70e-09!10;CL:0000083!2.76e-08!4;CL:0002150!1.06e-07!3;CL:0000861!1.06e-07!3 | |ontology_enrichment_celltype=CL:0000066!3.32e-12!254;CL:0000181!5.31e-10!12;CL:0000417!5.31e-10!12;CL:0000668!5.31e-10!12;CL:0000414!5.31e-10!12;CL:0000412!5.31e-10!12;CL:0000182!5.31e-10!12;CL:0000148!4.70e-09!10;CL:0000541!4.70e-09!10;CL:0000083!2.76e-08!4;CL:0002150!1.06e-07!3;CL:0000861!1.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.04e-11;12!CL:0000148;1.39e-09;10!CL:0000083;3.48e-09;4!CL:0000147;9.34e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.45e-18,253;CL:0000182,2.13e-11,12;CL:0000148,1.75e-09,10;CL:0000541,1.75e-09,10;CL:0000083,2.89e-09,4;CL:0000223,4.07e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.07e-21;29!UBERON:0001041;2.33e-11;30!UBERON:0009497;3.60e-10;13!UBERON:0004161;2.14e-08;11 | |||
|ontology_enrichment_disease=DOID:305!1.87e-20!106;DOID:0050687!9.41e-19!143;DOID:162!5.79e-11!235;DOID:14566!1.92e-10!239;DOID:1793!2.76e-08!4 | |ontology_enrichment_disease=DOID:305!1.87e-20!106;DOID:0050687!9.41e-19!143;DOID:162!5.79e-11!235;DOID:14566!1.92e-10!239;DOID:1793!2.76e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:1793;3.48e-09;4!DOID:305;1.29e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.91e-28,106;DOID:0050687,7.93e-24,143;DOID:162,2.38e-14,235;DOID:14566,7.08e-14,239;DOID:1793,2.89e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.78e-18!9;UBERON:0004921!3.60e-14!129;UBERON:0004185!3.60e-14!129;UBERON:0001041!3.15e-13!98;UBERON:0000077!3.51e-13!130;UBERON:0001007!2.43e-11!155;UBERON:0001555!2.43e-11!155;UBERON:0007026!2.43e-11!155;UBERON:0004119!4.12e-10!169;UBERON:0000925!4.12e-10!169;UBERON:0006595!4.12e-10!169;UBERON:0001557!3.31e-09!19;UBERON:0009497!6.14e-09!25;UBERON:0000015!6.14e-09!25;UBERON:0002423!6.14e-09!25;UBERON:0006235!6.14e-09!25;UBERON:0004161!6.14e-09!25;UBERON:0008947!8.70e-09!38;UBERON:0003258!8.70e-09!38;UBERON:0008835!1.49e-07!22;UBERON:0003894!1.49e-07!22;UBERON:0000072!1.54e-07!46;UBERON:0003104!1.61e-07!238;UBERON:0009142!1.61e-07!238;UBERON:0002107!3.19e-07!19;UBERON:0006925!3.19e-07!19;UBERON:0008836!3.19e-07!19;UBERON:0009854!3.99e-07!23 | |ontology_enrichment_uberon=UBERON:0001737!1.78e-18!9;UBERON:0004921!3.60e-14!129;UBERON:0004185!3.60e-14!129;UBERON:0001041!3.15e-13!98;UBERON:0000077!3.51e-13!130;UBERON:0001007!2.43e-11!155;UBERON:0001555!2.43e-11!155;UBERON:0007026!2.43e-11!155;UBERON:0004119!4.12e-10!169;UBERON:0000925!4.12e-10!169;UBERON:0006595!4.12e-10!169;UBERON:0001557!3.31e-09!19;UBERON:0009497!6.14e-09!25;UBERON:0000015!6.14e-09!25;UBERON:0002423!6.14e-09!25;UBERON:0006235!6.14e-09!25;UBERON:0004161!6.14e-09!25;UBERON:0008947!8.70e-09!38;UBERON:0003258!8.70e-09!38;UBERON:0008835!1.49e-07!22;UBERON:0003894!1.49e-07!22;UBERON:0000072!1.54e-07!46;UBERON:0003104!1.61e-07!238;UBERON:0009142!1.61e-07!238;UBERON:0002107!3.19e-07!19;UBERON:0006925!3.19e-07!19;UBERON:0008836!3.19e-07!19;UBERON:0009854!3.99e-07!23 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.19e-34;9!UBERON:0001557;1.19e-34;9!UBERON:0000072;8.64e-14;37!UBERON:0000065;7.96e-11;44!UBERON:0002107;4.06e-09;19!UBERON:0006925;4.06e-09;19!UBERON:0002423;7.92e-09;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.15e-34,9;UBERON:0001557,1.58e-15,19;UBERON:0001041,3.64e-15,87;UBERON:0008947,3.95e-15,38;UBERON:0003258,3.95e-15,38;UBERON:0004921,2.40e-13,118;UBERON:0000072,1.14e-11,47;UBERON:0008835,2.60e-10,22;UBERON:0003894,2.60e-10,22;UBERON:0001007,7.85e-10,145;UBERON:0001555,7.85e-10,145;UBERON:0007026,7.85e-10,145;UBERON:0009854,8.33e-10,23;UBERON:0000065,8.71e-10,54;UBERON:0002107,3.20e-09,19;UBERON:0006925,3.20e-09,19;UBERON:0008836,3.20e-09,19;UBERON:0007499,6.47e-09,25;UBERON:0009497,6.47e-09,25;UBERON:0000015,6.47e-09,25;UBERON:0002423,6.47e-09,25;UBERON:0006235,6.47e-09,25;UBERON:0004161,6.47e-09,25;UBERON:0009856,1.60e-08,26;UBERON:0001048,1.93e-08,160;UBERON:0004119,2.09e-08,160;UBERON:0000925,2.09e-08,160;UBERON:0006595,2.09e-08,160;UBERON:0001004,1.41e-07,74;UBERON:0005911,1.82e-07,82;UBERON:0000949,9.18e-07,45 | |||
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| ||
|short_description=p4@ABCC2 | |short_description=p4@ABCC2 | ||
}} | }} |
Latest revision as of 19:17, 15 September 2015
Short description: | p4@ABCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ABCC2_5end |
Coexpression cluster: | C2031_bile_lung_large_epitheloid_mesothelioma_hepatoma_maxillary |
Association with transcript: | -34bp_to_NM_000392, uc001kqf.2_5end |
EntrezGene: | ABCC2 |
HGNC: | 53 |
UniProt: | Q92887 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.45e-18 | 253 |
hepatocyte | 2.13e-11 | 12 |
melanocyte | 1.75e-09 | 10 |
melanoblast | 1.75e-09 | 10 |
epithelial cell of pancreas | 2.89e-09 | 4 |
endodermal cell | 4.07e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.15e-34 | 9 |
upper respiratory tract | 1.58e-15 | 19 |
foregut | 3.64e-15 | 87 |
respiratory primordium | 3.95e-15 | 38 |
endoderm of foregut | 3.95e-15 | 38 |
subdivision of digestive tract | 2.40e-13 | 118 |
segment of respiratory tract | 1.14e-11 | 47 |
hepatic diverticulum | 2.60e-10 | 22 |
liver primordium | 2.60e-10 | 22 |
digestive system | 7.85e-10 | 145 |
digestive tract | 7.85e-10 | 145 |
primitive gut | 7.85e-10 | 145 |
digestive tract diverticulum | 8.33e-10 | 23 |
respiratory tract | 8.71e-10 | 54 |
liver | 3.20e-09 | 19 |
digestive gland | 3.20e-09 | 19 |
liver bud | 3.20e-09 | 19 |
epithelial sac | 6.47e-09 | 25 |
epithelium of foregut-midgut junction | 6.47e-09 | 25 |
anatomical boundary | 6.47e-09 | 25 |
hepatobiliary system | 6.47e-09 | 25 |
foregut-midgut junction | 6.47e-09 | 25 |
septum transversum | 6.47e-09 | 25 |
sac | 1.60e-08 | 26 |
primordium | 1.93e-08 | 160 |
endoderm-derived structure | 2.09e-08 | 160 |
endoderm | 2.09e-08 | 160 |
presumptive endoderm | 2.09e-08 | 160 |
respiratory system | 1.41e-07 | 74 |
endo-epithelium | 1.82e-07 | 82 |
endocrine system | 9.18e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.91e-28 | 106 |
cell type cancer | 7.93e-24 | 143 |
cancer | 2.38e-14 | 235 |
disease of cellular proliferation | 7.08e-14 | 239 |
pancreatic cancer | 2.89e-09 | 4 |