FFCP PHASE1:Hg19::chrX:48456220..48456242,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:48456220..48456242,+ to FFCP PHASE1:Hg19::chrX:48456220..48456242,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64743 | |EntrezGene=64743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14352 | |HGNC=14352 | ||
|TSSclassifier=strong | |||
|UniProt=Q06DX0,Q9H1Z4 | |UniProt=Q06DX0,Q9H1Z4 | ||
|association_with_transcript=0bp_to_NM_001166426_5end | |||
|cluster_id=chrX:48456220..48456242,+ | |||
|description=CAGE_peak_4_at_WDR13_5end | |||
|id=chrX:48456220..48456242,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.34e-20!42;CL:0000766!1.75e-20!76;CL:0000860!2.82e-20!45;CL:0000557!1.43e-18!71;CL:0000839!4.44e-17!70;CL:0002009!3.30e-16!65;CL:0002194!1.45e-15!63;CL:0000576!1.45e-15!63;CL:0000040!1.45e-15!63;CL:0000559!1.45e-15!63;CL:0000115!4.79e-11!35;CL:0002139!7.03e-10!24;CL:0000213!8.04e-10!57;CL:0000215!8.04e-10!57;CL:0000738!8.22e-10!140;CL:0002371!9.37e-10!591;CL:0002031!1.27e-09!124;CL:0000063!2.73e-09!578;CL:0000763!6.49e-09!112;CL:0000049!6.49e-09!112;CL:0002078!9.89e-09!44;CL:0000071!1.03e-08!18;CL:0002546!1.03e-08!18;CL:0002087!3.33e-08!119;CL:0000222!8.09e-08!119;CL:0000144!5.22e-07!625;CL:0000003!6.41e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.55e-16;33!CL:0002057;3.55e-16;33!CL:0000473;3.76e-13;39!CL:0000234;3.76e-13;39!CL:0000576;3.86e-13;48!CL:0000766;3.24e-12;69!CL:0000115;3.76e-11;36!CL:0002139;7.95e-11;24!CL:0000071;2.38e-09;18!CL:0002078;1.02e-07;45!CL:0000213;6.03e-07;58!CL:0000215;6.03e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.64e-23,72;CL:0000860,1.28e-22,42;CL:0002057,1.28e-22,42;CL:0000473,4.84e-22,48;CL:0000234,4.84e-22,48;CL:0000557,7.79e-21,67;CL:0000839,6.45e-19,66;CL:0002009,3.45e-18,61;CL:0002194,1.80e-17,59;CL:0000576,1.80e-17,59;CL:0000040,1.80e-17,59;CL:0000559,1.80e-17,59;CL:0000115,6.37e-13,36;CL:0000738,2.10e-12,136;CL:0000763,1.41e-11,108;CL:0000049,1.41e-11,108;CL:0000213,4.29e-11,58;CL:0000215,4.29e-11,58;CL:0002031,4.51e-11,120;CL:0002139,9.25e-11,24;CL:0002078,2.33e-10,45;CL:0002087,9.94e-10,115;CL:0000071,1.79e-09,18;CL:0002546,1.79e-09,18;CL:0000222,3.13e-08,121;CL:0002032,1.74e-07,161;CL:0000837,1.74e-07,161;CL:0000037,1.89e-07,168;CL:0002393,6.86e-07,9;CL:0002397,6.86e-07,9;CL:0000988,8.14e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;5.42e-17;42!CL:0002546;2.38e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.81e-24!216;UBERON:0002371!2.46e-15!80;UBERON:0002193!7.64e-15!112;UBERON:0002390!7.70e-14!102;UBERON:0003061!7.70e-14!102;UBERON:0002405!2.11e-12!115;UBERON:0001474!2.67e-12!86;UBERON:0004765!6.58e-11!101;UBERON:0001434!6.58e-11!101;UBERON:0004872!7.47e-11!84;UBERON:0004535!3.74e-10!110;UBERON:0001009!5.00e-10!113;UBERON:0002204!9.84e-10!167;UBERON:0000055!1.12e-09!69;UBERON:0001981!2.24e-09!60;UBERON:0007500!2.24e-09!60;UBERON:0004537!2.24e-09!60;UBERON:0006965!2.24e-09!60;UBERON:0000926!3.56e-09!448;UBERON:0004120!3.56e-09!448;UBERON:0006603!3.56e-09!448;UBERON:0001986!1.03e-08!18;UBERON:0004638!1.03e-08!18;UBERON:0004852!1.03e-08!18;UBERON:0002049!1.25e-08!79;UBERON:0007798!1.25e-08!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.38e-09;18!UBERON:0001986;2.38e-09;18!UBERON:0004852;2.38e-09;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.45e-27,203;UBERON:0002371,3.03e-17,76;UBERON:0002405,3.26e-16,93;UBERON:0002193,5.46e-16,108;UBERON:0002390,2.35e-15,98;UBERON:0003061,2.35e-15,98;UBERON:0001474,2.90e-14,82;UBERON:0000926,1.65e-13,315;UBERON:0004120,1.65e-13,315;UBERON:0006603,1.65e-13,315;UBERON:0004765,4.19e-12,90;UBERON:0004872,5.76e-11,83;UBERON:0001434,7.60e-11,100;UBERON:0000055,1.49e-09,68;UBERON:0007500,1.60e-09,59;UBERON:0001981,1.60e-09,59;UBERON:0004537,1.60e-09,59;UBERON:0006965,1.60e-09,59;UBERON:0004638,1.79e-09,18;UBERON:0001986,1.79e-09,18;UBERON:0004852,1.79e-09,18;UBERON:0004535,3.26e-09,109;UBERON:0002204,4.39e-09,167;UBERON:0001009,9.45e-09,112;UBERON:0002049,3.78e-08,78;UBERON:0007798,3.78e-08,78;UBERON:0000487,8.15e-07,22 | |||
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| ||
|short_description=p4@WDR13 | |||
}} | }} |
Latest revision as of 19:31, 15 September 2015
Short description: | p4@WDR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_WDR13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001166426_5end |
EntrezGene: | WDR13 |
HGNC: | 14352 |
UniProt: | Q06DX0Q9H1Z4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.45e-27 | 203 |
bone marrow | 3.03e-17 | 76 |
immune system | 3.26e-16 | 93 |
hemolymphoid system | 5.46e-16 | 108 |
hematopoietic system | 2.35e-15 | 98 |
blood island | 2.35e-15 | 98 |
bone element | 2.90e-14 | 82 |
mesoderm | 1.65e-13 | 315 |
mesoderm-derived structure | 1.65e-13 | 315 |
presumptive mesoderm | 1.65e-13 | 315 |
skeletal element | 4.19e-12 | 90 |
splanchnic layer of lateral plate mesoderm | 5.76e-11 | 83 |
skeletal system | 7.60e-11 | 100 |
vessel | 1.49e-09 | 68 |
epithelial tube open at both ends | 1.60e-09 | 59 |
blood vessel | 1.60e-09 | 59 |
blood vasculature | 1.60e-09 | 59 |
vascular cord | 1.60e-09 | 59 |
blood vessel endothelium | 1.79e-09 | 18 |
endothelium | 1.79e-09 | 18 |
cardiovascular system endothelium | 1.79e-09 | 18 |
cardiovascular system | 3.26e-09 | 109 |
musculoskeletal system | 4.39e-09 | 167 |
circulatory system | 9.45e-09 | 112 |
vasculature | 3.78e-08 | 78 |
vascular system | 3.78e-08 | 78 |
simple squamous epithelium | 8.15e-07 | 22 |